CN181732
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_PASHA (Superoxide dismutase [Mn] OS=Pasteurella haemolytica GN=sodA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.597e-13 Identity = 41/104 (39.42%), Postives = 56/104 (53.85%), Query Frame = -2 Query: 198 TQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYS------PLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 491 T+ GSGWAWLV + + L VV T N NPL+ P+L +DVWEHAYYL++QNRRPD+I F + +V+W+ ++R E A Sbjct: 123 TRVGSGWAWLVLE------------------EGKLAVVSTANQDNPLMGKEVAGVSGYPILVLDVWEHAYYLNYQNRRPDFIKAFWN-VVNWDEAARRFEEKVA 207
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_ECO57 (Superoxide dismutase [Mn] OS=Escherichia coli O157:H7 GN=sodA PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 6.597e-13 Identity = 44/103 (42.72%), Postives = 57/103 (55.34%), Query Frame = -2 Query: 201 TQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYS------PLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 491 ++FGSGWAWLV K DK L VV T N +PL+ + P+L +DVWEHAYYL FQNRRPDYI F + +V+W+ + R + K Sbjct: 123 SRFGSGWAWLVLKG-----------------DK-LAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQNRRPDYIKEFWN-VVNWDEAAARFAAKK 206
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_ACIAD (Superoxide dismutase [Mn] OS=Acinetobacter sp. (strain ADP1) GN=sodA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.597e-13 Identity = 45/100 (45.00%), Postives = 55/100 (55.00%), Query Frame = -2 Query: 204 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYS-----PLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESA 488 +FGSGWAWL+ P+ K L V TPN NPL+ D S PLL +DVWEHAYYL +QNRR DYI F +V+W V++R A Sbjct: 145 RFGSGWAWLIVT--------------PNGK---LAVTSTPNQDNPLM-DLSETKGTPLLGLDVWEHAYYLKYQNRRADYIKAFW-SVVNWNKVNERYNEA 225
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_STRP8 (Superoxide dismutase [Mn] OS=Streptococcus pyogenes serotype M18 GN=sodA PE=3 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 8.616e-13 Identity = 36/96 (37.50%), Postives = 54/96 (56.25%), Query Frame = -2 Query: 201 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 488 +FGSGWAWLV K+ L + T N P+ P+L +DVWEHAYYL+++N RP+YI F + +++W+ VS+ ++AK Sbjct: 124 RFGSGWAWLVVN-----------------KEGQLEITSTANQDTPISEGKKPILALDVWEHAYYLNYRNVRPNYIKAFFE-IINWKKVSELYQAAK 201
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_STRP6 (Superoxide dismutase [Mn] OS=Streptococcus pyogenes serotype M6 GN=sodA PE=3 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 8.616e-13 Identity = 36/96 (37.50%), Postives = 54/96 (56.25%), Query Frame = -2 Query: 201 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 488 +FGSGWAWLV K+ L + T N P+ P+L +DVWEHAYYL+++N RP+YI F + +++W+ VS+ ++AK Sbjct: 124 RFGSGWAWLVVN-----------------KEGQLEITSTANQDTPISEGKKPILALDVWEHAYYLNYRNVRPNYIKAFFE-IINWKKVSELYQAAK 201
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_STRP3 (Superoxide dismutase [Mn] OS=Streptococcus pyogenes serotype M3 GN=sodA PE=3 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 8.616e-13 Identity = 36/96 (37.50%), Postives = 54/96 (56.25%), Query Frame = -2 Query: 201 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 488 +FGSGWAWLV K+ L + T N P+ P+L +DVWEHAYYL+++N RP+YI F + +++W+ VS+ ++AK Sbjct: 124 RFGSGWAWLVVN-----------------KEGQLEITSTANQDTPISEGKKPILALDVWEHAYYLNYRNVRPNYIKAFFE-IINWKKVSELYQAAK 201
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_ECOLI (Superoxide dismutase [Mn] OS=Escherichia coli (strain K12) GN=sodA PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.125e-12 Identity = 43/103 (41.75%), Postives = 57/103 (55.34%), Query Frame = -2 Query: 201 TQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYS------PLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 491 ++FGSGWAWLV K DK L VV T N +PL+ + P++ +DVWEHAYYL FQNRRPDYI F + +V+W+ + R + K Sbjct: 123 SRFGSGWAWLVLKG-----------------DK-LAVVSTANQDSPLMGEAISGASGFPIMGLDVWEHAYYLKFQNRRPDYIKEFWN-VVNWDEAAARFAAKK 206
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_STRPY (Superoxide dismutase [Mn] OS=Streptococcus pyogenes GN=sodA PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.470e-12 Identity = 36/96 (37.50%), Postives = 53/96 (55.21%), Query Frame = -2 Query: 201 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 488 +FGSGWAWLV K+ L + T N P+ P+L +DVWEHAYYL+++N RP+YI F + +++W+ VS ++AK Sbjct: 124 RFGSGWAWLVVN-----------------KEGQLEITSTANQDTPISEGKKPILALDVWEHAYYLNYRNVRPNYIKAFFE-IINWKKVSALYQAAK 201
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_STRMU (Superoxide dismutase [Mn/Fe] OS=Streptococcus mutans GN=sodA PE=1 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 1.470e-12 Identity = 35/91 (38.46%), Postives = 52/91 (57.14%), Query Frame = -2 Query: 219 TQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSK 491 T+FGSGWAWLV +K+ L V T N P+ P+L +DVWEHAYYL+++N RP+YI F + +++W +V++ Sbjct: 123 TRFGSGWAWLVV-----------------DKEGKLEVTSTANQDTPISQGLKPILALDVWEHAYYLNYRNVRPNYIKAFFE-VINWNTVAR 195
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODF_COXBU (Superoxide dismutase [Fe] OS=Coxiella burnetii GN=sodB PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.470e-12 Identity = 38/93 (40.86%), Postives = 52/93 (55.91%), Query Frame = -2 Query: 207 FGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLES 485 FGSGWAWLV + + L V+ T NA NP+ PL+T DVWEHAYY+D +N RP Y++ F ++V+W+ V K +S Sbjct: 119 FGSGWAWLV-----------------KDNNGKLEVLSTVNARNPMTEGKKPLMTCDVWEHAYYIDTRNDRPKYVNNFW-QVVNWDFVMKNFKS 193 The following BLAST results are available for this feature:
BLAST of CN181732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181732 ID=CN181732; Name=CN181732; organism=Citrus sinensis; type=EST; length=597bpback to top |