CN188701
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188701 vs. ExPASy Swiss-Prot
Match: HSP15_SOYBN (17.6 kDa class I heat shock protein OS=Glycine max GN=HSP17.6-L PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 6.189e-40 Identity = 88/154 (57.14%), Postives = 101/154 (65.58%), Query Frame = 2 Query: 47 MSLIPSIFGN--RSVFDPFSSDVW-------APLGSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 481 MSLIPSIFG +VFDPFS D+W P S S E S F + +VDWKET+EAHV KAD+PGL D RVLQISGER+VEKEDKND WHRV+R GKF+RRFRLPENAK++QVKA MENGVL I+I+G Sbjct: 1 MSLIPSIFGGPRSNVFDPFSLDMWDPFKDFHVPTSSVSAENSAFVNTRVDWKETQEAHVLKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVDRSSGKFMRRFRLPENAKVEQVKACMENGVLTVTIPKEEVKKSDVKPIEISG 154
BLAST of CN188701 vs. ExPASy Swiss-Prot
Match: HS17C_ARATH (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 SV=2) HSP 1 Score: 162.155 bits (409), Expect = 2.352e-39 Identity = 87/157 (55.41%), Postives = 103/157 (65.61%), Query Frame = 2 Query: 47 MSLIPSIFGNR--SVFDPFSSDVWAPL----------GSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 481 MSLIPSIFG R +VFDPFS DV+ P + + +V+ F +A+VDW+ET EAHVFKADLPGL DG +LQISGERS E E+KNDKWHRVER GKF RRFRLPENAK++++KASMENGVL SI I+G Sbjct: 1 MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157
BLAST of CN188701 vs. ExPASy Swiss-Prot
Match: HSP17_ARATH (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=2) HSP 1 Score: 161.384 bits (407), Expect = 4.011e-39 Identity = 83/156 (53.21%), Postives = 102/156 (65.38%), Query Frame = 2 Query: 47 MSLIPSIFGNR--SVFDPFSSDVWAPL---------GSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 481 MSL+PS FG R +VFDPFS DVW P + + +V+ F +A+VDW+ET EAHVFKAD+PGL DG +LQISGERS E E+K+D WHRVER GKF+RRFRLPENAK+++VKASMENGVL S+ I+G Sbjct: 1 MSLVPSFFGGRRTNVFDPFSLDVWDPFEGFLTPGLTNAPAKDVAAFTNAKVDWRETPEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156
BLAST of CN188701 vs. ExPASy Swiss-Prot
Match: HS17B_ARATH (17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana GN=HSP17.6B PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.167e-38 Identity = 86/153 (56.21%), Postives = 98/153 (64.05%), Query Frame = 2 Query: 47 MSLIPSIFGNR---SVFDPFSSDVWAPL-----GSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 481 MS+IPS F N ++FDPFS DVW P S S E S +A+VDW+ET EAHVFKADLPGL + VL+ISGER VEKEDKND WHRVER G+F RRFRLPEN K+DQVKA+MENGVL SIQI+G Sbjct: 1 MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELTSSSLSRENSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153
BLAST of CN188701 vs. ExPASy Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.991e-38 Identity = 85/157 (54.14%), Postives = 103/157 (65.61%), Query Frame = 2 Query: 47 MSLIPSIFGNR--SVFDPFSSDVWAP-----LGSSS-----NEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 481 MS+IPS FG R +VFDPFS DVW P L +SS E + F + +DWKET +AHVFKADLPGL +G+VLQISGER+ EKE+KNDKWHRVER GKF+RRFRLPENAK+D+VKA+M NGV+ +I I+G Sbjct: 1 MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVTSSASEFGKETAAFVNTHIDWKETPQAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPENAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDISG 157
BLAST of CN188701 vs. ExPASy Swiss-Prot
Match: HS178_ARATH (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 5.792e-38 Identity = 82/134 (61.19%), Postives = 92/134 (68.66%), Query Frame = 2 Query: 47 MSLIPSIFGNR----SVFDPFSSDVWAPL------GSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 418 MSLIPS FGN S+FDPFS DVW P S S E S +A+VDWKET EAHVFKADLPG+ D VL+ISGER VEKE+K D WHRVER G+F R+F+LPEN K+DQVKASMENGVL Sbjct: 1 MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSGETSAITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENGVL 134
BLAST of CN188701 vs. ExPASy Swiss-Prot
Match: HS16B_ORYSJ (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP16.9B PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.201e-37 Identity = 79/149 (53.02%), Postives = 97/149 (65.10%), Query Frame = 2 Query: 62 SIFGNRSVFDPFSSDVWAPLGS---------SSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 481 S+ +VFDPFS D+W P S S N+ + FA+A++DWKET E+HVFKADLPG+ +G VL ISG+RS EKEDKNDKWHRVER G+F+RRFRLPENAK+DQVKA MENGVL +I+I+G Sbjct: 2 SLVRRSNVFDPFSLDLWDPFDSVFRSVVPATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGMENGVLTVTVPKAEVKKPEVKAIEISG 150
BLAST of CN188701 vs. ExPASy Swiss-Prot
Match: HS17A_ARATH (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.875e-37 Identity = 82/132 (62.12%), Postives = 92/132 (69.70%), Query Frame = 2 Query: 47 MSLIPSIFGNR-----SVFDPFSSDVWAP---LGSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 418 MSLIPS FGN ++FDPFS DVW P L S+ S A+A+VDWKET EAHVFKADLPG+ D VL+ISGER VEKE+K D WHRVER G F R+FRLPEN K+DQVKASMENGVL Sbjct: 1 MSLIPSFFGNNRRINNNIFDPFSLDVWDPFKELQFPSSSSSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFSRKFRLPENVKMDQVKASMENGVL 132
BLAST of CN188701 vs. ExPASy Swiss-Prot
Match: HSP12_DAUCA (18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.755e-37 Identity = 83/159 (52.20%), Postives = 102/159 (64.15%), Query Frame = 2 Query: 47 MSLIPSIFGNR--SVFDPFSSDVWAPL---------GSSSN---EVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 481 MS+IPS FG+R +V +PFS D+W P G+SS E + FA+ +DWKET +AHVFKADLPGL +G+VLQISGER+ EKE+KN+KWHRVE GKF+RRFRLPENA +D+VKA MENGVL SI I+G Sbjct: 1 MSIIPSFFGSRRSNVLNPFSLDIWDPFQDYPLITSSGTSSEFGKETAAFANTHIDWKETPQAHVFKADLPGLKKEEVKVEVEEGKVLQISGERNKEKEEKNNKWHRVEFSSGKFLRRFRLPENANVDEVKAGMENGVLTVTVPKVEMKKPEVKSIHISG 159
BLAST of CN188701 vs. ExPASy Swiss-Prot
Match: HS16A_ORYSJ (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica GN=HSP16.9A PE=1 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 4.904e-37 Identity = 78/149 (52.35%), Postives = 97/149 (65.10%), Query Frame = 2 Query: 62 SIFGNRSVFDPFSSDVWAPLGS---------SSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 481 S+ +VFDPFS D+W P S S N+ + FA+A++DWKET E+HVFKADLPG+ +G VL ISG+RS EKEDKNDKWHRVER G+F+RRFRLPENAK+DQVKA +ENGVL +I+I+G Sbjct: 2 SLVRRSNVFDPFSLDLWDPFDSVFRSVVPATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGLENGVLTVTVPKAEVKKPEVKAIEISG 150 The following BLAST results are available for this feature:
BLAST of CN188701 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188701 ID=CN188701; Name=CN188701; organism=Citrus sinensis; type=EST; length=676bpback to top |