CN188703
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188703 vs. ExPASy Swiss-Prot
Match: RS16_FRIAG (40S ribosomal protein S16 OS=Fritillaria agrestis GN=RPS16 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 4.412e-35 Identity = 73/90 (81.11%), Postives = 80/90 (88.89%), Query Frame = 1 Query: 70 AAPKTESVQCFRRKNTAVAVTYCKRGRGLIKINGCPIELVDP*ILRFKAFEPILLLGRHRFNGVDMKIRGQGGGHTSQIYAIRQSISKSL 339 A P TESVQCF RK TAVAVT+CKRGRGLIK+NG PIELV P ILR+KAFEPILLLGRHRF GVDM+IR +GGG TSQIYAIRQSI+K+L Sbjct: 2 ATPATESVQCFGRKKTAVAVTHCKRGRGLIKVNGSPIELVKPEILRYKAFEPILLLGRHRFVGVDMRIRVRGGGKTSQIYAIRQSIAKAL 91
BLAST of CN188703 vs. ExPASy Swiss-Prot
Match: RS16_GOSHI (40S ribosomal protein S16 OS=Gossypium hirsutum GN=RPS16 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 5.762e-35 Identity = 72/85 (84.71%), Postives = 78/85 (91.76%), Query Frame = 1 Query: 85 ESVQCFRRKNTAVAVTYCKRGRGLIKINGCPIELVDP*ILRFKAFEPILLLGRHRFNGVDMKIRGQGGGHTSQIYAIRQSISKSL 339 ESVQCF RK TAVAVT+CKRGRGLIKINGCPIELV+P ILRFKA EPILLLGR RF GVDM+IR +GGGHTSQIYAIRQSI+K+L Sbjct: 7 ESVQCFGRKKTAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAVEPILLLGRQRFTGVDMRIRVKGGGHTSQIYAIRQSIAKAL 91
BLAST of CN188703 vs. ExPASy Swiss-Prot
Match: RS161_ARATH (40S ribosomal protein S16-1 OS=Arabidopsis thaliana GN=RPS16A PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 2.860e-34 Identity = 69/88 (78.41%), Postives = 77/88 (87.50%), Query Frame = 1 Query: 76 PKTESVQCFRRKNTAVAVTYCKRGRGLIKINGCPIELVDP*ILRFKAFEPILLLGRHRFNGVDMKIRGQGGGHTSQIYAIRQSISKSL 339 P TESVQCF RK TAVAVT+CKRG GLIK+NGCPIEL P ILRFK FEPILLLG+HRF GV+M+IR GGGHTSQ+YAIRQSI+K+L Sbjct: 5 PATESVQCFGRKKTAVAVTHCKRGSGLIKLNGCPIELFQPEILRFKIFEPILLLGKHRFAGVNMRIRVNGGGHTSQVYAIRQSIAKAL 92
BLAST of CN188703 vs. ExPASy Swiss-Prot
Match: RS163_ARATH (40S ribosomal protein S16-3 OS=Arabidopsis thaliana GN=RPS16C PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 3.735e-34 Identity = 68/88 (77.27%), Postives = 77/88 (87.50%), Query Frame = 1 Query: 76 PKTESVQCFRRKNTAVAVTYCKRGRGLIKINGCPIELVDP*ILRFKAFEPILLLGRHRFNGVDMKIRGQGGGHTSQIYAIRQSISKSL 339 P TESVQCF RK TAVAVT+CKRG GLIK+NGCPIEL P ILRFK FEP+LLLG+HRF GV+M+IR GGGHTSQ+YAIRQSI+K+L Sbjct: 5 PATESVQCFGRKKTAVAVTHCKRGSGLIKLNGCPIELFQPEILRFKIFEPVLLLGKHRFAGVNMRIRVNGGGHTSQVYAIRQSIAKAL 92
BLAST of CN188703 vs. ExPASy Swiss-Prot
Match: RS162_ARATH (40S ribosomal protein S16-2 OS=Arabidopsis thaliana GN=RPS16B PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.017e-31 Identity = 64/88 (72.73%), Postives = 74/88 (84.09%), Query Frame = 1 Query: 76 PKTESVQCFRRKNTAVAVTYCKRGRGLIKINGCPIELVDP*ILRFKAFEPILLLGRHRFNGVDMKIRGQGGGHTSQIYAIRQSISKSL 339 P ESVQCF RK TA AVTYCKRG G+IK+NG PIEL P ILRFK FEP+LLLG+HRF GVDM+IR GGG+TS++YAIRQSI+K+L Sbjct: 5 PAKESVQCFGRKKTATAVTYCKRGSGMIKLNGSPIELYQPEILRFKIFEPVLLLGKHRFAGVDMRIRATGGGNTSRVYAIRQSIAKAL 92
BLAST of CN188703 vs. ExPASy Swiss-Prot
Match: RS16_TORRU (40S ribosomal protein S16 OS=Tortula ruralis GN=RPS16 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.624e-29 Identity = 64/85 (75.29%), Postives = 76/85 (89.41%), Query Frame = 1 Query: 85 ESVQCFRRKNTAVAVTYCKRGRGLIKINGCPIELVDP*ILRFKAFEPILLLGRHRFNGVDMKIRGQGGGHTSQIYAIRQSISKSL 339 ESVQCF RK TAVAVTYC+RGRGLI++ PIELV+P ILR+KAFEP+LLLGR +F GVDM+IR +GGG+TSQIYAIRQSI+K+L Sbjct: 5 ESVQCFGRKKTAVAVTYCRRGRGLIRLT-VPIELVEPEILRYKAFEPVLLLGRSKFAGVDMRIRVKGGGNTSQIYAIRQSIAKAL 88
BLAST of CN188703 vs. ExPASy Swiss-Prot
Match: RS16_ORYSJ (40S ribosomal protein S16 OS=Oryza sativa subsp. japonica GN=RPS16A PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 8.059e-29 Identity = 62/92 (67.39%), Postives = 73/92 (79.35%), Query Frame = 1 Query: 64 ATAAPKTESVQCFRRKNTAVAVTYCKRGRGLIKINGCPIELVDP*ILRFKAFEPILLLGRHRFNGVDMKIRGQGGGHTSQIYAIRQSISKSL 339 A P +VQCF RK TAVAV+YCK GRGLIK+NG PIEL+ P +LR KAFEPILL GR RF +DM+IR +GGG TSQIYAIRQ+I+K+L Sbjct: 4 ALTRPPPGTVQCFGRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRFKDIDMRIRVRGGGKTSQIYAIRQAIAKAL 95
BLAST of CN188703 vs. ExPASy Swiss-Prot
Match: RS16_ORYSI (40S ribosomal protein S16 OS=Oryza sativa subsp. indica GN=RPS16A PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 8.059e-29 Identity = 62/92 (67.39%), Postives = 73/92 (79.35%), Query Frame = 1 Query: 64 ATAAPKTESVQCFRRKNTAVAVTYCKRGRGLIKINGCPIELVDP*ILRFKAFEPILLLGRHRFNGVDMKIRGQGGGHTSQIYAIRQSISKSL 339 A P +VQCF RK TAVAV+YCK GRGLIK+NG PIEL+ P +LR KAFEPILL GR RF +DM+IR +GGG TSQIYAIRQ+I+K+L Sbjct: 4 ALTRPPPGTVQCFGRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRFKDIDMRIRVRGGGKTSQIYAIRQAIAKAL 95
BLAST of CN188703 vs. ExPASy Swiss-Prot
Match: RS16_RAT (40S ribosomal protein S16 OS=Rattus norvegicus GN=Rps16 PE=1 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 4.890e-26 Identity = 53/85 (62.35%), Postives = 70/85 (82.35%), Query Frame = 1 Query: 85 ESVQCFRRKNTAVAVTYCKRGRGLIKINGCPIELVDP*ILRFKAFEPILLLGRHRFNGVDMKIRGQGGGHTSQIYAIRQSISKSL 339 +SVQ F RK TA AV +CKRG GLIK+NG P+E+++P L++K EP+LLLG+ RF GVD+++R +GGGH +QIYAIRQSISK+L Sbjct: 8 QSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKAL 92
BLAST of CN188703 vs. ExPASy Swiss-Prot
Match: RS16_PIG (40S ribosomal protein S16 OS=Sus scrofa GN=RPS16 PE=2 SV=4) HSP 1 Score: 116.316 bits (290), Expect = 4.890e-26 Identity = 53/85 (62.35%), Postives = 70/85 (82.35%), Query Frame = 1 Query: 85 ESVQCFRRKNTAVAVTYCKRGRGLIKINGCPIELVDP*ILRFKAFEPILLLGRHRFNGVDMKIRGQGGGHTSQIYAIRQSISKSL 339 +SVQ F RK TA AV +CKRG GLIK+NG P+E+++P L++K EP+LLLG+ RF GVD+++R +GGGH +QIYAIRQSISK+L Sbjct: 8 QSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKAL 92 The following BLAST results are available for this feature:
BLAST of CN188703 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188703 ID=CN188703; Name=CN188703; organism=Citrus sinensis; type=EST; length=352bpback to top |