CN181732
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODF_RICFE (Superoxide dismutase [Mn/Fe] OS=Rickettsia felis GN=sodB PE=3 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 5.766e-17 Identity = 39/92 (42.39%), Postives = 53/92 (57.61%), Query Frame = -2 Query: 213 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 488 QFGSGWAWLVY D L ++KT NA P+ PLL DVWEHAYY+D++N+RPDY+ +F+ +++W+ V L Sbjct: 134 QFGSGWAWLVYH------------------DNRLQIIKTANAGTPIANGMKPLLACDVWEHAYYIDYRNKRPDYVDIFIKHMINWKFVEDNL 207
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_BACHD (Superoxide dismutase [Mn] OS=Bacillus halodurans GN=sodA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.531e-17 Identity = 44/96 (45.83%), Postives = 57/96 (59.38%), Query Frame = -2 Query: 201 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 488 +FGSGWAWLV D L + TPN PL+ +P+L +DVWEHAYYL++QNRRPDYIS F + +V+W+ V+KR AK Sbjct: 126 RFGSGWAWLVVN------------------DGKLEITSTPNQDTPLMEGKTPILGLDVWEHAYYLNYQNRRPDYISAFWN-VVNWDEVAKRYNEAK 202
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_DEIRA (Superoxide dismutase [Mn] OS=Deinococcus radiodurans GN=sodA PE=1 SV=3) HSP 1 Score: 86.2705 bits (212), Expect = 1.285e-16 Identity = 47/103 (45.63%), Postives = 62/103 (60.19%), Query Frame = -2 Query: 201 TQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDY------SPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 491 T+FGSGWAWLV K D L VV T N NPL+ + +P+L +DVWEHAYYL++QNRRPDY++ F + +V+W+ VSKR +AK Sbjct: 128 TRFGSGWAWLVVK------------------DGKLDVVSTANQDNPLMGEAIAGVSGTPILGVDVWEHAYYLNYQNRRPDYLAAFWN-VVNWDEVSKRYAAAK 211
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODF_ANASP (Superoxide dismutase [Fe] OS=Anabaena sp. (strain PCC 7120) GN=sodB PE=3 SV=3) HSP 1 Score: 86.2705 bits (212), Expect = 1.285e-16 Identity = 41/87 (47.13%), Postives = 52/87 (59.77%), Query Frame = -2 Query: 231 TQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWE 491 TQFGSGWAWL+ + +L V KTPNA NPL LLT+DVWEHAYY+DF+N RP +I ++D LV+W+ Sbjct: 123 TQFGSGWAWLI------------------DDGGTLKVTKTPNAENPLAHGQKALLTLDVWEHAYYIDFRNARPAFIKNYLDNLVNWD 191
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_STACA (Superoxide dismutase [Mn/Fe] OS=Staphylococcus carnosus GN=sodA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.678e-16 Identity = 43/95 (45.26%), Postives = 56/95 (58.95%), Query Frame = -2 Query: 204 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESA 488 QFGSGWAWLV +KD L +V TPN NP+ +P+L +DVWEHAYYL +QN+RPDYI F + +V+W V + E+A Sbjct: 123 QFGSGWAWLVV-----------------DKDGKLEIVSTPNQDNPITEGKTPILGLDVWEHAYYLKYQNKRPDYIDAFWN-VVNWNKVDELYEAA 199
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_STAS1 (Superoxide dismutase [Mn/Fe] OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=sodA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 8.326e-16 Identity = 43/96 (44.79%), Postives = 57/96 (59.38%), Query Frame = -2 Query: 201 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 488 +FGSGWAWLV + +L +V TPN NPL +P+L +DVWEHAYYL +QN+RPDYIS F + +V+WE V + +AK Sbjct: 123 RFGSGWAWLVVN------------------NGNLEIVTTPNQDNPLTEGKTPILGLDVWEHAYYLKYQNKRPDYISAFWN-VVNWEKVDELYNAAK 199
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_STAEP (Superoxide dismutase [Mn/Fe] OS=Staphylococcus epidermidis GN=sodA PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.087e-15 Identity = 43/96 (44.79%), Postives = 56/96 (58.33%), Query Frame = -2 Query: 201 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 488 +FGSGWAWLV + L +V TPN NPL +P+L +DVWEHAYYL +QN+RPDYIS F + +V+WE V + +AK Sbjct: 123 RFGSGWAWLVVN------------------NGQLEIVTTPNQDNPLTEGKTPILGLDVWEHAYYLKYQNKRPDYISAFWN-VVNWEKVDELYNAAK 199
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_BACCA (Superoxide dismutase [Mn] OS=Bacillus caldotenax GN=sodA PE=3 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.087e-15 Identity = 41/97 (42.27%), Postives = 58/97 (59.79%), Query Frame = -2 Query: 198 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 488 +FGSGWAWLV + L + TPN +P++ +P+L +DVWEHAYYL +QNRRP+YI+ F + +V+W+ V+KR AKA Sbjct: 126 RFGSGWAWLVVN------------------NGELEITSTPNQDSPIMEGKTPILGLDVWEHAYYLKYQNRRPEYIAAFWN-IVNWDEVAKRYSEAKA 203
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_STAXY (Superoxide dismutase [Mn/Fe] OS=Staphylococcus xylosus GN=sodA PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.420e-15 Identity = 42/96 (43.75%), Postives = 57/96 (59.38%), Query Frame = -2 Query: 201 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 488 +FGSGWAWLV + +L +V TPN NP+ +P+L +DVWEHAYYL +QN+RPDYIS F + +V+WE V + +AK Sbjct: 123 RFGSGWAWLVVN------------------NGNLEIVTTPNQDNPITEGKTPILGLDVWEHAYYLKYQNKRPDYISAFWN-VVNWEKVDELYNAAK 199
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_BACST (Superoxide dismutase [Mn] OS=Bacillus stearothermophilus GN=sodA PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.420e-15 Identity = 41/97 (42.27%), Postives = 58/97 (59.79%), Query Frame = -2 Query: 198 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 488 +FGSGWAWLV + L + TPN +P++ +P+L +DVWEHAYYL +QNRRP+YI+ F + +V+W+ V+KR AKA Sbjct: 126 RFGSGWAWLVVN------------------NGELEITSTPNQDSPIMEGKTPILGLDVWEHAYYLKYQNRRPEYIAAFWN-VVNWDEVAKRYSEAKA 203 The following BLAST results are available for this feature:
BLAST of CN181732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181732 ID=CN181732; Name=CN181732; organism=Citrus sinensis; type=EST; length=597bpback to top |