CN181730

Overview
NameCN181730
Unique NameCN181730
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length589
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: TLP_PRUAV (Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 9.898e-30
Identity = 73/176 (41.48%), Postives = 91/176 (51.70%), Query Frame = -1
Query:   38 RIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN----RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVLGP 514
            R WART C  DASGK  C T DC +G + C G GA P  TLAE+ +      DF D+S +DGFN+PM   SV+P       +   C AN+   CP+EL+  G       C   C  F T +YCC         C PT +S+ F + CPD YSY  DD   TFTC  G +Y +   P
Sbjct:   73 RFWARTGCSTDASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPM---SVTPQGGTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLSACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP 245          
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: TP1A_MALDO (Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.293e-29
Identity = 72/183 (39.34%), Postives = 92/183 (50.27%), Query Frame = -1
Query:   38 APGTKAARIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN----RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVLGP 535
            AP   + R W RT+C  DA+GK  CET DC +G + C G GA P  TL E  +      D+ D+S +DGFN+PM   SV+P       +   C AN+   CP  L+V         C   C  F   +YCC   N     C PT +S+ F+ +CP  YSY  DD  STFTC  G DY +   P
Sbjct:   67 APSPWSGRFWGRTRCSTDAAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPM---SVAPQGGTGECKPSSCPANVNKVCPAPLQVKAADGSVISCKSACLAFGDSKYCCTPPNNTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 246          
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: TLP2_PRUPE (Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 4.912e-29
Identity = 72/178 (40.45%), Postives = 93/178 (52.25%), Query Frame = -1
Query:   38 AARIWARTKCQFDASGKGKCETGDCN-GLLECQGY-GAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN----RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCN-----SGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVLGP 520
            + R WART+C  DASGK  CET DC+ G L C G  G  P TLAE+ +      DF D+S +DGFN+PM   SV+P       ++  C AN+   CP+EL+  G       C   C  F   +YCC         C PT +S+ F ++CPD YSY  DD    FTC  G +Y +   P
Sbjct:   68 SGRFWARTRCSTDASGKFVCETADCDSGQLMCNGKTGIPPATLAEFTIAAGGGQDFYDVSLVDGFNLPM---SVTPQGGTGTCKMGSCAANVNLVCPSELQKIGSDGSVVACLSACVKFGEPQYCCTPPQETKEKCPPTNYSQIFHEQCPDAYSYAFDDNKGLFTCSGGPNYLITFCP 242          
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: TLP1_PRUPE (Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.184e-28
Identity = 73/183 (39.89%), Postives = 91/183 (49.73%), Query Frame = -1
Query:   38 APGTKAARIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN----RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVLGP 535
            AP   + R + RT+C  DASGK  C T DC +G + C G GAAP  TL E  +      DF D+S +DGFN+PM   SV+P       +   C A+I   CP  L+V G       C   C  F   +YCC   N     C P  +SK FK +CP  YSY  DD +STFTC     Y +   P
Sbjct:   67 APSPWSGRFFGRTRCSTDASGKFTCATADCGSGQVSCNGNGAAPPATLVEITIASNGGQDFYDVSLVDGFNLPM---SVAPQGGTGKCKASTCPADINKVCPAPLQVKGSDGSVIACKSACLAFNQPKYCCTPPNDKPETCPPPDYSKLFKTQCPQAYSYAYDDKSSTFTCSGRPAYLITFCP 246          
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: TLP1_CASSA (Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.159e-28
Identity = 67/173 (38.73%), Postives = 91/173 (52.60%), Query Frame = -1
Query:   38 RIWARTKCQFDASGKGKCETGDCN-GLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN-RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCNSG-----NCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVLGP 514
            R WART+C  + SGK  CET DC+ G + C G GA P  +L E  +     MDF D+S +DG+N+P+  ++   + + +   C AN+   CP EL+V G       C   C  F   +YCC         C  T +S+ FK +CP  YSY  DD+TSTFTC    DY +   P
Sbjct:   72 RFWARTRCTTN-SGKFTCETADCSTGQVACNGNGAIPPASLVEINIAANRGMDFYDVSLVDGYNLPVSVATRGGTGDCKATSCRANVNAVCPAELQVKGSDASVLACKSACTAFNQPQYCCTGAFDTARTCPATKYSRIFKQQCPQAYSYAYDDSTSTFTCSGAPDYVITFCP 243          
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: TLPH_ARATH (Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 2.980e-26
Identity = 71/180 (39.44%), Postives = 89/180 (49.44%), Query Frame = -1
Query:   38 PGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGA-APNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSV--SPSCNRVIKCTANILGECPNELKVPG-------GCNGPCPVFKTDEYCC-----NSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVLGP 532
            P   + R W R  C FD SG+G C TGDC G L C G G   P TLAE  L    ++DF D+S +DG+N+ M    V  S  C+    C +++   CP  L+V          C   C  F + +YCC     N  +C PT +SK FK  CP  YSY  DD TS  TC S  +Y V   P
Sbjct:   64 PPLWSGRFWGRHGCTFDRSGRGHCATGDCGGSLSCNGAGGEPPATLAEITLGP--ELDFYDVSLVDGYNLAMSIMPVKGSGQCS-YAGCVSDLNQMCPVGLQVRSRNGKRVVACKSACSAFNSPQYCCTGLFGNPQSCKPTAYSKIFKVACPKAYSYAYDDPTSIATC-SKANYIVTFCP 239          
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: OLP1_SOLLC (Osmotin-like protein OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.133e-25
Identity = 66/177 (37.29%), Postives = 93/177 (52.54%), Query Frame = -1
Query:   47 AARIWARTKCQFDASGKGKCETGDCNGLLECQGYG-AAPNTLAEYALKQFN-DMDFIDMSNIDGFNVPMEFSSVSPSCNR----VIKCTANILGECPNELKVPG--------GCNGPCPVFKTDEYCCNSG-----NCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVV 520
            + RIWART C +   GK  C TGDC G +EC G G AAP TLA++ L   + D     +S +DGFN+P+   +V+P   +    V+ C AN+L  CP  L+           GC   C  FK+DE+CC +       C P+ +S+FFK  CP  ++Y  D  +    C S  + KV+
Sbjct:   77 SGRIWARTGCNYQ-HGKFYCATGDCGGRIECDGLGGAAPATLAQFVLHHGHADFSTYGVSLVDGFNIPL---TVTPHEGKGVCPVVGCRANLLESCPAVLQFRSHGGHGPVVGCKSACEAFKSDEFCCRNHYNSPQTCKPSSYSQFFKHACPATFTYAHDSPSLMHECSSPRELKVI 249          
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: TLPH_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.303e-25
Identity = 65/167 (38.92%), Postives = 82/167 (49.10%), Query Frame = -1
Query:   74 PGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQG-YGAAPNTLAEYAL-KQFNDMDFIDMSNIDGFNVPMEFSSVSPSCN-RVIKCTANILGECPNELKV------PGGCNGPCPVFKTDEYCC-----NSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTC 532
            P   + R+W R  C FD+ G+G C TGDC G+L C G  GA P T+ E  L    + M F D+S +DGFN P+  ++V          C A++   CP+ L+V        GC   C     D YCC     +   C PT FS  FK  CP  YSY  DDATS   C
Sbjct:   72 PAGWSGRVWPRRGCSFDSRGRGSCATGDCGGVLRCNGAAGATPATVVEMTLGTSASAMHFYDVSLVDGFNAPVSMAAVGGGVGCGTAACGADVNVCCPSALEVRDREGRVAGCRSACRAMGGDRYCCTGDYASPSACRPTIFSHLFKAICPRAYSYAYDDATSLNRC 238          
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: TLP_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os12g0628600 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.816e-22
Identity = 60/174 (34.48%), Postives = 77/174 (44.25%), Query Frame = -1
Query:   38 GQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVLGP 559
            GQTWTI    GT + R+W RT C FD SG+G C TGDC G L C   G  P TLAE+ +      DF D+S IDG+NV M FS           C++ +   C +                                      RCPD Y +P+D+ T T  C   ++Y+VV  P
Sbjct:   55 GQTWTINVPAGTSSGRVWGRTGCSFDGSGRGSCATGDCAGALSCTLSGQKPLTLAEFTIG--GSQDFYDLSVIDGYNVAMSFS-----------CSSGVTVTCRD-------------------------------------SRCPDAYLFPEDN-TKTHACSGNSNYQVVFCP 177          
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: TLP_WHEAT (Thaumatin-like protein PWIR2 OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.135e-17
Identity = 44/83 (53.01%), Postives = 53/83 (63.86%), Query Frame = -1
Query:  311 GQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFS 559
            GQT +I    GT+A RIWART C F+  G G C+TGDC G L C   G  P TLAEY +   +  DF D+S IDGFN+ M+FS
Sbjct:   49 GQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCSLSGRPPATLAEYTIGGGSTQDFYDISVIDGFNLAMDFS 130          
The following BLAST results are available for this feature:
BLAST of CN181730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
TLP_PRUAV9.898e-3041.48Glucan endo-1,3-beta-glucosidase OS=Prunus avium P... [more]
TP1A_MALDO1.293e-2939.34Thaumatin-like protein 1a OS=Malus domestica GN=TL... [more]
TLP2_PRUPE4.912e-2940.45Thaumatin-like protein 2 OS=Prunus persica PE=2 SV... [more]
TLP1_PRUPE3.184e-2839.89Thaumatin-like protein 1 OS=Prunus persica PE=2 SV... [more]
TLP1_CASSA4.159e-2838.73Thaumatin-like protein 1 OS=Castanea sativa GN=TL1... [more]
TLPH_ARATH2.980e-2639.44Thaumatin-like protein OS=Arabidopsis thaliana GN=... [more]
OLP1_SOLLC1.133e-2537.29Osmotin-like protein OS=Solanum lycopersicum PE=1 ... [more]
TLPH_ORYSJ4.303e-2538.92Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
TLP_ORYSJ5.816e-2234.48Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
TLP_WHEAT1.135e-1753.01Thaumatin-like protein PWIR2 OS=Triticum aestivum ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001G08_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181730 ID=CN181730; Name=CN181730; organism=Citrus sinensis; type=EST; length=589bp
TTCTATTTCCATTTCTACCCCTGAAAAAAATGCTTCAGGGGCCCAATACA
ACCTTGTAGTCGGTCCCACTCGGGCAAGTAAATGTGCTGGTAGCGTCATC
CTTAGGGTAACTGTAAACATCCGGGCACCTATCCTTGAAAAACTTGGAGA
AACCTGTAGGTCCGCAGTTGCCTGAATTGCAACAGTACTCGTCGGTCTTG
AACACGGGGCACGGCCCGTTACATCCTCCAGGAACCTTCAATTCATTAGG
GCACTCGCCAAGAATGTTAGCAGTGCACTTGATCACGCGGTTGCATGAGG
GAGAGACAGAGCTAAATTCCATGGGAACATTGAATCCGTCAATGTTGGAC
ATGTCAATGAAATCCATGTCATTGAATTGCTTCAACGCGTACTCGGCCAA
GGTGTTAGGTGCTGCACCGTAGCCTTGGCACTCGAGGAGTCCGTTACAGT
CACCGGTCTCGCATTTGCCTTTGCCGGAAGCATCAAACTGGCATTTGGTT
CGAGCCCAAATGCGGGCTGCTTTTGTGCCTGGCGCGGCGGTGATGGTCCA
TGTTTGACCCCTTGTCGAGTTGCCTGCCGCCTCCGGGCA
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