CN188705
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CSLB1_ARATH (Cellulose synthase-like protein B1 OS=Arabidopsis thaliana GN=CSLB1 PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 4.952e-22 Identity = 49/102 (48.04%), Postives = 68/102 (66.67%), Query Frame = 3 Query: 279 PIHRREFPGNLQKVVRPREFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 P + FP L + R + P++D+ + TADP +EPP+ VV+T LS++A +YP KL+ YVSDDG S LT F+ EA+KFA W+PFC+K+N R P YF Sbjct: 75 PADTKPFPDRLDE--RVHDLPSVDMFVPTADPVREPPIMVVDTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNTRVRAPSRYF 174
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.952e-22 Identity = 59/179 (32.96%), Postives = 88/179 (49.16%), Query Frame = 3 Query: 63 PLNTTEPIRRTALNRV-FAVVYTCAIFALLYHHVETLTIRGRNPXXXXXXXXXXXXXXILALMWATTQAFRMRPIHRREFPGNL----QKVVRPREFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 PL+ P+ + +N +V + ++ H+ T +R P AL W Q + PI+R + L + P + A+D+ + T DP KEPPL NT LS++A DYP +K+S YVSDDG + LT A E ++FA W+PF +K+N+ R P YF Sbjct: 260 PLSRKVPLPSSRINPYRMVIVLRLVVLSIFLHYRITNPVRNAYPLWLLSVICEIW----FALSWILDQFPKWFPINRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFDALAETSEFARKWVPFVKKYNIEPRAPEWYF 434
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CESA2_ARATH (Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.952e-22 Identity = 63/181 (34.81%), Postives = 90/181 (49.72%), Query Frame = 3 Query: 63 PLNTTEPIRRTALNRV-FAVVYTCAIFALLYHHVETLTIRGRNPXXXXXXXXXXXXXXIL--ALMWATTQAFRMRPIHRREFPGNL----QKVVRPREFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 PL+ PIR + +N ++ AI L +H+ R +P + A+ W Q + PI R + L +K +P +DV + T DP KEPPL NT LS++A DYP +K++ YVSDDG + LT A + A+FA W+PFC+KFN+ R P YF Sbjct: 261 PLSRKLPIRSSRINPYRMLILCRLAILGLFFHY------RILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSLRYEKEGKPSGLAPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSDTAEFARKWVPFCKKFNIEPRAPEWYF 435
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CESAA_ARATH (Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.468e-22 Identity = 51/119 (42.86%), Postives = 68/119 (57.14%), Query Frame = 3 Query: 240 ALMWATTQAFRMRPIHRREFPGNL----QKVVRPREFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 A W Q + PI+R F L + P + +DV + T DP KEPPL NT LS++A DYP +K++ YVSDDG + LT A E A+F+ W+PFC+KFN+ R P YF Sbjct: 302 AFSWLLDQFPKWYPINRETFLDRLALRYDRDGEPSQLAPVDVFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVACYVSDDGSAMLTFEALSETAEFSKKWVPFCKKFNIEPRAPEFYF 420
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.468e-22 Identity = 52/119 (43.70%), Postives = 68/119 (57.14%), Query Frame = 3 Query: 240 ALMWATTQAFRMRPIHRREFPGNL----QKVVRPREFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 A+ W Q + PI R + L ++ P +DV + T DP KEPPL NT LS++A DYP EK+S YVSDDG S LT + E A+FA W+PFC+KF++ R P YF Sbjct: 278 AVSWILDQFPKWFPIERETYLDRLSLRYEREGEPNMLAPVDVFVSTVDPLKEPPLVTSNTVLSILAMDYPVEKISCYVSDDGASMLTFESLSETAEFARKWVPFCKKFSIEPRAPEMYF 396
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.447e-22 Identity = 56/124 (45.16%), Postives = 72/124 (58.06%), Query Frame = 3 Query: 240 ALMWATTQAFRMRPIHRREFPGNLQ-KVVRPR--------EFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 AL W Q ++ PI+R L+ K P + P +D+ + TADP KEP L NT LS++A DYP +KL+ YVSDDGG+ LT A EAA FA W+PFCRK + RNP +YF Sbjct: 307 ALSWVLDQLPKLCPINRATDLSVLKDKFETPTPSNPTGKSDLPGIDIFVSTADPEKEPVLVTANTILSILAADYPVDKLACYVSDDGGALLTFEAMAEAASFANLWVPFCRKHEIEPRNPDSYF 430
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 8.447e-22 Identity = 56/124 (45.16%), Postives = 72/124 (58.06%), Query Frame = 3 Query: 240 ALMWATTQAFRMRPIHRREFPGNLQ-KVVRPR--------EFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 AL W Q ++ PI+R L+ K P + P +D+ + TADP KEP L NT LS++A DYP +KL+ YVSDDGG+ LT A EAA FA W+PFCRK + RNP +YF Sbjct: 307 ALSWVLDQLPKLCPINRATDLSVLKDKFETPTPSNPTGKSDLPGIDIFVSTADPEKEPVLVTANTILSILAADYPVDKLACYVSDDGGALLTFEAMAEAASFANLWVPFCRKHEIEPRNPDSYF 430
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.447e-22 Identity = 51/119 (42.86%), Postives = 68/119 (57.14%), Query Frame = 3 Query: 240 ALMWATTQAFRMRPIHRREFPGNLQ----KVVRPREFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 A+ W Q + PI R + L K +P + +D + T DP KEPPL NT LS+++ DYP EK+S YVSDDG + LT A E ++FA W+PFC+KFN+ R P YF Sbjct: 319 AMSWILDQFPKWLPIERETYLDRLSLRFDKEGQPSQLAPVDFFVSTVDPSKEPPLVTANTVLSILSVDYPVEKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKKFNIEPRAPEWYF 437
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSJ (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.441e-21 Identity = 51/119 (42.86%), Postives = 69/119 (57.98%), Query Frame = 3 Query: 240 ALMWATTQAFRMRPIHRREFPGNL----QKVVRPREFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 A+ W Q + PI R + L ++ P A+D+ + T DP KEPPL NT LS++A DYP +K+S YVSDDG S LT + E A+FA W+PFC+KF++ R P YF Sbjct: 307 AVSWILDQFPKWYPIDRETYLDRLSLRYEREGEPSLLSAVDLFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGASMLTFESLSETAEFARKWVPFCKKFSIEPRAPEFYF 425
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSI (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.441e-21 Identity = 51/119 (42.86%), Postives = 69/119 (57.98%), Query Frame = 3 Query: 240 ALMWATTQAFRMRPIHRREFPGNL----QKVVRPREFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 A+ W Q + PI R + L ++ P A+D+ + T DP KEPPL NT LS++A DYP +K+S YVSDDG S LT + E A+FA W+PFC+KF++ R P YF Sbjct: 307 AVSWILDQFPKWYPIDRETYLDRLSLRYEREGEPSLLSAVDLFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGASMLTFESLSETAEFARKWVPFCKKFSIEPRAPEFYF 425 The following BLAST results are available for this feature:
BLAST of CN188705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188705 ID=CN188705; Name=CN188705; organism=Citrus sinensis; type=EST; length=719bpback to top |