CN181732
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_STRAG (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae GN=sodA PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.920e-12 Identity = 36/97 (37.11%), Postives = 55/97 (56.70%), Query Frame = -2 Query: 198 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 488 +FGSGWAWLV + L V+ T N P++ P+L +DVWEHAYYL+++N RP+YI F + +++W V++ ++AKA Sbjct: 124 RFGSGWAWLVVNA-----------------EGKLEVLSTANQDTPIMEGKKPILGLDVWEHAYYLNYRNVRPNYIKAFFE-IINWNKVNELYQAAKA 202
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_STRA5 (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae serotype V GN=sodA PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.920e-12 Identity = 36/97 (37.11%), Postives = 55/97 (56.70%), Query Frame = -2 Query: 198 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 488 +FGSGWAWLV + L V+ T N P++ P+L +DVWEHAYYL+++N RP+YI F + +++W V++ ++AKA Sbjct: 124 RFGSGWAWLVVNA-----------------EGKLEVLSTANQDTPIMEGKKPILGLDVWEHAYYLNYRNVRPNYIKAFFE-IINWNKVNELYQAAKA 202
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_STRA3 (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae serotype III GN=sodA PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.920e-12 Identity = 36/97 (37.11%), Postives = 55/97 (56.70%), Query Frame = -2 Query: 198 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 488 +FGSGWAWLV + L V+ T N P++ P+L +DVWEHAYYL+++N RP+YI F + +++W V++ ++AKA Sbjct: 124 RFGSGWAWLVVNA-----------------EGKLEVLSTANQDTPIMEGKKPILGLDVWEHAYYLNYRNVRPNYIKAFFE-IINWNKVNELYQAAKA 202
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_BORPE (Superoxide dismutase [Mn] OS=Bordetella pertussis GN=sodA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.920e-12 Identity = 40/97 (41.24%), Postives = 55/97 (56.70%), Query Frame = -2 Query: 198 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 488 +FGSGWAWL P+ + L V + N +PL+ +P+L +DVWEHAYYL +QNRRP+YI F ++V W V++R E A A Sbjct: 126 RFGSGWAWLTVT--------------PAGR---LRVDSSANQDSPLMEGNTPILGLDVWEHAYYLQYQNRRPEYIEAFY-RVVDWAEVARRYEIALA 204
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODF_PSEPU (Superoxide dismutase [Fe] OS=Pseudomonas putida GN=sodB PE=1 SV=3) HSP 1 Score: 71.633 bits (174), Expect = 3.274e-12 Identity = 39/92 (42.39%), Postives = 50/92 (54.35%), Query Frame = -2 Query: 210 FGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 485 FGSGW WLV K D SL + T A PL +PLLT DVWEHAYY+D++N RP Y+ F + LV+W V+++ E Sbjct: 119 FGSGWGWLVKKA-----------------DGSLALASTIGAGCPLTSGDTPLLTCDVWEHAYYIDYRNLRPKYVEAFWN-LVNWAFVAEQFE 192
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODF_PSEPK (Superoxide dismutase [Fe] OS=Pseudomonas putida (strain KT2440) GN=sodB PE=3 SV=3) HSP 1 Score: 71.633 bits (174), Expect = 3.274e-12 Identity = 39/92 (42.39%), Postives = 50/92 (54.35%), Query Frame = -2 Query: 210 FGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 485 FGSGW WLV K D SL + T A PL +PLLT DVWEHAYY+D++N RP Y+ F + LV+W V+++ E Sbjct: 119 FGSGWGWLVKKA-----------------DGSLALASTIGAGCPLTSGDTPLLTCDVWEHAYYIDYRNLRPKYVEAFWN-LVNWAFVAEQFE 192
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODF_BORPE (Superoxide dismutase [Fe] OS=Bordetella pertussis GN=sodB PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 3.274e-12 Identity = 39/89 (43.82%), Postives = 47/89 (52.81%), Query Frame = -2 Query: 219 FGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSK 485 FGSGW WLV K D +L +V T NA PL LLT DVWEHAYY+D++N RP Y+ F LV+WE +K Sbjct: 119 FGSGWTWLVKKA-----------------DGTLDIVNTSNAATPLTTADKALLTCDVWEHAYYIDYRNARPKYLENFW-ALVNWEFAAK 189
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_STRR6 (Superoxide dismutase [Mn] OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=sodA PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 5.585e-12 Identity = 37/97 (38.14%), Postives = 50/97 (51.55%), Query Frame = -2 Query: 201 TQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 491 T+FGSGWAWLV K+ L V T N P+ P+L +DVWEHAYY+ ++N RPDYI F +++W V + +AK Sbjct: 123 TRFGSGWAWLVVN-----------------KEGKLEVTSTANQDTPISEGKKPILGLDVWEHAYYVKYRNVRPDYIKAFF-SVINWNKVDELYAAAK 201
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODM_STRPN (Superoxide dismutase [Mn] OS=Streptococcus pneumoniae GN=sodA PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 5.585e-12 Identity = 37/97 (38.14%), Postives = 50/97 (51.55%), Query Frame = -2 Query: 201 TQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 491 T+FGSGWAWLV K+ L V T N P+ P+L +DVWEHAYY+ ++N RPDYI F +++W V + +AK Sbjct: 123 TRFGSGWAWLVVN-----------------KEGKLEVTSTANQDTPISEGKKPILGLDVWEHAYYVKYRNVRPDYIKAFF-SVINWNKVDELYAAAK 201
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODF_PSEHT (Superoxide dismutase [Fe] OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=sodB PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.294e-12 Identity = 38/86 (44.19%), Postives = 48/86 (55.81%), Query Frame = -2 Query: 231 FGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWD-YSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWE 485 FGS W WLV D SL +V T NA PL D +P+LT+D+WEHAYY+D++N RPDY+ F LV+WE Sbjct: 118 FGSSWTWLV-----------------KLADGSLDIVNTSNAATPLTDDGVTPILTVDLWEHAYYIDYRNVRPDYLKGFW-SLVNWE 185 The following BLAST results are available for this feature:
BLAST of CN181732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181732 ID=CN181732; Name=CN181732; organism=Citrus sinensis; type=EST; length=597bpback to top |