CN181732
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_THET8 (Superoxide dismutase [Mn] OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=sodA PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 9.527e-12 Identity = 35/95 (36.84%), Postives = 53/95 (55.79%), Query Frame = -2 Query: 204 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESA 488 +FGSGWAWLV + L V+ TPN NP++ ++P++ IDVWEHAYYL +QNRR DY+ + +++W+ + + A Sbjct: 128 RFGSGWAWLV-----------------KDPFGKLHVLSTPNQDNPVMEGFTPIVGIDVWEHAYYLKYQNRRADYLQAIWN-VLNWDVAEEFFKKA 204
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_THET2 (Superoxide dismutase [Mn] OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=sodA PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 9.527e-12 Identity = 35/95 (36.84%), Postives = 53/95 (55.79%), Query Frame = -2 Query: 204 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESA 488 +FGSGWAWLV + L V+ TPN NP++ ++P++ IDVWEHAYYL +QNRR DY+ + +++W+ + + A Sbjct: 128 RFGSGWAWLV-----------------KDPFGKLHVLSTPNQDNPVMEGFTPIVGIDVWEHAYYLKYQNRRADYLQAIWN-VLNWDVAEEFFKKA 204
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_DICDI (Superoxide dismutase [Mn], mitochondrial OS=Dictyostelium discoideum GN=sod2 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.244e-11 Identity = 39/95 (41.05%), Postives = 54/95 (56.84%), Query Frame = -2 Query: 201 GSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPL-VWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 482 GSGW WL Y +K LV++T +PL V Y PLL IDVWEHAYYLD++N R DY+ ++V+W++V++R +AK Sbjct: 149 GSGWGWLGY-----------------DKANDRLVIQTQQNQDPLSVSGYVPLLGIDVWEHAYYLDYKNVRADYVKNIW-QIVNWKNVAERYNTAK 225
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODF_PHOLE (Superoxide dismutase [Fe] OS=Photobacterium leiognathi GN=sodB PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.625e-11 Identity = 38/92 (41.30%), Postives = 51/92 (55.43%), Query Frame = -2 Query: 213 FGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWD-YSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 485 FGS W WLV + SL +V T NA P+ + +PLLT+D+WEHAYY+D++N RP Y+ F LV+W+ VSK L Sbjct: 118 FGSSWTWLV-----------------KNANGSLAIVNTSNAGCPITEEGVTPLLTVDLWEHAYYIDYRNLRPSYMDGFW-ALVNWDFVSKNL 191
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODF_PORGI (Superoxide dismutase [Mn/Fe] OS=Porphyromonas gingivalis GN=sodB PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 2.772e-11 Identity = 37/92 (40.22%), Postives = 47/92 (51.09%), Query Frame = -2 Query: 216 TQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 491 T FGSGW WL S+ + L + K PNA NP+ +PLL DVWEHAYYL +QNRR D++ +V W+ V R Sbjct: 117 TLFGSGWVWLA-----------------SDANGKLSIEKEPNAGNPVRKGLNPLLGFDVWEHAYYLTYQNRRADHLKDLW-SIVDWDIVESR 190
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM1_PLEBO (Superoxide dismutase [Mn] 1 OS=Plectonema boryanum GN=sodA1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.620e-11 Identity = 37/98 (37.76%), Postives = 58/98 (59.18%), Query Frame = -2 Query: 201 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYS--PLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 488 +FGSGWAWLV S++ L + T N NPL+ + + P+L DVWEHAYYL +QNRR +Y++ + + +V+W++V++R A+ Sbjct: 167 RFGSGWAWLV-----------------SDRQGKLSITSTANQDNPLMSNPNAYPILGNDVWEHAYYLKYQNRRAEYLTNWWN-VVNWQAVNQRYAQAQ 246
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODF_ENTHI (Superoxide dismutase [Fe] OS=Entamoeba histolytica GN=SODB PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.620e-11 Identity = 36/91 (39.56%), Postives = 50/91 (54.95%), Query Frame = -2 Query: 213 FGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 485 FGSGW WLV E D L ++ T +AVNP+ PLLT DVWEHAYY+D +N R Y+ + + +V+W+ V ++L Sbjct: 119 FGSGWCWLV------------------EHDGKLEIIDTHDAVNPMTNGMKPLLTCDVWEHAYYIDTRNNRAAYLEHWWN-VVNWKFVEEQL 190
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_THEAQ (Superoxide dismutase [Mn] OS=Thermus aquaticus GN=sodA PE=3 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 4.728e-11 Identity = 33/86 (38.37%), Postives = 49/86 (56.98%), Query Frame = -2 Query: 231 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWE 488 +FGSGWAWLV + L V+ T N NP++ ++P++ IDVWEHAYYL +QNRR DY+ + +++W+ Sbjct: 128 RFGSGWAWLV-----------------KDPFGKLHVISTANQDNPVMGGFAPIVGIDVWEHAYYLKYQNRRADYLQAIWN-VLNWD 195
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM3_PLEBO (Superoxide dismutase [Mn] 3 (Fragment) OS=Plectonema boryanum GN=sodA3 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.728e-11 Identity = 34/95 (35.79%), Postives = 52/95 (54.74%), Query Frame = -2 Query: 204 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESA 488 +FGSGW WLV L +V T N NP++ P++ DVWEHAYYL +QNRR DY++ + + +V+W +++R ++A Sbjct: 156 RFGSGWVWLV-----------------RNAQGQLQIVSTANQDNPIMEGNYPIMGNDVWEHAYYLRYQNRRADYLNNWWN-VVNWNEINRRFQAA 232
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODF_HELPY (Superoxide dismutase [Fe] OS=Helicobacter pylori GN=sodB PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.065e-11 Identity = 44/123 (35.77%), Postives = 58/123 (47.15%), Query Frame = -2 Query: 201 D*LKGIL----GSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 557 D LKG L GS T FGSGW W Y L ++K + +++T NA P+ PLL +DVWEHAYY+D +N RP Y+ F ++W VS+ E AK Sbjct: 89 DELKGALEKDFGSLEKFKEDFIKSATTLFGSGWNWAAYN-------------LDTQK---IEIIQTSNAQTPVTDKKVPLLVVDVWEHAYYIDHKNARPVYLEKFYGH-INWHFVSQCYEWAK 194 The following BLAST results are available for this feature:
BLAST of CN181732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181732 ID=CN181732; Name=CN181732; organism=Citrus sinensis; type=EST; length=597bpback to top |