CN188700
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188700 vs. ExPASy Swiss-Prot
Match: HS166_ORYSJ (16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP16.6 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.030e-23 Identity = 64/128 (50.00%), Postives = 78/128 (60.94%), Query Frame = -1 Query: 319 SIFGNRSVFDPFSSDVWA---PLG---SSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKE--DKND-KWPRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 675 S+ + +V DP S D WA P G S + + +VDWKET AHVF ADLPG+ EDG VL ISGER+ E++ KND +W VER GKF RRFRLP A++DQV ASM+NGVL Sbjct: 2 SLVRSGNVLDPMSVDFWADADPFGAVRSLAERCPVLTNVRVDWKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASMDNGVL 129
BLAST of CN188700 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.531e-22 Identity = 57/111 (51.35%), Postives = 68/111 (61.26%), Query Frame = -1 Query: 319 DPFSSDVWAPLGSSSNEVSTFAS-AQVDWKETREAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWPRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 648 DPF P G +E S S A+VDWKET E HV D+PGL E+ RVL++SGER E+E K D W RVER GKF R+FRLP+N +D VKA +ENGVL Sbjct: 43 DPFRVLEHIPFGVDKDEASMAMSPARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVL 153
BLAST of CN188700 vs. ExPASy Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.531e-22 Identity = 56/111 (50.45%), Postives = 69/111 (62.16%), Query Frame = -1 Query: 319 DPFSSDVWAPLGSSSNEVS-TFASAQVDWKETREAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWPRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 648 DPF P G +E S T + A+VDWKET E HV D+PGL E+ RVL++SGER E++ K D W RVER GKF R+F+LP+N +D VKA MENGVL Sbjct: 51 DPFRVLEQIPYGVEKHEPSITLSHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENGVL 161
BLAST of CN188700 vs. ExPASy Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.433e-20 Identity = 51/110 (46.36%), Postives = 66/110 (60.00%), Query Frame = -1 Query: 319 DPFSSDVWAPLGSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWPRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 648 DPF PLG + + A+VDWKET E H D+PGL E+ VL++SGER E+E K D+W RVER GKF R+F+LP+N ++ VKA +ENGVL Sbjct: 48 DPFKILERIPLGLERDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENGVL 157
BLAST of CN188700 vs. ExPASy Swiss-Prot
Match: HSP12_SOYBN (Class I heat shock protein (Fragment) OS=Glycine max GN=HSP6834-A PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.342e-18 Identity = 47/74 (63.51%), Postives = 55/74 (74.32%), Query Frame = -1 Query: 256 VLQISGERSVEKEDKNDKWPRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXKSIQITG 477 +LQISGER+VEKEDKND W RVER GKF+R FRLP+NAK+DQVKASMENGVL K+I+I+G Sbjct: 1 ILQISGERNVEKEDKNDTWHRVERSSGKFMRSFRLPDNAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIEISG 74
BLAST of CN188700 vs. ExPASy Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 2.989e-18 Identity = 48/114 (42.11%), Postives = 68/114 (59.65%), Query Frame = -1 Query: 319 DPFSSDVWAPLGSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXEDGRVLQISGER----SVEKEDKNDKWPRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 648 DPF P G ++V+ + A+VDW+ET +AH D+PG+ ED RVL+ISGER + E++ D W R ER G+F R+ RLP+NA +D + AS++NGVL Sbjct: 53 DPFRILEHVPFGFDRDDVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIAASLDNGVL 166
BLAST of CN188700 vs. ExPASy Swiss-Prot
Match: HS189_ORYSJ (18.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.9 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.304e-17 Identity = 43/89 (48.31%), Postives = 60/89 (67.42%), Query Frame = -1 Query: 319 ASAQVDWKETREAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWPRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 585 ++A +DWKET AHVF AD+PG+ E+ +VL+ISG+R+ E+K ++W RVER +FVR RLP NA D V A+++NGVL Sbjct: 68 STASMDWKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALDNGVL 156
BLAST of CN188700 vs. ExPASy Swiss-Prot
Match: HS17B_ORYSJ (17.9 kDa heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP17.9B PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.093e-15 Identity = 46/123 (37.40%), Postives = 73/123 (59.35%), Query Frame = -1 Query: 319 VFDPFSSDVWAPL---GSS-------SNEVSTFASAQVDWKETREAHVFKADLP-GLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWPRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 654 +FD + D W P G++ +++ S FA+ ++ +ET EA+VF+ADLP G+ ++G VL I+GERSV +E+K + +ER F RF LP++A +D V+ASM+ G+L Sbjct: 6 LFDTLAFDAWNPFSIFGTTVAADAWLASDTSAFANTYIESRETAEAYVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATFFGRFHLPDDAVVDLVRASMDGGML 128
BLAST of CN188700 vs. ExPASy Swiss-Prot
Match: HS157_ARATH (15.7 kDa heat shock protein, peroxisomal OS=Arabidopsis thaliana GN=HSP15.7 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.697e-13 Identity = 40/94 (42.55%), Postives = 56/94 (59.57%), Query Frame = -1 Query: 319 ASAQVDWKETREAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWPRVER-----GRGKFVRRFRLPENAKIDQVKASMENGVL 585 ++A +DW E+ +H+FK ++PG E+G VL I GE E++ +N W ER G +F+RR LPEN K+DQVKA +ENGVL Sbjct: 20 STALIDWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAEREAFSGGGSEFLRRIELPENVKVDQVKAYVENGVL 113
BLAST of CN188700 vs. ExPASy Swiss-Prot
Match: HS219_ORYSJ (21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP21.9 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.781e-13 Identity = 47/126 (37.30%), Postives = 70/126 (55.56%), Query Frame = -1 Query: 319 DPFSSDVWAPL--------GSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXEDG-RVLQISGER-----SVEKEDKND--KWPRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 648 DPF +PL +++ E + A A+ DWKET EAHV D+PG+ ++ RVL++SGER + E+E + D +W R ER G+F RRFR+P A + +V A +++GVL Sbjct: 41 DPFRVLEQSPLRPAGGVAAAAAAGEPAAVALARCDWKETPEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGVRWHRAERAAGRFWRRFRMPPGADVGRVAARLDDGVL 166 The following BLAST results are available for this feature:
BLAST of CN188700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188700 ID=CN188700; Name=CN188700; organism=Citrus sinensis; type=EST; length=675bpback to top |