CN188703
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188703 vs. ExPASy Swiss-Prot
Match: RS16_MOUSE (40S ribosomal protein S16 OS=Mus musculus GN=Rps16 PE=2 SV=4) HSP 1 Score: 116.316 bits (290), Expect = 4.890e-26 Identity = 53/85 (62.35%), Postives = 70/85 (82.35%), Query Frame = 1 Query: 85 ESVQCFRRKNTAVAVTYCKRGRGLIKINGCPIELVDP*ILRFKAFEPILLLGRHRFNGVDMKIRGQGGGHTSQIYAIRQSISKSL 339 +SVQ F RK TA AV +CKRG GLIK+NG P+E+++P L++K EP+LLLG+ RF GVD+++R +GGGH +QIYAIRQSISK+L Sbjct: 8 QSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKAL 92
BLAST of CN188703 vs. ExPASy Swiss-Prot
Match: RS16_HUMAN (40S ribosomal protein S16 OS=Homo sapiens GN=RPS16 PE=1 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 4.890e-26 Identity = 53/85 (62.35%), Postives = 70/85 (82.35%), Query Frame = 1 Query: 85 ESVQCFRRKNTAVAVTYCKRGRGLIKINGCPIELVDP*ILRFKAFEPILLLGRHRFNGVDMKIRGQGGGHTSQIYAIRQSISKSL 339 +SVQ F RK TA AV +CKRG GLIK+NG P+E+++P L++K EP+LLLG+ RF GVD+++R +GGGH +QIYAIRQSISK+L Sbjct: 8 QSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKAL 92
BLAST of CN188703 vs. ExPASy Swiss-Prot
Match: RS16_BOVIN (40S ribosomal protein S16 OS=Bos taurus GN=RPS16 PE=2 SV=3) HSP 1 Score: 116.316 bits (290), Expect = 4.890e-26 Identity = 53/85 (62.35%), Postives = 70/85 (82.35%), Query Frame = 1 Query: 85 ESVQCFRRKNTAVAVTYCKRGRGLIKINGCPIELVDP*ILRFKAFEPILLLGRHRFNGVDMKIRGQGGGHTSQIYAIRQSISKSL 339 +SVQ F RK TA AV +CKRG GLIK+NG P+E+++P L++K EP+LLLG+ RF GVD+++R +GGGH +QIYAIRQSISK+L Sbjct: 8 QSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKAL 92
BLAST of CN188703 vs. ExPASy Swiss-Prot
Match: RS16_ICTPU (40S ribosomal protein S16 OS=Ictalurus punctatus GN=rps16 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.423e-25 Identity = 52/85 (61.18%), Postives = 69/85 (81.18%), Query Frame = 1 Query: 85 ESVQCFRRKNTAVAVTYCKRGRGLIKINGCPIELVDP*ILRFKAFEPILLLGRHRFNGVDMKIRGQGGGHTSQIYAIRQSISKSL 339 +SVQ F RK TA AV +CKRG GLIK+NG P+E ++P L++K EP+LLLG+ RF GVD+++R +GGGH +Q+YAIRQSISK+L Sbjct: 8 QSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLETIEPATLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQVYAIRQSISKAL 92
BLAST of CN188703 vs. ExPASy Swiss-Prot
Match: RS16_HETFO (40S ribosomal protein S16 OS=Heteropneustes fossilis GN=rps16 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.169e-25 Identity = 51/85 (60.00%), Postives = 69/85 (81.18%), Query Frame = 1 Query: 85 ESVQCFRRKNTAVAVTYCKRGRGLIKINGCPIELVDP*ILRFKAFEPILLLGRHRFNGVDMKIRGQGGGHTSQIYAIRQSISKSL 339 +SVQ F RK TA AV +CKRG GLIK+NG P+E ++P L++K EP+LLLG+ RF GVD+++R +GGGH +Q+YAIRQ+ISK+L Sbjct: 8 QSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLETIEPATLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQVYAIRQAISKAL 92
BLAST of CN188703 vs. ExPASy Swiss-Prot
Match: RS16_DROME (40S ribosomal protein S16 OS=Drosophila melanogaster GN=RpS16 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 9.221e-25 Identity = 50/85 (58.82%), Postives = 69/85 (81.18%), Query Frame = 1 Query: 85 ESVQCFRRKNTAVAVTYCKRGRGLIKINGCPIELVDP*ILRFKAFEPILLLGRHRFNGVDMKIRGQGGGHTSQIYAIRQSISKSL 339 ++VQ F RK TA AV YCKRG GL+K+NG P+E ++P +L++K EP+LLLG+ +F GVD+++R GGGH +QIYAIRQ+ISK+L Sbjct: 10 QAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLLGKEKFAGVDIRVRVSGGGHVAQIYAIRQAISKAL 94
BLAST of CN188703 vs. ExPASy Swiss-Prot
Match: RS16_SCHPO (40S ribosomal protein S16 OS=Schizosaccharomyces pombe GN=rps16a PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.204e-24 Identity = 51/85 (60.00%), Postives = 66/85 (77.65%), Query Frame = 1 Query: 85 ESVQCFRRKNTAVAVTYCKRGRGLIKINGCPIELVDP*ILRFKAFEPILLLGRHRFNGVDMKIRGQGGGHTSQIYAIRQSISKSL 339 +SVQCF +K A AV +CK G+GLIK+NG P+ LV P ILR K +EPIL+ G +F GVD+++R GGGH SQIYAIRQ+ISK++ Sbjct: 2 QSVQCFGKKGNATAVAHCKVGKGLIKVNGAPLSLVQPEILRMKVYEPILVAGADKFAGVDIRVRVSGGGHVSQIYAIRQAISKAI 86
BLAST of CN188703 vs. ExPASy Swiss-Prot
Match: RS16_SPOFR (40S ribosomal protein S16 OS=Spodoptera frugiperda GN=RpS16 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 2.683e-24 Identity = 48/85 (56.47%), Postives = 71/85 (83.53%), Query Frame = 1 Query: 85 ESVQCFRRKNTAVAVTYCKRGRGLIKINGCPIELVDP*ILRFKAFEPILLLGRHRFNGVDMKIRGQGGGHTSQIYAIRQSISKSL 339 ++VQ F RK TA AV YCKRG G++++NG P++LV+P +L++K EPILLLG+ +F+GVD+++ +GGGH +Q+YAIRQ+ISK+L Sbjct: 13 QAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIRQAISKAL 97
BLAST of CN188703 vs. ExPASy Swiss-Prot
Match: RS16_AEDAE (40S ribosomal protein S16 OS=Aedes aegypti GN=RpS16 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.504e-24 Identity = 49/84 (58.33%), Postives = 69/84 (82.14%), Query Frame = 1 Query: 88 SVQCFRRKNTAVAVTYCKRGRGLIKINGCPIELVDP*ILRFKAFEPILLLGRHRFNGVDMKIRGQGGGHTSQIYAIRQSISKSL 339 +VQ F RK TA AV YCKRG+GL+++NG P++ ++P +L++K EP+LLLG+ +F GVD++IR GGGH +QIYAIRQ+ISK+L Sbjct: 11 AVQVFGRKKTATAVAYCKRGKGLLRVNGRPLDQIEPKVLQYKLQEPLLLLGKEKFAGVDIRIRVSGGGHVAQIYAIRQAISKAL 94
BLAST of CN188703 vs. ExPASy Swiss-Prot
Match: RS16_CAEEL (40S ribosomal protein S16 OS=Caenorhabditis elegans GN=rps-16 PE=1 SV=3) HSP 1 Score: 108.227 bits (269), Expect = 1.332e-23 Identity = 49/85 (57.65%), Postives = 68/85 (80.00%), Query Frame = 1 Query: 85 ESVQCFRRKNTAVAVTYCKRGRGLIKINGCPIELVDP*ILRFKAFEPILLLGRHRFNGVDMKIRGQGGGHTSQIYAIRQSISKSL 339 +SVQ F RK TA AV +CK+G+GLIK+NG P+E ++P ILR K EP+LL+G+ RF VD++IR GGGH +QIYA+RQ+++K+L Sbjct: 6 QSVQTFGRKKTATAVAHCKKGQGLIKVNGRPLEFLEPQILRIKLQEPLLLVGKERFQDVDIRIRVSGGGHVAQIYAVRQALAKAL 90 The following BLAST results are available for this feature:
BLAST of CN188703 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188703 ID=CN188703; Name=CN188703; organism=Citrus sinensis; type=EST; length=352bpback to top |