CN188705
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CSLF4_ORYSJ (Mixed-linked glucan synthase 4 OS=Oryza sativa subsp. japonica GN=CSLF4 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.673e-17 Identity = 40/84 (47.62%), Postives = 55/84 (65.48%), Query Frame = 3 Query: 333 EFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 E P +DV + T DP EP L VN+ LS++A DYP ++ + Y+SDDGG+ + A +E AKFA W+PFCRK + R P +YF Sbjct: 174 ELPGVDVFVTTVDPVDEPILYTVNSILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKHCVEPRAPESYF 257
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSJ (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. japonica GN=CSLF3 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.182e-17 Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 3 Query: 339 PALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 P +DV + TADP EP L +N LS++A DYP ++ + Y+SDD G+ + A +E AKFA W+PFCRK + R+P +YF Sbjct: 168 PGIDVFVTTADPIDEPVLYTMNCVLSILAADYPVDRSACYLSDDSGALILYEALVETAKFATLWVPFCRKHCIEPRSPESYF 249
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSI (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. indica GN=CSLF3 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.182e-17 Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 3 Query: 339 PALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 P +DV + TADP EP L +N LS++A DYP ++ + Y+SDD G+ + A +E AKFA W+PFCRK + R+P +YF Sbjct: 168 PGIDVFVTTADPIDEPVLYTMNCVLSILAADYPVDRSACYLSDDSGALILYEALVETAKFATLWVPFCRKHCIEPRSPESYF 249
BLAST of CN188705 vs. ExPASy Swiss-Prot
Match: CESAB_ORYSJ (Putative cellulose synthase A catalytic subunit 11 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA11 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.396e-16 Identity = 45/120 (37.50%), Postives = 61/120 (50.83%), Query Frame = 3 Query: 237 LALMWATTQAFRMRPIHRREFPGNL----QKVVRPREFPALDVLICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTLFAFMEAAKFAAHWLPFCRKFNLMERNPHAYF 584 LA W Q ++ P +R + L +K +DV + AD +EPPL+ NT LSV+A DYP ++ YV DDG L + EAA FA W+PFCR+ + R P YF Sbjct: 87 LAASWLIAQLPKLSPANRVTYLDRLASRYEKGGEASRLAGVDVFVAAADAAREPPLATANTVLSVLAADYPAGGVACYVHDDGADMLVFESLFEAAGFARRWIPFCRRHGVEPRAPELYF 206 The following BLAST results are available for this feature:
BLAST of CN188705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188705 ID=CN188705; Name=CN188705; organism=Citrus sinensis; type=EST; length=719bpback to top |