CN181732
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM1_STAAB (Superoxide dismutase [Mn/Fe] 1 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=sodA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.206e-15 Identity = 41/96 (42.71%), Postives = 54/96 (56.25%), Query Frame = -2 Query: 201 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 488 +FGSGWAWLV + L +V TPN NPL +P+L +DVWEHAYYL +QN+RPDYI F + +V+WE V + + K Sbjct: 123 RFGSGWAWLVVN------------------NGQLEIVTTPNQDNPLTEGKTPILGLDVWEHAYYLKYQNKRPDYIGAFWN-VVNWEKVDELYNATK 199
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM1_STAA8 (Superoxide dismutase [Mn] 1 OS=Staphylococcus aureus (strain NCTC 8325) GN=sodA PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.206e-15 Identity = 41/96 (42.71%), Postives = 54/96 (56.25%), Query Frame = -2 Query: 201 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 488 +FGSGWAWLV + L +V TPN NPL +P+L +DVWEHAYYL +QN+RPDYI F + +V+WE V + + K Sbjct: 123 RFGSGWAWLVVN------------------NGQLEIVTTPNQDNPLTEGKTPILGLDVWEHAYYLKYQNKRPDYIGAFWN-VVNWEKVDELYNATK 199
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM1_STAA3 (Superoxide dismutase [Mn/Fe] 1 OS=Staphylococcus aureus (strain USA300) GN=sodA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.206e-15 Identity = 41/96 (42.71%), Postives = 54/96 (56.25%), Query Frame = -2 Query: 201 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 488 +FGSGWAWLV + L +V TPN NPL +P+L +DVWEHAYYL +QN+RPDYI F + +V+WE V + + K Sbjct: 123 RFGSGWAWLVVN------------------NGQLEIVTTPNQDNPLTEGKTPILGLDVWEHAYYLKYQNKRPDYIGAFWN-VVNWEKVDELYNATK 199
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODF_LEGPH (Superoxide dismutase [Fe] OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=sodB PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.202e-14 Identity = 40/94 (42.55%), Postives = 53/94 (56.38%), Query Frame = -2 Query: 210 TQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 491 T FGSGWAWLV ++ +L ++ T NA P+ + LLT DVWEHAYY+D++NRRPDYI F LV+W+ S L+ Sbjct: 117 TTFGSGWAWLV-----------------QDQSGALKIINTSNAGTPMTEGLNALLTCDVWEHAYYIDYRNRRPDYIEAFW-SLVNWDFASSNLK 192
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_LISIN (Superoxide dismutase [Mn] OS=Listeria innocua GN=sodA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.570e-14 Identity = 41/96 (42.71%), Postives = 56/96 (58.33%), Query Frame = -2 Query: 201 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 488 +FGSGWAWLV + L +V T N +PL +P+L +DVWEHAYYL FQNRRP+YI F + +V+W+ +KR ++AK Sbjct: 126 RFGSGWAWLVVN------------------NGKLEIVSTANQDSPLSDGKTPVLGLDVWEHAYYLKFQNRRPEYIDTFWN-VVNWDEANKRFDAAK 202
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM2_STAAB (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=sodM PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.570e-14 Identity = 40/97 (41.24%), Postives = 55/97 (56.70%), Query Frame = -2 Query: 201 TQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 491 T FGSGW WLV + L +V TPN NPL +P+L DVWEHAYYL +QN+RPDY++ F + +V+W+ V + ++AK Sbjct: 122 TLFGSGWTWLVVN------------------NGKLEIVTTPNQDNPLTEGKTPILLFDVWEHAYYLKYQNKRPDYMTAFWN-IVNWKKVDELYQAAK 199
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_XANCP (Superoxide dismutase [Mn] OS=Xanthomonas campestris pv. campestris GN=sodA PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.051e-14 Identity = 41/98 (41.84%), Postives = 56/98 (57.14%), Query Frame = -2 Query: 198 TQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 491 ++FGSGWAWL DK ++V T N +PL +P+L +DVWEHAYYL +QNRRPDYI F + +V+W+ V +R +A A Sbjct: 124 SRFGSGWAWLSVTP-----------------DKKVVVESTANQDSPLFEGNTPILGLDVWEHAYYLKYQNRRPDYIGAFYN-VVNWDEVERRYHAAIA 203
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_XANC8 (Superoxide dismutase [Mn] OS=Xanthomonas campestris pv. campestris (strain 8004) GN=sodA PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.051e-14 Identity = 41/98 (41.84%), Postives = 56/98 (57.14%), Query Frame = -2 Query: 198 TQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 491 ++FGSGWAWL DK ++V T N +PL +P+L +DVWEHAYYL +QNRRPDYI F + +V+W+ V +R +A A Sbjct: 124 SRFGSGWAWLSVTP-----------------DKKVVVESTANQDSPLFEGNTPILGLDVWEHAYYLKYQNRRPDYIGAFYN-VVNWDEVERRYHAAIA 203
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_YEREN (Superoxide dismutase [Mn] OS=Yersinia enterocolitica GN=sodA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.678e-14 Identity = 44/103 (42.72%), Postives = 56/103 (54.37%), Query Frame = -2 Query: 201 TQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYS------PLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 491 T+FGSGWAWLV K D L VV T N +PL+ + P++ +DVWEHAYYL FQNRRPDYI F + +V+W+ + R AK Sbjct: 123 TRFGSGWAWLVLKD-----------------DGKLAVVSTANQDSPLMGEAVSGASGFPIVGLDVWEHAYYLKFQNRRPDYIKAFWN-VVNWDEAAARFAQAK 207
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_HAEIN (Superoxide dismutase [Mn] OS=Haemophilus influenzae GN=sodA PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 2.678e-14 Identity = 46/104 (44.23%), Postives = 57/104 (54.81%), Query Frame = -2 Query: 198 TQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVW------DYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 491 T+FGSGWAWLV + L VV T N NPL+ + PLL +DVWEHAYYL FQNRRPDYI F + +V+W+ V++R E A Sbjct: 124 TRFGSGWAWLVLTA-----------------EGKLAVVSTANQDNPLMGKEVAGCEGFPLLGLDVWEHAYYLKFQNRRPDYIKEFWN-VVNWDFVAERFEQKTA 209 The following BLAST results are available for this feature:
BLAST of CN181732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181732 ID=CN181732; Name=CN181732; organism=Citrus sinensis; type=EST; length=597bpback to top |