CN188702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188702 vs. ExPASy Swiss-Prot
Match: RS16_PIG (40S ribosomal protein S16 OS=Sus scrofa GN=RPS16 PE=2 SV=4) HSP 1 Score: 176.022 bits (445), Expect = 7.890e-44 Identity = 83/117 (70.94%), Postives = 101/117 (86.32%), Query Frame = -2 Query: 130 GLIKINGCPIELVEPEILRFKAFEPILLFGRHCFNGVDMRIRVKGGGHTSQMYAIRQSIAKALVAFYQKYVDEPSKKEIKDILVRYDRTLIVADHRRCEPKKFRGRGARARFQKSCR 480 GLIK+NG P+E++EP L++K EP+LL G+ F GVD+R+RVKGGGH +Q+YAIRQSI+KALVA+YQKYVDE SKKEIKDIL++YDRTL+VAD RRCE KKF G GARAR+QKS R Sbjct: 30 GLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
BLAST of CN188702 vs. ExPASy Swiss-Prot
Match: RS16_MOUSE (40S ribosomal protein S16 OS=Mus musculus GN=Rps16 PE=2 SV=4) HSP 1 Score: 176.022 bits (445), Expect = 7.890e-44 Identity = 83/117 (70.94%), Postives = 101/117 (86.32%), Query Frame = -2 Query: 130 GLIKINGCPIELVEPEILRFKAFEPILLFGRHCFNGVDMRIRVKGGGHTSQMYAIRQSIAKALVAFYQKYVDEPSKKEIKDILVRYDRTLIVADHRRCEPKKFRGRGARARFQKSCR 480 GLIK+NG P+E++EP L++K EP+LL G+ F GVD+R+RVKGGGH +Q+YAIRQSI+KALVA+YQKYVDE SKKEIKDIL++YDRTL+VAD RRCE KKF G GARAR+QKS R Sbjct: 30 GLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
BLAST of CN188702 vs. ExPASy Swiss-Prot
Match: RS16_HUMAN (40S ribosomal protein S16 OS=Homo sapiens GN=RPS16 PE=1 SV=2) HSP 1 Score: 176.022 bits (445), Expect = 7.890e-44 Identity = 83/117 (70.94%), Postives = 101/117 (86.32%), Query Frame = -2 Query: 130 GLIKINGCPIELVEPEILRFKAFEPILLFGRHCFNGVDMRIRVKGGGHTSQMYAIRQSIAKALVAFYQKYVDEPSKKEIKDILVRYDRTLIVADHRRCEPKKFRGRGARARFQKSCR 480 GLIK+NG P+E++EP L++K EP+LL G+ F GVD+R+RVKGGGH +Q+YAIRQSI+KALVA+YQKYVDE SKKEIKDIL++YDRTL+VAD RRCE KKF G GARAR+QKS R Sbjct: 30 GLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
BLAST of CN188702 vs. ExPASy Swiss-Prot
Match: RS16_BOVIN (40S ribosomal protein S16 OS=Bos taurus GN=RPS16 PE=2 SV=3) HSP 1 Score: 176.022 bits (445), Expect = 7.890e-44 Identity = 83/117 (70.94%), Postives = 101/117 (86.32%), Query Frame = -2 Query: 130 GLIKINGCPIELVEPEILRFKAFEPILLFGRHCFNGVDMRIRVKGGGHTSQMYAIRQSIAKALVAFYQKYVDEPSKKEIKDILVRYDRTLIVADHRRCEPKKFRGRGARARFQKSCR 480 GLIK+NG P+E++EP L++K EP+LL G+ F GVD+R+RVKGGGH +Q+YAIRQSI+KALVA+YQKYVDE SKKEIKDIL++YDRTL+VAD RRCE KKF G GARAR+QKS R Sbjct: 30 GLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
BLAST of CN188702 vs. ExPASy Swiss-Prot
Match: RS16_ICTPU (40S ribosomal protein S16 OS=Ictalurus punctatus GN=rps16 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 2.296e-43 Identity = 83/117 (70.94%), Postives = 100/117 (85.47%), Query Frame = -2 Query: 130 GLIKINGCPIELVEPEILRFKAFEPILLFGRHCFNGVDMRIRVKGGGHTSQMYAIRQSIAKALVAFYQKYVDEPSKKEIKDILVRYDRTLIVADHRRCEPKKFRGRGARARFQKSCR 480 GLIK+NG P+E +EP L++K EP+LL G+ F GVD+R+RVKGGGH +Q+YAIRQSI+KALVA+YQKYVDE SKKEIKDIL++YDRTL+VAD RRCE KKF G GARAR+QKS R Sbjct: 30 GLIKVNGRPLETIEPATLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQVYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
BLAST of CN188702 vs. ExPASy Swiss-Prot
Match: RS16_DROME (40S ribosomal protein S16 OS=Drosophila melanogaster GN=RpS16 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 2.998e-43 Identity = 82/117 (70.09%), Postives = 101/117 (86.32%), Query Frame = -2 Query: 130 GLIKINGCPIELVEPEILRFKAFEPILLFGRHCFNGVDMRIRVKGGGHTSQMYAIRQSIAKALVAFYQKYVDEPSKKEIKDILVRYDRTLIVADHRRCEPKKFRGRGARARFQKSCR 480 GL+K+NG P+E +EP++L++K EP+LL G+ F GVD+R+RV GGGH +Q+YAIRQ+I+KALVAFYQKYVDE SKKEIKDILV+YDRTL+V D RRCEPKKF G GARAR+QKS R Sbjct: 32 GLLKVNGRPLEQIEPKVLQYKLQEPLLLLGKEKFAGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEIKDILVQYDRTLLVGDPRRCEPKKFGGPGARARYQKSYR 148
BLAST of CN188702 vs. ExPASy Swiss-Prot
Match: RS16_SPOFR (40S ribosomal protein S16 OS=Spodoptera frugiperda GN=RpS16 PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 3.916e-43 Identity = 81/117 (69.23%), Postives = 103/117 (88.03%), Query Frame = -2 Query: 130 GLIKINGCPIELVEPEILRFKAFEPILLFGRHCFNGVDMRIRVKGGGHTSQMYAIRQSIAKALVAFYQKYVDEPSKKEIKDILVRYDRTLIVADHRRCEPKKFRGRGARARFQKSCR 480 G++++NG P++LVEP +L++K EPILL G+ F+GVD+R+ VKGGGH +Q+YAIRQ+I+KAL+AFYQKYVDE SKKEIKDILV+YDR+L+VAD RRCEPKKF G GARAR+QKS R Sbjct: 35 GVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 151
BLAST of CN188702 vs. ExPASy Swiss-Prot
Match: RS16_HETFO (40S ribosomal protein S16 OS=Heteropneustes fossilis GN=rps16 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 5.114e-43 Identity = 82/117 (70.09%), Postives = 100/117 (85.47%), Query Frame = -2 Query: 130 GLIKINGCPIELVEPEILRFKAFEPILLFGRHCFNGVDMRIRVKGGGHTSQMYAIRQSIAKALVAFYQKYVDEPSKKEIKDILVRYDRTLIVADHRRCEPKKFRGRGARARFQKSCR 480 GLIK+NG P+E +EP L++K EP+LL G+ F GVD+R+RVKGGGH +Q+YAIRQ+I+KALVA+YQKYVDE SKKEIKDIL++YDRTL+VAD RRCE KKF G GARAR+QKS R Sbjct: 30 GLIKVNGRPLETIEPATLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQVYAIRQAISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
BLAST of CN188702 vs. ExPASy Swiss-Prot
Match: RS16_AEDAE (40S ribosomal protein S16 OS=Aedes aegypti GN=RpS16 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 5.654e-42 Identity = 78/118 (66.10%), Postives = 102/118 (86.44%), Query Frame = -2 Query: 130 RGLIKINGCPIELVEPEILRFKAFEPILLFGRHCFNGVDMRIRVKGGGHTSQMYAIRQSIAKALVAFYQKYVDEPSKKEIKDILVRYDRTLIVADHRRCEPKKFRGRGARARFQKSCR 483 +GL+++NG P++ +EP++L++K EP+LL G+ F GVD+RIRV GGGH +Q+YAIRQ+I+KALV+FYQKYVDE S+KE+KDIL +YDRTL+VAD RRCEPKKF G GARAR+QKS R Sbjct: 31 KGLLRVNGRPLDQIEPKVLQYKLQEPLLLLGKEKFAGVDIRIRVSGGGHVAQIYAIRQAISKALVSFYQKYVDEASRKELKDILTQYDRTLLVADPRRCEPKKFGGPGARARYQKSYR 148
BLAST of CN188702 vs. ExPASy Swiss-Prot
Match: RS16_CANAL (40S ribosomal protein S16 OS=Candida albicans GN=RPS16 PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 2.149e-41 Identity = 81/118 (68.64%), Postives = 96/118 (81.36%), Query Frame = -2 Query: 130 RGLIKINGCPIELVEPEILRFKAFEPILLFGRHCFNGVDMRIRVKGGGHTSQMYAIRQSIAKALVAFYQKYVDEPSKKEIKDILVRYDRTLIVADHRRCEPKKFRGRGARARFQKSCR 483 +GLIKING PI LV+PEILRFK +EP+ L G F G+D+R++V GGGH SQ+YAIRQ+IAK LVA++QKYVDE SK E+K I YD+TL+VAD RR EPKKF GRGARARFQKS R Sbjct: 25 KGLIKINGSPITLVQPEILRFKVYEPLTLVGLDKFQGIDIRVKVTGGGHVSQVYAIRQAIAKGLVAYHQKYVDEASKNELKKIFASYDKTLLVADSRRMEPKKFGGRGARARFQKSYR 142 The following BLAST results are available for this feature:
BLAST of CN188702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188702 ID=CN188702; Name=CN188702; organism=Citrus sinensis; type=EST; length=490bpback to top |