CN181745
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181745 vs. ExPASy Swiss-Prot
Match: RL3_THEGJ (50S ribosomal protein L3P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl3p PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.925e-11 Identity = 31/95 (32.63%), Postives = 54/95 (56.84%), Query Frame = -3 Query: 254 GYHPRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSK 538 G+H RTE NK++ +G+ + + E DITP GGFPHYG++ D+L+I+G G KR++ +R ++ + +E ++ ++ SK Sbjct: 257 GFHHRTEFNKRLIAIGE------NGKLVLNGNEIDITPKGGFPHYGIIRSDFLMIEGSVPGSFKRIIRVRPAIKPPKKKPPVERPQITYVSRESK 345
BLAST of CN181745 vs. ExPASy Swiss-Prot
Match: RL3_PYRFU (50S ribosomal protein L3P OS=Pyrococcus furiosus GN=rpl3p PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.925e-11 Identity = 30/95 (31.58%), Postives = 56/95 (58.95%), Query Frame = -3 Query: 254 GYHPRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSK 538 G+H RTE+NK++ +G+ + + + TE +ITP GGFPHYG+V D+++I G G KR++ +R ++ + ++ ++ ++ SK Sbjct: 275 GFHHRTELNKRLIAIGE-----NGKLKLDENTEIEITPKGGFPHYGIVRSDFMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 364
BLAST of CN181745 vs. ExPASy Swiss-Prot
Match: RL3_METST (50S ribosomal protein L3P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl3p PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.925e-11 Identity = 40/98 (40.82%), Postives = 54/98 (55.10%), Query Frame = -3 Query: 248 GYHPRTEMNKKIYKLGKASQESHSAMTEFDRTEKD-ITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFG 538 GYH RTE NKK+ K+G D +E D I P GGF YG V +Y+L+KG GP KR+V LR+ + + ++ EI +I T+SK G Sbjct: 254 GYHKRTEYNKKLLKIG-------------DESEVDLINPDGGFVKYGFVKNNYILVKGSLPGPSKRLVVLRKGVRNASKQVTAPEI--SYISTTSKQG 336
BLAST of CN181745 vs. ExPASy Swiss-Prot
Match: RL3_METMP (50S ribosomal protein L3P OS=Methanococcus maripaludis GN=rpl3p PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.820e-11 Identity = 40/98 (40.82%), Postives = 51/98 (52.04%), Query Frame = -3 Query: 245 GYHPRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGH 538 G+H RTE NK+I KLG E ITP GGF +YG V Y+++KG GP KR+V LR S+ + L EI +I T SK G+ Sbjct: 253 GFHQRTEYNKRILKLGSEGAE--------------ITPKGGFLNYGAVKNGYVVVKGTVQGPAKRLVVLRGSVRAAEDKFGLPEI--AYISTESKQGN 334
BLAST of CN181745 vs. ExPASy Swiss-Prot
Match: RL3_METAC (50S ribosomal protein L3P OS=Methanosarcina acetivorans GN=rpl3p PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.820e-11 Identity = 38/97 (39.18%), Postives = 52/97 (53.61%), Query Frame = -3 Query: 248 GYHPRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFG 538 GYH RTE NK+I K+G +E +TP GGF +YG+V DY+LIKG GP KR++ LR + + + L E + +I SK G Sbjct: 257 GYHQRTEFNKRILKIGSDGEE--------------VTPEGGFINYGLVRGDYILIKGSVPGPSKRLIRLRDPI--RAKKADLGEPNILYISRESKQG 337
BLAST of CN181745 vs. ExPASy Swiss-Prot
Match: RL3_PYRAB (50S ribosomal protein L3P OS=Pyrococcus abyssi GN=rpl3p PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.989e-11 Identity = 30/95 (31.58%), Postives = 54/95 (56.84%), Query Frame = -3 Query: 254 GYHPRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSK 538 G+H RTE+NK++ +G+ + D E +ITP GGFPHYG+V D+++I G G KR++ +R ++ + ++ ++ ++ SK Sbjct: 272 GFHHRTELNKRLIAIGE------NGKLVIDGNEIEITPKGGFPHYGIVRSDFMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 360
BLAST of CN181745 vs. ExPASy Swiss-Prot
Match: RL3_METMA (50S ribosomal protein L3P OS=Methanosarcina mazei GN=rpl3p PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.989e-11 Identity = 38/97 (39.18%), Postives = 52/97 (53.61%), Query Frame = -3 Query: 248 GYHPRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFG 538 GYH RTE NK+I K+G +E +TP GGF +YG+V DY+LIKG GP KR++ LR + + + L E + +I SK G Sbjct: 257 GYHQRTEFNKRILKIGSDGEE--------------VTPEGGFINYGLVRGDYVLIKGSVPGPSKRLIRLRDPI--RAKKADLGEPNILYISRESKQG 337
BLAST of CN181745 vs. ExPASy Swiss-Prot
Match: RL3_METM7 (50S ribosomal protein L3P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl3p PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.989e-11 Identity = 39/98 (39.80%), Postives = 51/98 (52.04%), Query Frame = -3 Query: 245 GYHPRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGH 538 G+H RTE NK+I KLG E ITP GGF +YG V Y+++KG GP KR+V LR S+ + L E+ +I T SK G+ Sbjct: 253 GFHQRTEYNKRILKLGSEGAE--------------ITPKGGFLNYGAVKNGYVVVKGTVQGPAKRLVVLRGSVRAAEDKFGLPEV--AYISTESKQGN 334
BLAST of CN181745 vs. ExPASy Swiss-Prot
Match: RL3_METM6 (50S ribosomal protein L3P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl3p PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.989e-11 Identity = 39/98 (39.80%), Postives = 51/98 (52.04%), Query Frame = -3 Query: 245 GYHPRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGH 538 G+H RTE NK+I KLG E ITP GGF +YG V Y+++KG GP KR+V LR S+ + L E+ +I T SK G+ Sbjct: 253 GFHQRTEYNKRILKLGSEGAE--------------ITPKGGFLNYGAVKNGYVVVKGTVQGPAKRLVVLRGSVRAAEDKFGLPEV--AYISTESKQGN 334
BLAST of CN181745 vs. ExPASy Swiss-Prot
Match: RL3_METM5 (50S ribosomal protein L3P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl3p PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.989e-11 Identity = 39/98 (39.80%), Postives = 51/98 (52.04%), Query Frame = -3 Query: 245 GYHPRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGH 538 G+H RTE NK+I KLG E ITP GGF +YG V Y+++KG GP KR+V LR S+ + L E+ +I T SK G+ Sbjct: 253 GFHQRTEYNKRILKLGSEGAE--------------ITPKGGFLNYGAVKNGYVVVKGTVQGPAKRLVVLRGSVRAAEDKFGLPEV--AYISTESKQGN 334 The following BLAST results are available for this feature:
BLAST of CN181745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181745 ID=CN181745; Name=CN181745; organism=Citrus sinensis; type=EST; length=543bpback to top |