CN188705
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CSLD6_ARATH (Putative cellulose synthase-like protein D6 OS=Arabidopsis thaliana GN=CSLD6 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.978e-23 Identity = 48/84 (57.14%), Postives = 59/84 (70.24%), Query Frame = 3 Query: 333 EFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 + P +DV + TAD KEPPL NT LS+++ DYP EKLSVY+SDDGGS +T A EAA FA W+PFCRK + RNP +YF Sbjct: 202 DLPGIDVFVSTADAEKEPPLVTANTILSILSVDYPVEKLSVYISDDGGSLVTFEAIAEAASFAKIWVPFCRKHKIEPRNPESYF 285
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 9.978e-23 Identity = 70/199 (35.18%), Postives = 97/199 (48.74%), Query Frame = 3 Query: 36 GKSSGTEIPPLNTTEPIRR-----TALNRVFAVVYTCAIFALLYHHVETLTIRGRNPXXXXXXXXXXXXXXIL--ALMWATTQAFRMRPIHRREFPGNL-QKVVRPR--------EFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 G G +P +P+ R T++ + + +F LL++ LT R RNP L A W ++ P++R L +K P + P LDV + TADP KEP L+ T LS++A DYP EKL+ YVSDDGG+ LT A EAA FA W+PFC+K ++ RNP +YF Sbjct: 266 GGGGGGPLPEQKPFKPLTRKIPMPTSVISPYRIFIVIRMFVLLFY----LTWRIRNPNMEALWLWGMSIVCELWFAFSWLLDMLPKVNPVNRSTDLAVLKEKFETPSPSNPHGRSDLPGLDVFVSTADPEKEPVLTTATTILSILAVDYPVEKLACYVSDDGGALLTFEAMAEAASFANVWVPFCKKHDIEPRNPDSYF 460
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CSLD4_ARATH (Cellulose synthase-like protein D4 OS=Arabidopsis thaliana GN=CSLD4 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.702e-22 Identity = 47/84 (55.95%), Postives = 60/84 (71.43%), Query Frame = 3 Query: 333 EFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 + P +D+ + TADP KEPPL NT LS++A DYP EK+S Y+SDDGG+ L+ A EAA FA W+PFCRK N+ RNP +YF Sbjct: 352 DLPGIDLFVSTADPEKEPPLVTANTILSILAVDYPVEKVSCYLSDDGGALLSFEAMAEAASFADLWVPFCRKHNIEPRNPDSYF 435
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CSLF7_ORYSJ (Probable mixed-linked glucan synthase 7 OS=Oryza sativa subsp. japonica GN=CSLF7 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.223e-22 Identity = 53/115 (46.09%), Postives = 71/115 (61.74%), Query Frame = 3 Query: 240 ALMWATTQAFRMRPIHRREFPGNLQKVVRPREFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 A MW Q + P+ R ++ + PA+DV + TADP KEPPL+ NT LS++A YP K++ YVSDD G+ +T A +EAA+FAA W+PFCRK + RNP AYF Sbjct: 113 AFMWVLDQLPKTMPVRRAV---DVTALNDDTLLPAMDVFVTTADPDKEPPLATANTVLSILAAGYPAGKVTCYVSDDAGAEVTRGAVVEAARFAALWVPFCRKHGVEPRNPEAYF 224
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.223e-22 Identity = 64/181 (35.36%), Postives = 91/181 (50.28%), Query Frame = 3 Query: 63 PLNTTEPIRRTALNRVFAVVYT-CAIFALLYHHVETLTIRGRNPXXXXXXXXXXXXXXIL--ALMWATTQAFRMRPIHRREFPGNL----QKVVRPREFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 PL+ PIR + +N +++ AI L +H+ R +P + A+ W Q + PI R + L +K +P E +DV + T DP KEPPL NT LS++A DYP EK++ YVSDDG + LT A A+FA W+PFC+KF++ R P YF Sbjct: 266 PLSRKLPIRSSRINPYRMLIFCRLAILGLFFHY------RILHPVNDAFGLWLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSLRYEKEGKPSELAPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVEKVACYVSDDGAAMLTFEALSYTAEFARKWVPFCKKFSIEPRAPEWYF 440
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.223e-22 Identity = 59/179 (32.96%), Postives = 87/179 (48.60%), Query Frame = 3 Query: 63 PLNTTEPIRRTALNRV-FAVVYTCAIFALLYHHVETLTIRGRNPXXXXXXXXXXXXXXILALMWATTQAFRMRPIHRREFPGNL----QKVVRPREFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 PL+ PI + +N +V + + H+ T +R P AL W Q + PI+R + L + P + +D+ + T DP KEPPL NT LS++A DYP +K+S YVSDDG + LT A E ++FA W+PFC+K+++ R P YF Sbjct: 253 PLSRKVPISSSRINPYRMVIVLRLIVLCIFLHYRITNPVRNAYPLWLLSVICEIW----FALSWILDQFPKWSPINRETYLDRLALRYDREGEPSQLAPVDIFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFDALAETSEFARKWVPFCKKYSIEPRAPEWYF 427
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.223e-22 Identity = 59/179 (32.96%), Postives = 87/179 (48.60%), Query Frame = 3 Query: 63 PLNTTEPIRRTALNRV-FAVVYTCAIFALLYHHVETLTIRGRNPXXXXXXXXXXXXXXILALMWATTQAFRMRPIHRREFPGNL----QKVVRPREFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 PL+ PI + +N +V + + H+ T +R P AL W Q + PI+R + L + P + +D+ + T DP KEPPL NT LS++A DYP +K+S YVSDDG + LT A E ++FA W+PFC+K+++ R P YF Sbjct: 253 PLSRKVPISSSRINPYRMVIVLRLIVLCIFLHYRITNPVRNAYPLWLLSVICEIW----FALSWILDQFPKWSPINRETYLDRLALRYDREGEPSQLAPVDIFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFDALAETSEFARKWVPFCKKYSIEPRAPEWYF 427
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 3.792e-22 Identity = 66/205 (32.20%), Postives = 95/205 (46.34%), Query Frame = 3 Query: 12 KHIKKEMRGKSSGTEIP-------PLNTTEPIRRTALNRV-FAVVYTCAIFALLYHHVETLTIRGRNPXXXXXXXXXXXXXXIL--ALMWATTQAFRMRPIHRREFPGNL----QKVVRPREFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 KH G +IP PL+ PI+ + +N +V I L +H+ R +P + A+ W Q + PI R + L +K +P E +DV + T DP KEPPL NT LS++A DYP ++++ YVSDDG + LT A E A+FA W+PFC+K+ + R P YF Sbjct: 224 KHDGDSSLGDGDDADIPMMDEGRQPLSRKVPIKSSKINPYRMLIVLRLVILGLFFHY------RILHPVNDAYALWLISVICEIWFAVSWVLDQFPKWYPIERETYLDRLSLRYEKEGKPSELAGVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDRVACYVSDDGAAMLTFEALSETAEFARKWVPFCKKYTIEPRAPEWYF 422
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.792e-22 Identity = 52/119 (43.70%), Postives = 68/119 (57.14%), Query Frame = 3 Query: 240 ALMWATTQAFRMRPIHRREFPGNL----QKVVRPREFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 AL W Q + PI+R + L + P + +DV + T DP KEPPL NT LS++A DYP +K+S YVSDDG + LT A E A+FA W+PFC+K N+ R P YF Sbjct: 312 ALSWLLDQFPKWYPINRETYLDRLALRYDREGEPSQLAPIDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYF 430
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.792e-22 Identity = 52/119 (43.70%), Postives = 68/119 (57.14%), Query Frame = 3 Query: 240 ALMWATTQAFRMRPIHRREFPGNL----QKVVRPREFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 AL W Q + PI+R + L + P + +DV + T DP KEPPL NT LS++A DYP +K+S YVSDDG + LT A E A+FA W+PFC+K N+ R P YF Sbjct: 312 ALSWLLDQFPKWYPINRETYLDRLALRYDREGEPSQLAPIDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYF 430 The following BLAST results are available for this feature:
BLAST of CN188705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188705 ID=CN188705; Name=CN188705; organism=Citrus sinensis; type=EST; length=719bpback to top |