CN188701
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188701 vs. ExPASy Swiss-Prot
Match: HS166_ORYSJ (16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP16.6 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.137e-24 Identity = 69/133 (51.88%), Postives = 81/133 (60.90%), Query Frame = 2 Query: 47 MSLIPSIFGNRSVFDPFSSDVWA---PLG---SSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKE--DKND-KWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 418 MSL+ S GN V DP S D WA P G S + + +VDWKET AHVF ADLPG+ DG VL ISGER+ E++ KND +WH VER GKF RRFRLP A++DQV ASM+NGVL Sbjct: 1 MSLVRS--GN--VLDPMSVDFWADADPFGAVRSLAERCPVLTNVRVDWKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASMDNGVL 129
BLAST of CN188701 vs. ExPASy Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.645e-24 Identity = 62/136 (45.59%), Postives = 78/136 (57.35%), Query Frame = 2 Query: 41 AKMSLIPSIFGNRSVF---------DPFSSDVWAPLGSSSNEVS-TFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 418 AK SL+P I ++ DPF P G +E S T + A+VDWKET E HV D+PGL + RVL++SGER E++ K D WHRVER GKF R+F+LP+N +D VKA MENGVL Sbjct: 26 AKASLLPFIDSPNTLLSDLWSDRFPDPFRVLEQIPYGVEKHEPSITLSHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENGVL 161
BLAST of CN188701 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.061e-23 Identity = 57/111 (51.35%), Postives = 68/111 (61.26%), Query Frame = 2 Query: 89 DPFSSDVWAPLGSSSNEVSTFAS-AQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 418 DPF P G +E S S A+VDWKET E HV D+PGL + RVL++SGER E+E K D WHRVER GKF R+FRLP+N +D VKA +ENGVL Sbjct: 43 DPFRVLEHIPFGVDKDEASMAMSPARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVL 153
BLAST of CN188701 vs. ExPASy Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 9.926e-22 Identity = 51/110 (46.36%), Postives = 66/110 (60.00%), Query Frame = 2 Query: 89 DPFSSDVWAPLGSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 418 DPF PLG + + A+VDWKET E H D+PGL + VL++SGER E+E K D+WHRVER GKF R+F+LP+N ++ VKA +ENGVL Sbjct: 48 DPFKILERIPLGLERDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENGVL 157
BLAST of CN188701 vs. ExPASy Swiss-Prot
Match: HSP12_SOYBN (Class I heat shock protein (Fragment) OS=Glycine max GN=HSP6834-A PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.291e-20 Identity = 47/74 (63.51%), Postives = 55/74 (74.32%), Query Frame = 2 Query: 260 VLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 481 +LQISGER+VEKEDKND WHRVER GKF+R FRLP+NAK+DQVKASMENGVL +I+I+G Sbjct: 1 ILQISGERNVEKEDKNDTWHRVERSSGKFMRSFRLPDNAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIEISG 74
BLAST of CN188701 vs. ExPASy Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.213e-19 Identity = 51/130 (39.23%), Postives = 75/130 (57.69%), Query Frame = 2 Query: 41 AKMSLIPSIFGNRSVFDPFSSDVWAPLGSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGER----SVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 418 A+ +P + G + DPF P G ++V+ + A+VDW+ET +AH D+PG+ D RVL+ISGER + E++ D WHR ER G+F R+ RLP+NA +D + AS++NGVL Sbjct: 38 ARDEAVPEL-GLLAAADPFRILEHVPFGFDRDDVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIAASLDNGVL 166
BLAST of CN188701 vs. ExPASy Swiss-Prot
Match: HS189_ORYSJ (18.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.9 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.288e-18 Identity = 43/89 (48.31%), Postives = 60/89 (67.42%), Query Frame = 2 Query: 152 ASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 418 ++A +DWKET AHVF AD+PG+ + +VL+ISG+R+ E+K ++WHRVER +FVR RLP NA D V A+++NGVL Sbjct: 68 STASMDWKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALDNGVL 156
BLAST of CN188701 vs. ExPASy Swiss-Prot
Match: HS17B_ORYSJ (17.9 kDa heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP17.9B PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.142e-16 Identity = 47/123 (38.21%), Postives = 73/123 (59.35%), Query Frame = 2 Query: 83 VFDPFSSDVWAPL---GSS-------SNEVSTFASAQVDWKETREAHVFKADLP-GLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 418 +FD + D W P G++ +++ S FA+ ++ +ET EA+VF+ADLP G+ +G VL I+GERSV +E+K + H +ER F RF LP++A +D V+ASM+ G+L Sbjct: 6 LFDTLAFDAWNPFSIFGTTVAADAWLASDTSAFANTYIESRETAEAYVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATFFGRFHLPDDAVVDLVRASMDGGML 128
BLAST of CN188701 vs. ExPASy Swiss-Prot
Match: HS157_ARATH (15.7 kDa heat shock protein, peroxisomal OS=Arabidopsis thaliana GN=HSP15.7 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.175e-14 Identity = 40/94 (42.55%), Postives = 56/94 (59.57%), Query Frame = 2 Query: 152 ASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVER-----GRGKFVRRFRLPENAKIDQVKASMENGVL 418 ++A +DW E+ +H+FK ++PG +G VL I GE E++ +N WH ER G +F+RR LPEN K+DQVKA +ENGVL Sbjct: 20 STALIDWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAEREAFSGGGSEFLRRIELPENVKVDQVKAYVENGVL 113
BLAST of CN188701 vs. ExPASy Swiss-Prot
Match: HS219_ORYSJ (21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP21.9 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.005e-14 Identity = 51/139 (36.69%), Postives = 77/139 (55.40%), Query Frame = 2 Query: 50 SLIPSIFGNRSVFDPFSSDVWAPL--------GSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXXDG-RVLQISGER-----SVEKEDKND--KWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 418 +L+P +G + DPF +PL +++ E + A A+ DWKET EAHV D+PG+ + RVL++SGER + E+E + D +WHR ER G+F RRFR+P A + +V A +++GVL Sbjct: 29 ALVPYGYGYM-LDDPFRVLEQSPLRPAGGVAAAAAAGEPAAVALARCDWKETPEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGVRWHRAERAAGRFWRRFRMPPGADVGRVAARLDDGVL 166 The following BLAST results are available for this feature:
BLAST of CN188701 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188701 ID=CN188701; Name=CN188701; organism=Citrus sinensis; type=EST; length=676bpback to top |