CN181741
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181741 vs. ExPASy Swiss-Prot
Match: TBB1_SOLTU (Tubulin beta-1 chain OS=Solanum tuberosum GN=TUBB1 PE=2 SV=1) HSP 1 Score: 440.654 bits (1132), Expect = 4.325e-123 Identity = 210/242 (86.78%), Postives = 222/242 (91.74%), Query Frame = 2 Query: 53 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQG---DTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCC 769 MREILHIQGGQCGNQIGSKFWEV+C EHG+DPTG+Y+G ++DLQLERINVY+NEAS GRYVPRAVLMDLEPGTMDS+RSGPYGQ+FRPDN VFGQSGAGNNWAKGHYTEGAELID+VLDVVRKEAENCDCLQGFQVCH ISK+REEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSFGDLNHLISATMSGVTCC Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGRYKGTAAESDLQLERINVYFNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNLVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKVREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCC 242
BLAST of CN181741 vs. ExPASy Swiss-Prot
Match: TBB_CICAR (Tubulin beta chain OS=Cicer arietinum GN=TUBB PE=2 SV=1) HSP 1 Score: 438.343 bits (1126), Expect = 2.146e-122 Identity = 211/241 (87.55%), Postives = 220/241 (91.29%), Query Frame = 2 Query: 53 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKY--QGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCC 769 MREILH+QGGQCGNQIGSKFWEV+C EHGID TGKY +G +D QLERINVYYNEAS GRYVPRAVLMDLEPGTM+S+RSGP+G++FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCC Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGIDQTGKYISEGGSDTQLERINVYYNEASGGRYVPRAVLMDLEPGTMESIRSGPFGKIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCC 241
BLAST of CN181741 vs. ExPASy Swiss-Prot
Match: TBB9_ARATH (Tubulin beta-9 chain OS=Arabidopsis thaliana GN=TUBB9 PE=2 SV=1) HSP 1 Score: 437.187 bits (1123), Expect = 4.782e-122 Identity = 208/239 (87.03%), Postives = 219/239 (91.63%), Query Frame = 2 Query: 53 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCC 769 MREILHIQGGQCGNQIG+KFWEV+C EHGID TG+ GDTDLQLERINVY+NEAS G+YVPRAVLMDLEPGTMDS+RSGP+GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+ P+FGDLNHLISATMSGVTCC Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCC 239
BLAST of CN181741 vs. ExPASy Swiss-Prot
Match: TBB2_DAUCA (Tubulin beta-2 chain OS=Daucus carota GN=TUBB2 PE=2 SV=1) HSP 1 Score: 435.261 bits (1118), Expect = 1.817e-121 Identity = 208/239 (87.03%), Postives = 218/239 (91.21%), Query Frame = 2 Query: 53 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCC 769 MREILHIQGGQCGNQIGSKFWEVVC EHGIDPTG+ ++DLQL+RINVYYNEAS GRYVPRAVLMDLEPGTMDSV++GP+GQ+FRPDNF+FGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC+CLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLS HQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLIS TMSGVTCC Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGQVLSESDLQLDRINVYYNEASGGRYVPRAVLMDLEPGTMDSVKTGPHGQIFRPDNFIFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCECLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSGHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISGTMSGVTCC 239
BLAST of CN181741 vs. ExPASy Swiss-Prot
Match: TBB3_PEA (Tubulin beta-3 chain (Fragment) OS=Pisum sativum GN=TUBB3 PE=2 SV=1) HSP 1 Score: 434.491 bits (1116), Expect = 3.099e-121 Identity = 205/230 (89.13%), Postives = 214/230 (93.04%), Query Frame = 2 Query: 80 GQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCC 769 GQCGNQIGSKFWEVVC EHGIDPTG+Y G++DLQLER+NVYYNEASCGR+VPRA+LMDLEPGTMDSVR+GPYGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSFGDLNHLISATMSGVTCC Sbjct: 1 GQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRFVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCC 230
BLAST of CN181741 vs. ExPASy Swiss-Prot
Match: TBB_CHLRE (Tubulin beta-1/beta-2 chain OS=Chlamydomonas reinhardtii GN=TUBB1 PE=3 SV=1) HSP 1 Score: 434.106 bits (1115), Expect = 4.048e-121 Identity = 206/239 (86.19%), Postives = 218/239 (91.21%), Query Frame = 2 Query: 53 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCC 769 MREI+HIQGGQCGNQIG+KFWEVV EHGIDPTG Y GD+DLQLERINVY+NEA+ GRYVPRA+LMDLEPGTMDSVRSGPYGQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAE+CDCLQGFQVCH ISKIREEYPDRMMLTFSV PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TP+FGDLNHLISA MSG+TCC Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVVSDEHGIDPTGTYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGITCC 239
BLAST of CN181741 vs. ExPASy Swiss-Prot
Match: TBB1_VOLCA (Tubulin beta chain OS=Volvox carteri GN=TUBB1 PE=3 SV=1) HSP 1 Score: 434.106 bits (1115), Expect = 4.048e-121 Identity = 206/239 (86.19%), Postives = 218/239 (91.21%), Query Frame = 2 Query: 53 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCC 769 MREI+HIQGGQCGNQIG+KFWEVV EHGIDPTG Y GD+DLQLERINVY+NEA+ GRYVPRA+LMDLEPGTMDSVRSGPYGQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAE+CDCLQGFQVCH ISKIREEYPDRMMLTFSV PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TP+FGDLNHLISA MSG+TCC Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVVSDEHGIDPTGTYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGITCC 239
BLAST of CN181741 vs. ExPASy Swiss-Prot
Match: TBB_CHLIN (Tubulin beta chain OS=Chlamydomonas incerta GN=TUBB PE=3 SV=1) HSP 1 Score: 433.721 bits (1114), Expect = 5.287e-121 Identity = 205/239 (85.77%), Postives = 218/239 (91.21%), Query Frame = 2 Query: 53 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCC 769 MREI+HIQGGQCGNQIG+KFWEVV EHG+DPTG Y GD+DLQLERINVY+NEA+ GRYVPRA+LMDLEPGTMDSVRSGPYGQ+FRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAE+CDCLQGFQVCH ISKIREEYPDRMMLTFSV PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TP+FGDLNHLISA MSG+TCC Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVVSDEHGVDPTGTYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGITCC 239
BLAST of CN181741 vs. ExPASy Swiss-Prot
Match: TBB8_ORYSJ (Tubulin beta-8 chain OS=Oryza sativa subsp. japonica GN=TUBB8 PE=2 SV=1) HSP 1 Score: 431.024 bits (1107), Expect = 3.427e-120 Identity = 206/239 (86.19%), Postives = 215/239 (89.96%), Query Frame = 2 Query: 53 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCC 769 MREILHIQGGQCGNQIG+KFWEV+C EHG+DPTG Y G + QLERINVY+NEAS GR+VPRAVLMDLEPGTMDS+RSGP G +FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+ PSFGDLNHLISATMSGVTCC Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLERINVYFNEASGGRHVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISATMSGVTCC 239
BLAST of CN181741 vs. ExPASy Swiss-Prot
Match: TBB1_ANEPH (Tubulin beta-1 chain OS=Anemia phyllitidis GN=TUBB1 PE=2 SV=1) HSP 1 Score: 430.639 bits (1106), Expect = 4.476e-120 Identity = 206/239 (86.19%), Postives = 215/239 (89.96%), Query Frame = 2 Query: 53 MREILHIQGGQCGNQIGSKFWEVVCAEHGIDPTGKYQGDTDLQLERINVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCC 769 MREILH+QGGQCGNQIG+KFWEVVC EHGIDPTG Y+GD++ QLER+NVYYNEASCGRYVPRAVLMDLEPGTMDSVRSG YGQ+FRPDNFVFGQSGAGNNWAKG YTEGAELIDSVL VVRKEAENCDCLQGFQVCH ISKIREEYPDRMM+TFSVF SPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDI RTLKL TP+FGDLNHLISATMSGVTCC Sbjct: 1 MREILHVQGGQCGNQIGAKFWEVVCTEHGIDPTGTYRGDSETQLERVNVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGHYGQIFRPDNFVFGQSGAGNNWAKGXYTEGAELIDSVLAVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFASPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDIXLRTLKLVTPTFGDLNHLISATMSGVTCC 239 The following BLAST results are available for this feature:
BLAST of CN181741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 423
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181741 ID=CN181741; Name=CN181741; organism=Citrus sinensis; type=EST; length=771bpback to top |