CN181732
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_BORBU (Superoxide dismutase [Fe] OS=Borrelia burgdorferi GN=sod PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.678e-14 Identity = 40/89 (44.94%), Postives = 51/89 (57.30%), Query Frame = -2 Query: 219 FGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSK 485 FGSGWAWLV + L V+ PN +PL+ Y P+L IDVWEHAYYL +QNRR +Y+ F+ K ++WE VSK Sbjct: 126 FGSGWAWLVLCP-----------------ESGLKVISMPNQDSPLMNSYKPILGIDVWEHAYYLKYQNRRIEYVDAFL-KALNWEEVSK 196
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_LISIV (Superoxide dismutase [Mn] OS=Listeria ivanovii GN=sodA PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.498e-14 Identity = 40/96 (41.67%), Postives = 56/96 (58.33%), Query Frame = -2 Query: 201 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 488 +FGSGWAWLV + L +V T N +PL +P+L +DVWEHAYYL FQNRRP+YI F + +++W+ +KR ++AK Sbjct: 126 RFGSGWAWLVVN------------------NGKLEIVSTANQDSPLSEGKTPVLGLDVWEHAYYLKFQNRRPEYIDTFWN-VINWDERNKRFDAAK 202
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_HAEDU (Superoxide dismutase [Mn] OS=Haemophilus ducreyi GN=sodA PE=3 SV=4) HSP 1 Score: 77.411 bits (189), Expect = 5.967e-14 Identity = 42/104 (40.38%), Postives = 57/104 (54.81%), Query Frame = -2 Query: 198 TQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVW------DYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 491 T+FGSGWAWLV + + L VV T N +P++ P+ T+DVWEHAYYL +QNRRPDYI F + +V+W+ S+R E +A Sbjct: 123 TRFGSGWAWLVLE------------------EGKLAVVSTANQDSPIMGKDVAGVSGYPIFTLDVWEHAYYLHYQNRRPDYIKAFWN-VVNWDEASRRFEEKQA 207
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODF_BACFR (Superoxide dismutase [Fe] OS=Bacteroides fragilis GN=sodB PE=3 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 7.793e-14 Identity = 39/91 (42.86%), Postives = 50/91 (54.95%), Query Frame = -2 Query: 213 FGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 485 FGSGWAWL +KD L + K PN NP+ PLL DVWEHAYYLD+QNRR D+++ + ++ W+ V KRL Sbjct: 121 FGSGWAWLSV-----------------DKDGKLHITKEPNGSNPVRAGLKPLLGFDVWEHAYYLDYQNRRADHVNKLWE-IIDWDVVEKRL 193
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_CHLRE (Superoxide dismutase [Mn], mitochondrial OS=Chlamydomonas reinhardtii GN=SODA PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.018e-13 Identity = 43/103 (41.75%), Postives = 59/103 (57.28%), Query Frame = -2 Query: 198 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYS------PLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 488 +FGSGWAWL K D SL + TPN NPL+ PLL +DVWEHAYYL +QNRRP+YI+ + + +V+WE V++ ++A+A Sbjct: 129 RFGSGWAWLSVKP-----------------DGSLSIDSTPNQDNPLMTALPDVAGGIPLLGLDVWEHAYYLKYQNRRPEYIAAWWN-VVNWEQVAENYKAAQA 213
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM2_PLEBO (Superoxide dismutase [Mn] 2 OS=Plectonema boryanum GN=sodA2 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.018e-13 Identity = 34/95 (35.79%), Postives = 58/95 (61.05%), Query Frame = -2 Query: 204 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESA 488 +FGSGW WLV + L ++ TPN +PL+ ++P++ DVWEHAYYL +QNRRP+Y++ + + +++WE +++R ++A Sbjct: 126 RFGSGWVWLV-----------------RSQQGDLQILSTPNQDSPLIEGHTPIMGNDVWEHAYYLKYQNRRPEYLNAWWN-VLNWEEINRRFDAA 202
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_SALTY (Superoxide dismutase [Mn] OS=Salmonella typhimurium GN=sodA PE=3 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 2.267e-13 Identity = 45/103 (43.69%), Postives = 57/103 (55.34%), Query Frame = -2 Query: 201 TQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYS------PLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 491 T+FGSGWAWLV K DK L VV T N +PL+ + P+L +DVWEHAYYL FQNRRPDYI F + +V+W+ + R + K Sbjct: 123 TRFGSGWAWLVLKG-----------------DK-LAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQNRRPDYIKEFWN-VVNWDEAAARFAAKK 206
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_SALTI (Superoxide dismutase [Mn] OS=Salmonella typhi GN=sodA PE=3 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 2.267e-13 Identity = 45/103 (43.69%), Postives = 57/103 (55.34%), Query Frame = -2 Query: 201 TQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYS------PLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 491 T+FGSGWAWLV K DK L VV T N +PL+ + P+L +DVWEHAYYL FQNRRPDYI F + +V+W+ + R + K Sbjct: 123 TRFGSGWAWLVLKG-----------------DK-LAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQNRRPDYIKEFWN-VVNWDEAAARFAAKK 206
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_PASMU (Superoxide dismutase [Mn] OS=Pasteurella multocida GN=sodA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.267e-13 Identity = 43/100 (43.00%), Postives = 57/100 (57.00%), Query Frame = -2 Query: 210 TQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVW------DYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 491 T+FGSGWAWLV +++ L VV T N +P++ + PLL +DVWEHAYYL FQNRRPDYI F +V+W+ V++R E Sbjct: 123 TRFGSGWAWLVL-----------------QENGKLAVVSTANQDSPVMGKAIAGCEGYPLLGLDVWEHAYYLKFQNRRPDYIKEFW-HVVNWDFVAERFE 204
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODF_PSEAE (Superoxide dismutase [Fe] OS=Pseudomonas aeruginosa GN=sodB PE=3 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 2.267e-13 Identity = 40/89 (44.94%), Postives = 50/89 (56.18%), Query Frame = -2 Query: 219 FGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSK 485 FGSGW WLV K D SL + T A NPL +PLLT DVWEHAYY+D++N RP Y+ F + LV+W+ V+K Sbjct: 119 FGSGWGWLVKKA-----------------DGSLALASTIGAGNPLTSGDTPLLTCDVWEHAYYIDYRNLRPKYVEAFWN-LVNWDFVAK 189 The following BLAST results are available for this feature:
BLAST of CN181732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181732 ID=CN181732; Name=CN181732; organism=Citrus sinensis; type=EST; length=597bpback to top |