CN181747
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181747 vs. ExPASy Swiss-Prot
Match: SODCP_ORYSJ (Superoxide dismutase [Cu-Zn], chloroplastic OS=Oryza sativa subsp. japonica GN=SODCP PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.619e-11 Identity = 45/125 (36.00%), Postives = 70/125 (56.00%), Query Frame = -1 Query: 111 AVAEFKGPD-VFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNPK--IEGSVKEPL---GDLGTLVADEKGEAFFSGVKEVLRVA---DLIGRSIVVYGTEDKSDSG 458 AVA KG V GVV L Q + + +GL+PG HG+ ++EFGD T G +STG +NP G+ ++ + GDLG +VA+ +G A + V + + ++ ++GR+ VV+ ED G Sbjct: 62 AVAVLKGTSQVEGVVTLTQDDQGPTTVNVRVTGLTPGLHGFHLHEFGDTTNGCISTGPHFNPNNLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDKQIPLSGPNSVVGRAFVVHELEDDLGKG 186
BLAST of CN181747 vs. ExPASy Swiss-Prot
Match: CCS_DICDI (Probable copper chaperone for superoxide dismutase OS=Dictyostelium discoideum GN=ccs PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.619e-11 Identity = 51/187 (27.27%), Postives = 78/187 (41.71%), Query Frame = -1 Query: 36 VFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNPKIEGS------------------------------VKEPLGDL-GTLVADEKGEAFFSGVKEVLRVADLIGRSIVVYGTEDK------------------SDSG------VTAAVIARSAGVGENYKKICACDGT 431 V+GV+RL + + E +GL PGKH ++EFG+L G G + +E + KE L + GT + G+A F + + DLIGRSIV++ + K S+S V +I+R+A +G+N+KK+C CDGT Sbjct: 127 VYGVIRLLRASTTKTLFEGRITGLKPGKHSLVVHEFGNLMNGCDDLGEPFISNVENNNNNNNNNNNNNNNNNNNNNNNNNNNKNINKCKEILNKIIGTSDVKQDGKAEFRVLSDKYDFWDLIGRSIVLHSQDSKYSPIEDLNNNNNNKNIVNSESDKILGERVACGIISRAASIGQNHKKVCPCDGT 313
BLAST of CN181747 vs. ExPASy Swiss-Prot
Match: SODC_ONCVO (Superoxide dismutase [Cu-Zn] OS=Onchocerca volvulus GN=sod-1 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.608e-11 Identity = 44/128 (34.38%), Postives = 66/128 (51.56%), Query Frame = -1 Query: 102 AVAEFKGPDVFGVVRLAQVNMEL-ARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KIEGSVKEPL---GDLGTLVADEKGEAFFSGVKEVLRVA---DLIGRSIVVYGTEDKSDSGVTA 458 A+A +G V G++R Q L + GL+PG HG+ I+++GD T G +S G +NP K G + + GDLG + A G A S + +++ +IGRSIVV+ +D GV A Sbjct: 5 AIAVLRGDTVSGIIRFKQDKEGLPTTVTGEVKGLTPGLHGFHIHQYGDTTNGCISAGPHFNPYNKTHGDRTDEIRHVGDLGNIEAGADGTAHISISDQHIQLLGPNSIIGRSIVVHADQDDLGKGVGA 132
BLAST of CN181747 vs. ExPASy Swiss-Prot
Match: SODC_HALRO (Superoxide dismutase [Cu-Zn] OS=Halocynthia roretzi PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 3.608e-11 Identity = 40/115 (34.78%), Postives = 62/115 (53.91%), Query Frame = -1 Query: 111 VFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KIEGSVKEPL---GDLGTLVADEKGEAFFSGVKEVLRVA---DLIGRSIVVYGTEDKSDSG 431 V G + Q + + SGL PGKHG+ I+E+GDLT G S+G +NP +I G+ ++ + GDLG + AD G A + ++ + +IGR++VV+ ED G Sbjct: 13 VKGTLNFKQDAIGSCTVTGEVSGLIPGKHGFHIHEYGDLTNGCTSSGGHFNPFKQIHGAPEDDIRHVGDLGNITADSSGVATVNITDRMISLTGEHSIIGRAVVVHAGEDDLGKG 127
BLAST of CN181747 vs. ExPASy Swiss-Prot
Match: CCS1_CANGA (Superoxide dismutase 1 copper chaperone OS=Candida glabrata GN=CCS1 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.608e-11 Identity = 49/144 (34.03%), Postives = 76/144 (52.78%), Query Frame = -1 Query: 24 KGPDVFGVVRLAQVNMELARIEANFSGLS-PGKHGWSINEFGDLTKGAVSTGRVYNPKIEGSVKEPLGDLGTLVADEKGEAFFSG---VKEVLRVADLIGRSIVVYGTEDKSDSGVTAAVIARSAGVGENYKKICACDGTIIWE 443 K V G+ R+ QV+ + + +G+ GK+ I+ G++++G STG VY +EP+ A + ++ +SG V L + DLIGRS V++ + + A VIARSAGV EN K++CAC G +WE Sbjct: 95 KDTAVRGLARIVQVSDQKTLFDVTVNGVPFSGKYQAKIHSNGNISEGVKSTGDVYY-----KFEEPIECSD---ASDLDKSLYSGQNFVSAPLPIWDLIGRSFVIFREGEPAYD--IAGVIARSAGVWENDKQVCACTGKTVWE 228
BLAST of CN181747 vs. ExPASy Swiss-Prot
Match: SODC_SCHMA (Superoxide dismutase [Cu-Zn] OS=Schistosoma mansoni GN=SOD PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.712e-11 Identity = 42/116 (36.21%), Postives = 62/116 (53.45%), Query Frame = -1 Query: 111 VFGVVRLAQ-VNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP-KIEGSVKEP----LGDLGTLVADEKGEAFFSGVKEVLRV---ADLIGRSIVVYGTEDKSDSG 431 V GVV+ Q + + A FSGL GKHG+ ++EFGD T G S G +NP K E E +GDLG +VA G A ++ +++ + +IGR++V++ ED G Sbjct: 13 VKGVVKFTQETDNGPVHVHAEFSGLKAGKHGFHVHEFGDTTNGCTSAGAHFNPTKQEHGAPEDSIRHVGDLGNVVAGADGNAVYNATDKLISLNGSHSIIGRTMVIHENEDDLGRG 128
BLAST of CN181747 vs. ExPASy Swiss-Prot
Match: SODCP_SOLLC (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solanum lycopersicum GN=SODCP.2 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.154e-11 Identity = 44/125 (35.20%), Postives = 66/125 (52.80%), Query Frame = -1 Query: 111 AVAEFKG-PDVFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNPK-----IEGSVKEPLGDLGTLVADEKGEAFFSGVKEVLRVA---DLIGRSIVVYGTEDKSDSG 458 AVA KG +V GVV L+Q + + +GL+PG HG+ ++E+GD T G +STG +NP G GDLG +VA+ G A + V + + ++GR++VV+ ED G Sbjct: 68 AVAVLKGNSNVEGVVTLSQDDDGPTTVNVRITGLAPGLHGFHLHEYGDTTNGCMSTGAHFNPNKLTHGAPGDEIRHAGDLGNIVANADGVAEVTLVDNQIPLTGPNSVVGRALVVHELEDDLGKG 192
BLAST of CN181747 vs. ExPASy Swiss-Prot
Match: SODC1_SOLLC (Superoxide dismutase [Cu-Zn] 1 OS=Solanum lycopersicum GN=SODCC.1 PE=2 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 6.154e-11 Identity = 44/139 (31.65%), Postives = 67/139 (48.20%), Query Frame = -1 Query: 78 LVSAAVAEFKGPDVFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNP--KIEGSVKEPL---GDLGTLVADEKGEAFFSGVKEVLRVA---DLIGRSIVVYGTEDKSDSGVTAAVIARSAG 470 +V A V G QV + + N SGL PG HG+ ++ GD T G +STG YNP K G+ ++ + GDLG + E G A F+ + + + +IGR++VV+ D D G +++S G Sbjct: 1 MVKAVAVLNSSEGVSGTYLFTQVGVAPTTVNGNISGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTITDKQIPLTGPQSIIGRAVVVHA--DPDDLGKGGHELSKSTG 137
BLAST of CN181747 vs. ExPASy Swiss-Prot
Match: CCS1_ASHGO (Superoxide dismutase 1 copper chaperone OS=Ashbya gossypii GN=CCS1 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.037e-11 Identity = 53/154 (34.42%), Postives = 74/154 (48.05%), Query Frame = -1 Query: 24 SAAVAEFK-----GPDVFGVVRLAQVNMELARIEANFSGL-SPGKHGWSINEFGDLTKGAVSTGRVYNPKIEGSVKEPLGDLGTLVADEKGEAFFSGVKEVLRVADLIGRSIVVYGTEDKSDSGVTAA-VIARSAGVGENYKKICACDGTIIWE 464 SAAVA + GP V G+VR QV + +GL P ++ SI GD+++GA STG ++ + E LG + G A F L V LIGR +V + +G A V+ARSAG +N K +CAC G +W+ Sbjct: 79 SAAVAILESASAGGPPVRGLVRAVQVAPNKTLFDITLNGLPGPAQYYASIRASGDVSRGAASTGPAWHVFEDAVACERASPLGADLC--AGSALFVAP---LAVQALIGRGFLVGADRGHALAGAAAVGVLARSAGAWQNDKVVCACSGDTLWQ 227 The following BLAST results are available for this feature:
BLAST of CN181747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181747 ID=CN181747; Name=CN181747; organism=Citrus sinensis; type=EST; length=473bpback to top |