CN188705
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSI (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.906e-20 Identity = 48/119 (40.34%), Postives = 67/119 (56.30%), Query Frame = 3 Query: 240 ALMWATTQAFRMRPIHRREFPGNL----QKVVRPREFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 A+ W Q + PI R + L K + + +D + T DP KEPPL NT LS++A DYP +K+S YVSDDG + LT A E ++FA W+PFC++++L R P YF Sbjct: 318 AMSWILDQFPKWFPIERETYLDRLTLRFDKEGQQSQLAPVDFFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKRYSLEPRAPEWYF 436
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.906e-20 Identity = 48/119 (40.34%), Postives = 66/119 (55.46%), Query Frame = 3 Query: 240 ALMWATTQAFRMRPIHRREFPGNL----QKVVRPREFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 AL W Q + PI+R + L ++ + +DV + T DP KEPP+ NT LS++A DYP K+S YVSDDG S L E ++FA W+PFC+K+N+ R P YF Sbjct: 255 ALSWILDQFPKWFPINRETYLDRLSMRFERDGEKNKLAPVDVFVSTVDPLKEPPIITANTILSILAVDYPVNKVSCYVSDDGASMLLFDTLSETSEFARRWVPFCKKYNVEPRAPEFYF 373
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CSLF6_ORYSJ (Probable mixed-linked glucan synthase 6 OS=Oryza sativa subsp. japonica GN=CSLF6 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.761e-19 Identity = 59/178 (33.15%), Postives = 85/178 (47.75%), Query Frame = 3 Query: 63 PLNTTEPIRRTALNRVFAVVYTCAIFALLYHHVETLTIRGRNPXXXXXXXXXXXXXXILALMWATTQAFRMRPIHRREFPGNLQKVVRPRE----FPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 P+ TE I+ L+ +++ I L+ I +NP W Q ++ PI+R L++ + P LD+ + TADP KEP LS N+ LS++A DYP ++ + Y+SDD G LT A EAAKFA W+PFCRK + R P +YF Sbjct: 91 PVFRTEKIKGVLLHPYRVLIFVRLIAFTLF---VIWRIEHKNPDAMWLWVTSIAGEFWFGFSWLLDQLPKLNPINRVPDLAVLRRRFDHADGTSSLPGLDIFVTTADPIKEPILSTANSILSILAADYPVDRNTCYLSDDSGMLLTYEAMAEAAKFATLWVPFCRKHAIEPRGPESYF 265
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CSLB5_ARATH (Cellulose synthase-like protein B5 OS=Arabidopsis thaliana GN=CSLB5 PE=2 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.761e-19 Identity = 47/115 (40.87%), Postives = 67/115 (58.26%), Query Frame = 3 Query: 240 ALMWATTQAFRMRPIHRREFPGNLQKVVRPREFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 +L+W + P + L + R + P+LD+ + TAD +E P+ VNT LS++A +YP KL+ YVSDDG S LT F+ EA+KF W PFC+K+N+ R P YF Sbjct: 62 SLVWLIFTCLKWSPAEDIPYINTLNE--RVHDLPSLDMFVPTADTVRESPIITVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFVKIWAPFCKKYNVRVRAPFRYF 174
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSJ (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.761e-19 Identity = 49/115 (42.61%), Postives = 64/115 (55.65%), Query Frame = 3 Query: 249 WATTQAFRMRPIHRREFPGNLQKVVRPREFPAL---DVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 W Q + PI+R + L E L D + T DP KEPPL NT LS++A DYP EK+S YVSDDG + LT + E A+FA W+PFC+K+++ R P YF Sbjct: 232 WILDQFPKWCPINRETYVDRLIARYGDGEDSGLAPVDFFVSTVDPLKEPPLITANTVLSILAVDYPVEKISCYVSDDGSAMLTFESLAETAEFARRWVPFCKKYSIEPRAPEFYF 346
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.761e-19 Identity = 49/115 (42.61%), Postives = 64/115 (55.65%), Query Frame = 3 Query: 249 WATTQAFRMRPIHRREFPGNLQKVVRPREFPAL---DVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 W Q + PI+R + L E L D + T DP KEPPL NT LS++A DYP EK+S YVSDDG + LT + E A+FA W+PFC+K+++ R P YF Sbjct: 232 WILDQFPKWCPINRETYVDRLIARYGDGEDSGLAPVDFFVSTVDPLKEPPLITANTVLSILAVDYPVEKISCYVSDDGSAMLTFESLAETAEFARRWVPFCKKYSIEPRAPEFYF 346
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CSLF8_ORYSJ (Probable mixed-linked glucan synthase 8 OS=Oryza sativa subsp. japonica GN=CSFL8 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18 Identity = 48/116 (41.38%), Postives = 66/116 (56.90%), Query Frame = 3 Query: 249 WATTQAFRMRPIHRREFPGNLQKVVRPRE----FPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 W Q +++PI R LQ+ + P LDV I T DP EP + +N LS++A DYP +K + Y+SDDGGS + +E AKFAA W+PFCRK ++ R P +YF Sbjct: 136 WLLNQVAKLKPIRRVPDLNLLQQQFDLPDGNSNLPGLDVFINTVDPINEPMIYTMNAILSILAADYPVDKHACYLSDDGGSIIHYDGLLETAKFAALWVPFCRKHSIEPRAPESYF 251
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CSLF9_ORYSJ (Probable mixed-linked glucan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLF9 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.665e-18 Identity = 44/112 (39.29%), Postives = 63/112 (56.25%), Query Frame = 3 Query: 249 WATTQAFRMRPIHRREFPGNLQKVVRPREFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 W QA ++ P+ R L++ P +DV I T DP EP L +N+ LS++A DYP ++ + Y+SDDG S +E A+FAA W+PFCRK + R P +YF Sbjct: 122 WLLNQASKLNPVKRVPDLSLLRRRFDDGGLPGIDVFINTVDPVDEPMLYTMNSILSILATDYPADRHAAYLSDDGASLAHYEGLIETARFAALWVPFCRKHRVEPRAPESYF 233
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CSLF2_ORYSJ (Mixed-linked glucan synthase 2 OS=Oryza sativa subsp. japonica GN=CSLF2 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.812e-17 Identity = 40/84 (47.62%), Postives = 55/84 (65.48%), Query Frame = 3 Query: 333 EFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 + P +DV + T DP EP L VNT LS++A DYP ++ + Y+SDDGG+ + A +E AKFA W+PFCRK + R+P YF Sbjct: 168 DLPGVDVFVTTVDPVDEPILYTVNTILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKHCVEPRSPENYF 251
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CSLF1_ORYSJ (Putative mixed-linked glucan synthase 1 OS=Oryza sativa subsp. japonica GN=CSFL1 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.812e-17 Identity = 40/84 (47.62%), Postives = 55/84 (65.48%), Query Frame = 3 Query: 333 EFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 + P +DV + T DP EP L VNT LS++A DYP ++ + Y+SDDGG+ + A +E AKFA W+PFCRK + R+P YF Sbjct: 138 DLPGVDVFVTTVDPVDEPILYTVNTILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKHCVEPRSPENYF 221 The following BLAST results are available for this feature:
BLAST of CN188705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188705 ID=CN188705; Name=CN188705; organism=Citrus sinensis; type=EST; length=719bpback to top |