CN181731
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181731 vs. ExPASy Swiss-Prot
Match: PR1A_HORVU (Pathogenesis-related protein 1A/1B OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.235e-27 Identity = 71/200 (35.50%), Postives = 92/200 (46.00%), Query Frame = 2 Query: 98 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVFCP 694 F+I NNC T+W A +P GGG +L GQT +I GT+A RIWART C F+ G G C+TGDC G L C G P TLAE+ + + DF D+S IDGFN+ M+FS C+ D C +C P P Y +P D +T C +Y++ FCP Sbjct: 23 FNIKNNCGSTIWPAGIPVGGGFELGSGQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCSLSGQPPATLAEFTIGGGSTQDFYDISVIDGFNLAMDFS-----------CSTG------------------------DALQCRDPSCPP-----------PQAYQHPND--VATHACSGNNNYQITFCP 173
BLAST of CN181731 vs. ExPASy Swiss-Prot
Match: TLP_WHEAT (Thaumatin-like protein PWIR2 OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.930e-27 Identity = 72/200 (36.00%), Postives = 91/200 (45.50%), Query Frame = 2 Query: 98 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVFCP 694 F+I NNC T+W A +P GGG L GQT +I GT+A RIWART C F+ G G C+TGDC G L C G P TLAEY + + DF D+S IDGFN+ M+FS C+ D C +C P P Y +P D +T C +Y++ FCP Sbjct: 23 FNIKNNCGFTIWPAGIPVGGGFALGSGQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCSLSGRPPATLAEYTIGGGSTQDFYDISVIDGFNLAMDFS-----------CSTG------------------------DALQCRDPSCPP-----------PQAYQHPND--VATHACSGNNNYQITFCP 173
BLAST of CN181731 vs. ExPASy Swiss-Prot
Match: PRR3_JUNVI (Pathogenesis-related protein (Fragment) OS=Juniperus virginiana PE=1 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.523e-26 Identity = 53/83 (63.86%), Postives = 60/83 (72.29%), Query Frame = 2 Query: 95 KFDITNNCPDTVWAAAVPGGGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEY 343 KFDI N C TVWAA +PGGG++LD+GQTWT+ A GT +AR W RT C FDASGKG C+TGDC L C GA P TLAEY Sbjct: 21 KFDIKNQCGYTVWAAGLPGGGKRLDQGQTWTVNLAAGTASARFWGRTGCTFDASGKGSCQTGDCGRQLSCTVSGAVPATLAEY 103
BLAST of CN181731 vs. ExPASy Swiss-Prot
Match: RST4_AVESA (Thaumatin-like pathogenesis-related protein 4 OS=Avena sativa GN=RASTL-4 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.788e-26 Identity = 71/200 (35.50%), Postives = 96/200 (48.00%), Query Frame = 2 Query: 98 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVFCP 694 F ITNNC TVW AA+P GGG+QLD+GQTWT+ GT + RIW RT C F+ G G C+TGDC G L C G P TLAE+++ + D+ D+S ID +N+ M+FS C+ +C + CPD Y P D T +C + ++Y++ FCP Sbjct: 24 FTITNNCGYTVWPAAIPVGGGQQLDQGQTWTLNVPAGTNSGRIWGRTGCSFN-GGSGSCQTGDCAGALSCTLSG-QPATLAEFSIG--GEHDYYDISVIDVYNLAMDFS-----------CSTGDALQCRD-------------------------------------SSCPDAYHQPDD--PKTHSCNTNSNYQITFCP 169
BLAST of CN181731 vs. ExPASy Swiss-Prot
Match: RST1_AVESA (Thaumatin-like pathogenesis-related protein 1 OS=Avena sativa GN=RASTL-1 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.432e-24 Identity = 71/200 (35.50%), Postives = 91/200 (45.50%), Query Frame = 2 Query: 98 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVFCP 694 F ITNNC TVW A +P GGG QL+ Q+ I GT A RIW RT C F+ +G+G C TGDC G L C G P TLAEY + DF D+S IDGFN+ M+FS C+ + +C + CPD Y +P D +T C ++Y++ FCP Sbjct: 24 FRITNNCGFTVWPAGIPVGGGFQLNSKQSSNINVPAGTSAGRIWGRTGCSFN-NGRGSCATGDCAGALSCTLSG-QPATLAEYTIG--GSQDFYDISVIDGFNLAMDFS-----------CSTGVALKCRDA-------------------------------------NCPDAYHHPND--VATHACNGNSNYQITFCP 169
BLAST of CN181731 vs. ExPASy Swiss-Prot
Match: RST3_AVESA (Thaumatin-like pathogenesis-related protein 3 OS=Avena sativa GN=RASTL-3 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.418e-24 Identity = 74/200 (37.00%), Postives = 94/200 (47.00%), Query Frame = 2 Query: 98 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVFCP 694 F ITNNC TVW A +P GGG QL+ Q+ I GT A RIW RT C F+ +G+G C TGDC G L C G P TLAEY + DF D+S IDG+N+ M+FS C+ + LK C +SG CPD Y +P D +T C ++Y++ FCP Sbjct: 24 FRITNNCGFTVWPAGIPVGGGFQLNSKQSSNINVPAGTSAGRIWGRTGCSFN-NGRGSCATGDCAGALSCTLSG-QPATLAEYTIG--GSQDFYDISVIDGYNLAMDFS-----------CSTGV------ALK-----------------CRDSG--------------CPDAYHHPND--VATHACNGNSNYQITFCP 169
BLAST of CN181731 vs. ExPASy Swiss-Prot
Match: RST2_AVESA (Thaumatin-like pathogenesis-related protein 2 OS=Avena sativa GN=RASTL-2 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.418e-24 Identity = 70/200 (35.00%), Postives = 91/200 (45.50%), Query Frame = 2 Query: 98 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVFCP 694 F ITNNC TVW A +P GGG QL+ Q+ I GT A RIW RT C F+ +G+G C TGDC G L C G P TLAEY + DF D+S IDG+N+ M+FS C+ + +C + CPD Y +P D +T C ++Y++ FCP Sbjct: 24 FRITNNCGFTVWPAGIPVGGGFQLNSKQSSNINVPAGTSAGRIWGRTGCSFN-NGRGSCATGDCAGALSCTLSG-QPATLAEYTIG--GSQDFYDISVIDGYNLAMDFS-----------CSTGVALKCRDA-------------------------------------NCPDAYHHPND--VATHACNGNSNYQITFCP 169 The following BLAST results are available for this feature:
BLAST of CN181731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181731 ID=CN181731; Name=CN181731; organism=Citrus sinensis; type=EST; length=727bpback to top |