CN181730

Overview
NameCN181730
Unique NameCN181730
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length589
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: IAAT_MAIZE (Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 4.254e-65
Identity = 112/179 (62.57%), Postives = 134/179 (74.86%), Query Frame = -1
Query:   38 RGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPS-CNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCC---NSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVLGP 562
            RG++W ITA  GT AARIWART CQFDASG+G C TGDC G+++C GYG APNTLAEYALKQFN++DF D+S +DGFNVP  F     S C+R  +C  ++   CP EL+  G CN  CPVFK DEYCC    + NC PT +S++FK +CPD YSYPKDDATSTFTCP+GT+YKVV  P
Sbjct:   28 RGESWRITAPAGTTAARIWARTGCQFDASGRGSCRTGDCGGVVQCTGYGRAPNTLAEYALKQFNNLDFFDISILDGFNVPYSFLPDGGSGCSRGPRCAVDVNARCPAELRQDGVCNNACPVFKKDEYCCVGSAANNCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 206          
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: OS35_SOLCO (Osmotin-like protein OSML15 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 3.601e-64
Identity = 109/178 (61.24%), Postives = 129/178 (72.47%), Query Frame = -1
Query:   38 RGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRV--IKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPS-GTDYKVVLGP 562
            RGQ+W   A PGTK ARIW RT C FD +G+G C+TGDC G+LEC+G+G  PNTLAEYAL QF+++DF D+S IDGFN+PM F   +P   +   I+C ANI GECP  L+VPGGCN PC  F   +YCC  G CGPT  S+FFK RCPD YSYP+DD TSTFTC S  TDYKV+  P
Sbjct:   50 RGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKGWGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTNPGPGKCHPIQCVANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCQSWTTDYKVMFCP 227          
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: OLPA_TOBAC (Osmotin-like protein OS=Nicotiana tabacum GN=OLPA PE=1 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 6.143e-64
Identity = 109/178 (61.24%), Postives = 129/178 (72.47%), Query Frame = -1
Query:   38 RGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRV--IKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPS-GTDYKVVLGP 562
            RGQ+W   A PGTK ARIW RT C FD +G+G C+TGDC G+LEC+G+G  PNTLAEYAL QF+++DF D+S IDGFN+PM F    P   +   I+CTANI GECP  L+VPGGCN PC  F   +YCC  G CGPT  S++FK RCPD YSYP+DD TSTFTC S  TDYKV+  P
Sbjct:   50 RGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKGWGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCP 227          
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: PRR2_TOBAC (Pathogenesis-related protein R minor form OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 8.316e-64
Identity = 109/176 (61.93%), Postives = 131/176 (74.43%), Query Frame = -1
Query:   38 GQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNS--GNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVLGP 559
            GQ+W+I   PGT  ARIW RT C FD SG+G CETGDCNG+LECQGYG  PNTLAE+AL Q N  DF+D+S +DGFN+PMEFS  +  C R ++CTA I  +CP +LK  GGCN PC V KT+E+CC +  G+CGPT  S+FFK RCPD YSYP+DD  S FTCP GT+Y+VV  P
Sbjct:   53 GQSWSINVNPGTVQARIWGRTNCNFDGSGRGNCETGDCNGMLECQGYGKPPNTLAEFALNQPN-QDFVDISLVDGFNIPMEFSPTNGGC-RNLRCTAPINEQCPAQLKTQGGCNNPCTVIKTNEFCCTNGPGSCGPTDLSRFFKARCPDAYSYPQDDPPSLFTCPPGTNYRVVFCP 226          

HSP 2 Score: 22.7126 bits (47), Expect = 8.316e-64
Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = -3
Query:  552 PGGGRQLDKGSN 587
            PGGGRQL+ G +
Sbjct:   44 PGGGRQLNSGQS 55          
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: THM2_THADA (Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 8.890e-55
Identity = 96/175 (54.86%), Postives = 124/175 (70.86%), Query Frame = -1
Query:   38 GQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVP-GGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVLGP 559
            G++WTI   PGTK  +IWART C FD SG+G C TGDC GLL+C+ +G  P TLAE++L Q+   D+ID+SNI GFNVPM+FS  +  C R ++C A+I+G+CP +LK P GGCN  C VF+T EYCC +G CGPT +S+FFK  CPD +SY  D  T T TCP  ++Y+V   P
Sbjct:   56 GESWTINVEPGTKGGKIWARTDCYFDDSGRGICRTGDCGGLLQCKRFGRPPTTLAEFSLNQYG-KDYIDISNIKGFNVPMDFSPTTRGC-RGVRCAADIVGQCPAKLKAPGGGCNDACTVFQTSEYCCTTGKCGPTEYSRFFKRLCPDAFSYVLDKPT-TVTCPGSSNYRVTFCP 227          
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: THM1_THADA (Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.284e-53
Identity = 95/175 (54.29%), Postives = 121/175 (69.14%), Query Frame = -1
Query:   38 GQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVP-GGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVLGP 559
            G++WTI   PGT   +IWART C FD SG G C+TGDC GLL C+ +G  P TLAE++L Q+   D+ID+SNI GFNVPM FS  +  C R ++C A+I+G+CP +LK P GGCN  C VF+T EYCC +G CGPT +S+FFK  CPD +SY  D  T T TCP  ++Y+V   P
Sbjct:   34 GESWTINVEPGTNGGKIWARTDCYFDDSGSGICKTGDCGGLLRCKRFGRPPTTLAEFSLNQYG-KDYIDISNIKGFNVPMNFSPTTRGC-RGVRCAADIVGQCPAKLKAPGGGCNDACTVFQTSEYCCTTGKCGPTEYSRFFKRLCPDAFSYVLDKPT-TVTCPGSSNYRVTFCP 205          
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: PRR3_JUNAS (Pathogenesis-related protein OS=Juniperus ashei PE=1 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 2.296e-51
Identity = 95/178 (53.37%), Postives = 116/178 (65.17%), Query Frame = -1
Query:   38 RGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSG---NCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVLGP 562
            +GQTWT+  A GT +AR W RT C FDASGKG C+TGDC G L C   GA P TLAEY     +D D+ D+S +DGFN+P+  +  +  C     C A+I   CP+ELKV GGCN  C VFKTD+YCC +    NC  T +SK FK++CP  YSY KDD T+TF C SGTDY +V  P
Sbjct:   53 QGQTWTVNLAAGTASARFWGRTGCTFDASGKGSCQTGDCGGQLSCTVSGAVPATLAEYTQ---SDQDYYDVSLVDGFNIPLAINPTNAQCT-APACKADINAVCPSELKVDGGCNSACNVFKTDQYCCRNAYVDNCPATNYSKIFKNQCPQAYSYAKDD-TATFACASGTDYSIVFCP 225          

HSP 2 Score: 21.9422 bits (45), Expect = 2.296e-51
Identity = 7/10 (70.00%), Postives = 10/10 (100.00%), Query Frame = -3
Query:  558 PGGGRQLDKG 587
            PGGG++LD+G
Sbjct:   45 PGGGKRLDQG 54          
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: PR5_ARATH (Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.689e-35
Identity = 79/178 (44.38%), Postives = 99/178 (55.62%), Query Frame = -1
Query:   38 APGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEF--SSVSPSCNRVIKCTANILGECPNELKVPG-----GCNGPCPVFKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVLGP 535
            AP   + R WART C FDASG G+C TGDC G L C G G  P TLAE+ L      DF D+S +DG+NV +    S  S  C +   C +++   CP+ LKV        C   C  F TD+YCC   N     C PT +S+ FK+ CPD YSY  DD TSTFTC +G +Y++   P
Sbjct:   65 APAGWSGRFWARTGCNFDASGNGRCVTGDCGG-LRCNGGGVPPVTLAEFTLVGDGGKDFYDVSLVDGYNVKLGIRPSGGSGDC-KYAGCVSDLNAACPDMLKVMDQNNVVACKSACERFNTDQYCCRGANDKPETCPPTDYSRIFKNACPDAYSYAYDDETSTFTC-TGANYEITFCP 239          
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: TLP1_PYRPY (Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.381e-31
Identity = 73/176 (41.48%), Postives = 93/176 (52.84%), Query Frame = -1
Query:   38 AARIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFS--SVSPSCNRVIKCTANILGECPNELKVPG------GCNGPCPVFKTDEYCCNSG-----NCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVLGP 520
            + R W R+ C  D+SGK KC TGDC +G + C G GA+P  +L E  L      DF D+S +DGFN+P++ +    S  CN    C ANI   CP EL   G      GC   C      +YCC         C PT FSK FK++CP  YSY  DD +STFTC  G +Y++   P
Sbjct:   70 SGRFWGRSHCSIDSSGKFKCSTGDCGSGQISCNGAGASPPASLVELTLATNGGQDFYDVSLVDGFNLPIKLAPRGGSGDCNST-SCAANINTVCPAELSDKGSDGSVIGCKSACLALNQPQYCCTGAYGTPDTCPPTDFSKVFKNQCPQAYSYAYDDKSSTFTCFGGPNYEITFCP 244          
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: TP1B_MALDO (Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 4.443e-30
Identity = 72/183 (39.34%), Postives = 93/183 (50.82%), Query Frame = -1
Query:   38 APGTKAARIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN----RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVLGP 535
            AP   + R W RT+C  DA+GK  CET DC +G + C G GA P  TL E  +      D+ D+S +DGFN+PM   SV+P       +   C AN+   CP +L+V         C   C  F   +YCC   N     C PT +S+ F+ +CP  YSY  DD  STFTC  G DY +   P
Sbjct:   33 APSPWSGRFWGRTRCSTDAAGKFSCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPM---SVAPQGGTGECKPSSCPANVNMACPAQLQVKAADGSVISCKSACLAFGDSKYCCTPPNDTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 212          
The following BLAST results are available for this feature:
BLAST of CN181730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
IAAT_MAIZE4.254e-6562.57Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 S... [more]
OS35_SOLCO3.601e-6461.24Osmotin-like protein OSML15 OS=Solanum commersonii... [more]
OLPA_TOBAC6.143e-6461.24Osmotin-like protein OS=Nicotiana tabacum GN=OLPA ... [more]
PRR2_TOBAC8.316e-6461.93Pathogenesis-related protein R minor form OS=Nicot... [more]
THM2_THADA8.890e-5554.86Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1[more]
THM1_THADA1.284e-5354.29Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1[more]
PRR3_JUNAS2.296e-5153.37Pathogenesis-related protein OS=Juniperus ashei PE... [more]
PR5_ARATH2.689e-3544.38Pathogenesis-related protein 5 OS=Arabidopsis thal... [more]
TLP1_PYRPY1.381e-3141.48Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1... [more]
TP1B_MALDO4.443e-3039.34Thaumatin-like protein 1b (Fragment) OS=Malus dome... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001G08_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181730 ID=CN181730; Name=CN181730; organism=Citrus sinensis; type=EST; length=589bp
TTCTATTTCCATTTCTACCCCTGAAAAAAATGCTTCAGGGGCCCAATACA
ACCTTGTAGTCGGTCCCACTCGGGCAAGTAAATGTGCTGGTAGCGTCATC
CTTAGGGTAACTGTAAACATCCGGGCACCTATCCTTGAAAAACTTGGAGA
AACCTGTAGGTCCGCAGTTGCCTGAATTGCAACAGTACTCGTCGGTCTTG
AACACGGGGCACGGCCCGTTACATCCTCCAGGAACCTTCAATTCATTAGG
GCACTCGCCAAGAATGTTAGCAGTGCACTTGATCACGCGGTTGCATGAGG
GAGAGACAGAGCTAAATTCCATGGGAACATTGAATCCGTCAATGTTGGAC
ATGTCAATGAAATCCATGTCATTGAATTGCTTCAACGCGTACTCGGCCAA
GGTGTTAGGTGCTGCACCGTAGCCTTGGCACTCGAGGAGTCCGTTACAGT
CACCGGTCTCGCATTTGCCTTTGCCGGAAGCATCAAACTGGCATTTGGTT
CGAGCCCAAATGCGGGCTGCTTTTGTGCCTGGCGCGGCGGTGATGGTCCA
TGTTTGACCCCTTGTCGAGTTGCCTGCCGCCTCCGGGCA
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