CN181757

Overview
NameCN181757
Unique NameCN181757
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5436 contig Csv1_Contig5436:252..929. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181757 vs. ExPASy Swiss-Prot
Match: DLDH_MACFA (Dihydrolipoyl dehydrogenase, mitochondrial OS=Macaca fascicularis GN=DLD PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.700e-17
Identity = 44/117 (37.61%), Postives = 67/117 (57.26%), Query Frame = -1
Query:  325 IPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHAHPTLSEVLDELFKAA 675
            +P+  +THPE++ VG +E Q +E    EG E  V K  F AN++A    + +G+ K++ +     +LG HI G  A ++++EA+ A+  G   +DI    HAHPTLSE   E   AA
Sbjct:  389 VPSVIYTHPEVAWVGKSEEQLKE----EGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAA 501          
BLAST of CN181757 vs. ExPASy Swiss-Prot
Match: DLDH_HUMAN (Dihydrolipoyl dehydrogenase, mitochondrial OS=Homo sapiens GN=DLD PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 9.700e-17
Identity = 44/117 (37.61%), Postives = 67/117 (57.26%), Query Frame = -1
Query:  325 IPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHAHPTLSEVLDELFKAA 675
            +P+  +THPE++ VG +E Q +E    EG E  V K  F AN++A    + +G+ K++ +     +LG HI G  A ++++EA+ A+  G   +DI    HAHPTLSE   E   AA
Sbjct:  389 VPSVIYTHPEVAWVGKSEEQLKE----EGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAA 501          
BLAST of CN181757 vs. ExPASy Swiss-Prot
Match: DLDH_DICDI (Dihydrolipoyl dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=lpd PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.700e-17
Identity = 43/113 (38.05%), Postives = 66/113 (58.41%), Query Frame = -1
Query:  340 SIPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHAHPTLSEVLDE 678
            +IP+  +THPE++ VG TE    E+ +KEG + ++ +  F AN++A   ++ EG  K +   D+  +LG HI G +A +LI E   A+  G   +DI    H HPTLSE + E
Sbjct:  368 AIPSIIYTHPEVAWVGKTE----EELQKEGIQYNIGRFPFVANSRAKTNDDVEGFVKFLAAKDSDRVLGAHIMGTNAGELIGECVLAMEYGASCEDIARTCHGHPTLSEAVKE 476          
BLAST of CN181757 vs. ExPASy Swiss-Prot
Match: DLDH_CRIGR (Dihydrolipoyl dehydrogenase, mitochondrial OS=Cricetulus griseus GN=DLD PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.700e-17
Identity = 44/117 (37.61%), Postives = 67/117 (57.26%), Query Frame = -1
Query:  325 IPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHAHPTLSEVLDELFKAA 675
            +P+  +THPE++ VG +E Q +E    EG E  V K  F AN++A    + +G+ K++ +     +LG HI G  A ++++EA+ A+  G   +DI    HAHPTLSE   E   AA
Sbjct:  389 VPSVIYTHPEVAWVGKSEEQLKE----EGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAA 501          
BLAST of CN181757 vs. ExPASy Swiss-Prot
Match: DLDH_CANFA (Dihydrolipoyl dehydrogenase, mitochondrial OS=Canis familiaris GN=DLD PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.700e-17
Identity = 44/117 (37.61%), Postives = 67/117 (57.26%), Query Frame = -1
Query:  325 IPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHAHPTLSEVLDELFKAA 675
            +P+  +THPE++ VG +E Q +E    EG E  V K  F AN++A    + +G+ K++ +     +LG HI G  A ++++EA+ A+  G   +DI    HAHPTLSE   E   AA
Sbjct:  389 VPSVIYTHPEVAWVGKSEEQLKE----EGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAA 501          
BLAST of CN181757 vs. ExPASy Swiss-Prot
Match: DLDH2_PSEAE (Dihydrolipoamide dehydrogenase OS=Pseudomonas aeruginosa GN=lpdG PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.700e-17
Identity = 49/123 (39.84%), Postives = 70/123 (56.91%), Query Frame = -1
Query:  307 IPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHAHPTLSEVLDELFKAAKVKDHA 675
            IP+  +THPEI+ VG TE    +  + EG EV+V    F A+ +A+A N+  GL K+I       +LGVH+ G  AA+L+ + +  +  GT  +D+   V +HPTLSE L E   A  V  HA
Sbjct:  353 IPSVIYTHPEIAWVGKTE----QTLKAEGVEVNVGTFPFAASGRAMAANDTTGLVKVIADAKTDRVLGVHVIGPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHE--AALAVNGHA 469          
BLAST of CN181757 vs. ExPASy Swiss-Prot
Match: DLDH_RAT (Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Dld PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.655e-16
Identity = 44/117 (37.61%), Postives = 66/117 (56.41%), Query Frame = -1
Query:  325 IPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHAHPTLSEVLDELFKAA 675
            +P+  +THPE++ VG +E Q +E    EG E  V K  F AN++A    + +G+ K++       ILG HI G  A ++++EA+ A+  G   +D+    HAHPTLSE   E   AA
Sbjct:  389 VPSVIYTHPEVAWVGKSEEQLKE----EGVEFKVGKFPFAANSRAKTNADTDGMVKILGHKSTDRILGAHILGPGAGEMVNEAALALEYGASCEDVARVCHAHPTLSEAFREANLAA 501          
BLAST of CN181757 vs. ExPASy Swiss-Prot
Match: DLDH_MOUSE (Dihydrolipoyl dehydrogenase, mitochondrial OS=Mus musculus GN=Dld PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.655e-16
Identity = 43/117 (36.75%), Postives = 66/117 (56.41%), Query Frame = -1
Query:  325 IPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHAHPTLSEVLDELFKAA 675
            +P+  +THPE++ VG +E Q +E    EG E  + K  F AN++A    + +G+ K++       +LG HI G  A ++++EA+ A+  G   +DI    HAHPTLSE   E   AA
Sbjct:  389 VPSVIYTHPEVAWVGKSEEQLKE----EGIEFKIGKFPFAANSRAKTNADTDGMVKILGHKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAA 501          
BLAST of CN181757 vs. ExPASy Swiss-Prot
Match: DLDH_STAAW (Dihydrolipoyl dehydrogenase OS=Staphylococcus aureus (strain MW2) GN=pdhD PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.161e-16
Identity = 44/117 (37.61%), Postives = 67/117 (57.26%), Query Frame = -1
Query:  325 IPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHAHPTLSEVLDELFKAA 675
            +PA CFT PE++ VG +E QA+E    EG  +  +K  + AN +AL+ ++  G  KLI   ++  ++G  + G  A+D+I E   AI  G   +DI   +HAHPTL E+  E  + A
Sbjct:  348 MPAVCFTEPELATVGYSEAQAKE----EGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGLAIEAGMNAEDIALTIHAHPTLGEMTMEAAEKA 460          
BLAST of CN181757 vs. ExPASy Swiss-Prot
Match: DLDH_STAAU (Dihydrolipoyl dehydrogenase OS=Staphylococcus aureus GN=pdhD PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.161e-16
Identity = 44/117 (37.61%), Postives = 67/117 (57.26%), Query Frame = -1
Query:  325 IPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHAHPTLSEVLDELFKAA 675
            +PA CFT PE++ VG +E QA+E    EG  +  +K  + AN +AL+ ++  G  KLI   ++  ++G  + G  A+D+I E   AI  G   +DI   +HAHPTL E+  E  + A
Sbjct:  348 MPAVCFTEPELATVGYSEAQAKE----EGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGLAIEAGMNAEDIALTIHAHPTLGEMTMEAAEKA 460          
The following BLAST results are available for this feature:
BLAST of CN181757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
DLDH_MACFA9.700e-1737.61Dihydrolipoyl dehydrogenase, mitochondrial OS=Maca... [more]
DLDH_HUMAN9.700e-1737.61Dihydrolipoyl dehydrogenase, mitochondrial OS=Homo... [more]
DLDH_DICDI9.700e-1738.05Dihydrolipoyl dehydrogenase, mitochondrial OS=Dict... [more]
DLDH_CRIGR9.700e-1737.61Dihydrolipoyl dehydrogenase, mitochondrial OS=Cric... [more]
DLDH_CANFA9.700e-1737.61Dihydrolipoyl dehydrogenase, mitochondrial OS=Cani... [more]
DLDH2_PSEAE9.700e-1739.84Dihydrolipoamide dehydrogenase OS=Pseudomonas aeru... [more]
DLDH_RAT1.655e-1637.61Dihydrolipoyl dehydrogenase, mitochondrial OS=Ratt... [more]
DLDH_MOUSE1.655e-1636.75Dihydrolipoyl dehydrogenase, mitochondrial OS=Mus ... [more]
DLDH_STAAW2.161e-1637.61Dihydrolipoyl dehydrogenase OS=Staphylococcus aure... [more]
DLDH_STAAU2.161e-1637.61Dihydrolipoyl dehydrogenase OS=Staphylococcus aure... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001G24_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001G24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181757 ID=CN181757; Name=CN181757; organism=Citrus sinensis; type=EST; length=678bp
TCTTATTTCAGCAATATTGTCCAGGATTGAAAGCAGAAAATAAATTTCCA
ATTAGAAACTATTATGAATATTAGTACTTCTGCAAAGCATACACAAGGCA
GAGAAACCAGGATACAAATGTCATATAAACATCTGCAAGTTTCTTCACCA
GGTTTGGTTTGCTAGGACGGTCACGGTGTTGATTAGTTCTCTCTGAGGAT
GCAAAATTCCTTGGTACTCCCTAGCACAAGCAAATTTCTTCAAAATTTAA
TATTTCCCAAGCGTCGAGATGCTTTAGACTGCAACTGGTTCACTTACTGG
ATTAGAAGCATGATCTTTAACCTTTGCTGCTTTAAACAGTTCGTCTAGAA
CTTCAGAGAGAGTTGGATGTGCATGAACCGCAAATTTTATGTCCTGAATA
CGTGTGCCTAATGCAATAGCATTAGATGCTTCATGGATAAGGTCTGCAGC
ATGCAGCCCAAAGATATGAACTCCAAGAATCTCACCGTTGTCTGGTCTGT
ATATTAACTTAGCAAGTCCCTCCCCTTCGTTTTCTGCTAAGGCCTTGGTG
TTAGCTTTGAAGCTTGTTTTCGCTACACTTACTTCAAATCCCTCCTTTTC
AGCCTTTTCCCTTGCCTGAGGCTCGGTCAATCCAACCATACTAATTTCAG
GATGTGTGAAACAAGCTGCTGGTATGCT
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