CN181745
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181745 vs. ExPASy Swiss-Prot
Match: RL3_METS3 (50S ribosomal protein L3P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl3p PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.516e-11 Identity = 39/97 (40.21%), Postives = 49/97 (50.52%), Query Frame = -3 Query: 248 GYHPRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFG 538 GYH RTE NKKI K+ A + I P GGF YG+V DY+L+KG GP KR+V LRQ + + +I +I T SK G Sbjct: 253 GYHKRTEFNKKILKIASADEVDQ------------INPDGGFVKYGLVKNDYVLVKGSLPGPSKRLVILRQPIRPNNKSEDMPQI--NYISTKSKQG 335
BLAST of CN181745 vs. ExPASy Swiss-Prot
Match: RL3_PYRHO (50S ribosomal protein L3P OS=Pyrococcus horikoshii GN=rpl3p PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 8.510e-11 Identity = 30/95 (31.58%), Postives = 54/95 (56.84%), Query Frame = -3 Query: 254 GYHPRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSK 538 G+H RTE+NK++ +G+ + D E +ITP GGFPHYG+V D+++I G G KR++ +R ++ + ++ ++ ++ SK Sbjct: 273 GFHHRTELNKRLIAIGE------NGKLVIDGNEIEITPKGGFPHYGIVRGDFMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 361
BLAST of CN181745 vs. ExPASy Swiss-Prot
Match: RL3_METTH (50S ribosomal protein L3P OS=Methanobacterium thermoautotrophicum GN=rpl3p PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 8.510e-11 Identity = 38/97 (39.18%), Postives = 55/97 (56.70%), Query Frame = -3 Query: 248 GYHPRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFG 538 GYH RTE NK+I K+G AS+ + P GGF YG+V DY++IKG GP KR+V LR+++ + + E ++ +I T+SK G Sbjct: 254 GYHRRTEYNKQILKIGDASEADL------------VNPDGGFVRYGLVRNDYVMIKGSVPGPTKRLVVLRKAI--RAAGKQEEAPQINYISTASKQG 336 The following BLAST results are available for this feature:
BLAST of CN181745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181745 ID=CN181745; Name=CN181745; organism=Citrus sinensis; type=EST; length=543bpback to top |