CN188702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188702 vs. ExPASy Swiss-Prot
Match: RS9_THEAC (30S ribosomal protein S9P OS=Thermoplasma acidophilum GN=rps9p PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.124e-16 Identity = 51/118 (43.22%), Postives = 75/118 (63.56%), Query Frame = -2 Query: 130 RGLIKINGCPIELVEPEILRFKAFEPILLFGRHCFNGVDMRIRVKGGGHTSQMYAIRQSIAKALVAFYQKYVDEPSKKEIKDILVRYDRTLIVADHRRCEPKKFRGRGARARFQKSCR 483 +G++ ING P+EL +LR K EP+L+ +D+ ++V+GGG T Q A R +IA+A+V KY+++ E++++ +YDRTLIV D R PKK GRGARA+ QKS R Sbjct: 20 KGIVTINGYPVELYPVRVLRNKIMEPLLI-AEDKAKDLDIAVKVRGGGVTGQADASRTAIARAIV----KYLNDT---ELENLFRQYDRTLIVNDVRIKLPKKAGGRGARAKKQKSYR 129
BLAST of CN188702 vs. ExPASy Swiss-Prot
Match: RS9_THESM (30S ribosomal protein S9P OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rps9p PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 6.960e-16 Identity = 46/119 (38.66%), Postives = 70/119 (58.82%), Query Frame = -2 Query: 130 GLIKINGCPIELVEPEILRFKAFEPILLFGRHCFNGVDMRIRVKGGGHTSQMYAIRQSIAKALVAFYQKYVDEPSKKEIKDILVRYDRTLIVADHRRCEPKK--FRGRGARARFQKSCR 480 G +++N P+E++EPEI RF EP+++ G VD+ ++V+GGG Q A R +IA+ALV + +K+ ++YDRT++V D RR EP K +G RA+ QKS R Sbjct: 32 GRVRVNYKPVEILEPEIARFTIMEPLVIAGEEILGKVDVDVKVEGGGFMGQAEAARIAIARALVEW-------TGDMNLKEKFMKYDRTMLVGDSRRTEPHKPNRSTKGPRAKRQKSYR 143
BLAST of CN188702 vs. ExPASy Swiss-Prot
Match: RS9_DESK1 (30S ribosomal protein S9P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rps9p PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 6.960e-16 Identity = 46/117 (39.32%), Postives = 68/117 (58.12%), Query Frame = -2 Query: 130 GLIKINGCPIELVEPEILRFKAFEPILLFGRHCFNGVDMRIRVKGGGHTSQMYAIRQSIAKALVAFYQKYVDEPSKKEIKDILVRYDRTLIVADHRRCEPKKFRGRGARARFQKSCR 480 G + IN P+E ++ E+ + K EP+LL G VD+R+ V GGG+ SQ A+R +IA+ LV F+ + E+K + YDR ++ D R+ EPKK+ AR R+QKS R Sbjct: 32 GRVWINNVPVEFIQFELAKMKILEPLLLIG-DLAKTVDIRVNVHGGGYMSQAEAVRIAIARGLVEFF-------NSDEVKSLFKEYDRHMLSGDPRQTEPKKWGRYSARRRWQKSYR 140
BLAST of CN188702 vs. ExPASy Swiss-Prot
Match: RS9_ARCFU (30S ribosomal protein S9P OS=Archaeoglobus fulgidus GN=rps9p PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.645e-15 Identity = 46/118 (38.98%), Postives = 69/118 (58.47%), Query Frame = -2 Query: 130 RGLIKINGCPIELVEPEILRFKAFEPILLFGRHCFNGVDMRIRVKGGGHTSQMYAIRQSIAKALVAFYQKYVDEPSKKEIKDILVRYDRTLIVADHRRCEPKKFRGRGARARFQKSCR 483 +G ++IN P+E+ +PE+ R K EP+++ + VD+ ++ GGG +Q A R +IA+AL+ F +E++ + YDRTL+V D RR PK GRGARAR Q S R Sbjct: 26 KGRVRINSVPVEIHQPELARMKIMEPLII-AKELAEKVDIEVKTWGGGFMAQAEAARTAIARALLEF-------SGDEELRKAFLEYDRTLLVNDVRRKLPKIQGGRGARARRQTSYR 135
BLAST of CN188702 vs. ExPASy Swiss-Prot
Match: RS9_PICTO (30S ribosomal protein S9P OS=Picrophilus torridus GN=rps9p PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.695e-15 Identity = 51/117 (43.59%), Postives = 69/117 (58.97%), Query Frame = -2 Query: 130 GLIKINGCPIELVEPEILRFKAFEPILLFGRHCFNGVDMRIRVKGGGHTSQMYAIRQSIAKALVAFYQKYVDEPSKKEIKDILVRYDRTLIVADHRRCEPKKFRGRGARARFQKSCR 480 G ING PIEL EILR K EPI + G +D+ + V GGG+T Q A R ++AKA++ +++ D + EI+ YDR+++V D RR PKK G GARA+ QKS R Sbjct: 25 GKFLINGYPIELYPIEILREKMLEPIRILGDRS-KEIDIDVNVHGGGNTGQADATRTAMAKAIIEYFK---DSDLEAEIR----AYDRSMLVNDVRRKMPKKPMGYGARAKRQKSYR 133
BLAST of CN188702 vs. ExPASy Swiss-Prot
Match: RS9_SULTO (30S ribosomal protein S9P OS=Sulfolobus tokodaii GN=rps9p PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 4.988e-14 Identity = 42/118 (35.59%), Postives = 67/118 (56.78%), Query Frame = -2 Query: 130 RGLIKINGCPIELVEPEILRFKAFEPILLFGRHCFNGVDMRIRVKGGGHTSQMYAIRQSIAKALVAFYQKYVDEPSKKEIKDILVRYDRTLIVADHRRCEPKKFRGRGARARFQKSCR 483 +G + +N P+E++ E++R K EP+LL G + +D +I V+GGG Q A R ++A+ALV F KE+++I YDRT++ D R+ E +K+ AR QK+ R Sbjct: 27 KGRVFVNDIPLEIIPMEVVRMKIMEPLLLAGEKISSSIDAKIYVEGGGVMGQADAARMALARALVKF-------TGSKELEEIYKVYDRTMLAGDPRQTESEKWMRYSARRWRQKAYR 137
BLAST of CN188702 vs. ExPASy Swiss-Prot
Match: RS9_PYRAE (30S ribosomal protein S9P OS=Pyrobaculum aerophilum GN=rps9p PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 1.111e-13 Identity = 45/117 (38.46%), Postives = 69/117 (58.97%), Query Frame = -2 Query: 130 GLIKINGCPIELVEPEILRFKAFEPILLFGRHCFNGVDMRIRVKGGGHTSQMYAIRQSIAKALVAFYQKYVDEPSKKEIKDILVRYDRTLIVADHRRCEPKKFRGRGARARFQKSCR 480 G ++ING P+EL E+ R K EP++L G VD+ + V GGG+ Q A+R ++A+ LVAF+Q +E+K++ RYD ++ D RR E KK + AR++ QK+ R Sbjct: 34 GRVRINGYPLELWPIEMARIKMSEPLILAGELA-KKVDIDVNVSGGGYMGQAVAVRIAMARGLVAFFQ-------SQELKELYERYDPYMLKGDPRRTEHKKPGIKHARSKRQKAYR 142
BLAST of CN188702 vs. ExPASy Swiss-Prot
Match: RS9_SULSO (30S ribosomal protein S9P OS=Sulfolobus solfataricus GN=rps9p PE=3 SV=3) HSP 1 Score: 73.9442 bits (180), Expect = 4.223e-13 Identity = 44/118 (37.29%), Postives = 64/118 (54.24%), Query Frame = -2 Query: 130 RGLIKINGCPIELVEPEILRFKAFEPILLFGRHCFNGVDMRIRVKGGGHTSQMYAIRQSIAKALVAFYQKYVDEPSKKEIKDILVRYDRTLIVADHRRCEPKKFRGRGARARFQKSCR 483 +G + +N PIEL+ E++R K EP+LL G + +D +I GGG Q A R ++A+ALV F KE++ I YDRT++ D R+ E +K+ AR QKS R Sbjct: 27 KGRVFVNNVPIELIPIEMVRLKIMEPLLLAGNDIRSKIDAKIITYGGGIMGQADAARMALARALVKF-------TGSKELEKIYRAYDRTMLAGDPRQTESEKWMRYSARRWRQKSYR 137
BLAST of CN188702 vs. ExPASy Swiss-Prot
Match: RS9_SULAC (30S ribosomal protein S9P OS=Sulfolobus acidocaldarius GN=rps9p PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 4.223e-13 Identity = 41/117 (35.04%), Postives = 66/117 (56.41%), Query Frame = -2 Query: 130 GLIKINGCPIELVEPEILRFKAFEPILLFGRHCFNGVDMRIRVKGGGHTSQMYAIRQSIAKALVAFYQKYVDEPSKKEIKDILVRYDRTLIVADHRRCEPKKFRGRGARARFQKSCR 480 G + +N PIE++ E++R+K EP++L G + ++ RI +GGG Q A R ++A+ALV F + KE+ +I YDRT++ D R+ E +K+ AR QK+ R Sbjct: 29 GKVFVNDIPIEIIPIEVVRYKIMEPLVLAGDKITSSIEARIYTQGGGIMGQADAARMALARALVKF-------TNSKELVEIYKSYDRTMLAGDPRQTESEKWMRYSARRWRQKAYR 138 The following BLAST results are available for this feature:
BLAST of CN188702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188702 ID=CN188702; Name=CN188702; organism=Citrus sinensis; type=EST; length=490bpback to top |