CN181730
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: PR1C_HORVU (Pathogenesis-related protein 1C OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.303e-17 Identity = 43/83 (51.81%), Postives = 53/83 (63.86%), Query Frame = -1 Query: 311 GQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFS 559 GQT +I GT+A RIWART C F+ G G C+TGDC G L C G P TLAE+ + + DF D+S IDGFN+ M+FS Sbjct: 49 GQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCSLSGRPPATLAEFTIGGGSTQDFYDISVIDGFNLAMDFS 130
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: PR1A_HORVU (Pathogenesis-related protein 1A/1B OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.303e-17 Identity = 43/83 (51.81%), Postives = 53/83 (63.86%), Query Frame = -1 Query: 311 GQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFS 559 GQT +I GT+A RIWART C F+ G G C+TGDC G L C G P TLAE+ + + DF D+S IDGFN+ M+FS Sbjct: 49 GQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCSLSGQPPATLAEFTIGGGSTQDFYDISVIDGFNLAMDFS 130
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: PRR3_JUNVI (Pathogenesis-related protein (Fragment) OS=Juniperus virginiana PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 6.676e-16 Identity = 36/58 (62.07%), Postives = 40/58 (68.97%), Query Frame = -1 Query: 389 RGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEY 562 +GQTWT+ A GT +AR W RT C FDASGKG C+TGDC L C GA P TLAEY Sbjct: 46 QGQTWTVNLAAGTASARFWGRTGCTFDASGKGSCQTGDCGRQLSCTVSGAVPATLAEY 103 HSP 2 Score: 21.9422 bits (45), Expect = 6.676e-16 Identity = 7/10 (70.00%), Postives = 10/10 (100.00%), Query Frame = -3 Query: 558 PGGGRQLDKG 587 PGGG++LD+G Sbjct: 38 PGGGKRLDQG 47
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: RST4_AVESA (Thaumatin-like pathogenesis-related protein 4 OS=Avena sativa GN=RASTL-4 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.489e-14 Identity = 44/111 (39.64%), Postives = 62/111 (55.86%), Query Frame = -1 Query: 230 RGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVP 562 +GQTWT+ GT + RIW RT C F+ G G C+TGDC G L C G P TLAE+++ + D+ D+S ID +N+ M+FS S ++C + CP+ P Sbjct: 49 QGQTWTLNVPAGTNSGRIWGRTGCSFN-GGSGSCQTGDCAGALSCTLSG-QPATLAEFSIG--GEHDYYDISVIDVYNLAMDFSC---STGDALQCRDS---SCPDAYHQP 149 HSP 2 Score: 20.4014 bits (41), Expect = 2.489e-14 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = -3 Query: 558 GGGRQLDKG 584 GGG+QLD+G Sbjct: 42 GGGQQLDQG 50
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: RST1_AVESA (Thaumatin-like pathogenesis-related protein 1 OS=Avena sativa GN=RASTL-1 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.418e-14 Identity = 50/119 (42.02%), Postives = 60/119 (50.42%), Query Frame = -1 Query: 215 QTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPG-----GCNG 556 Q+ I GT A RIW RT C F+ +G+G C TGDC G L C G P TLAEY + DF D+S IDGFN+ M+FS S +KC CP+ P CNG Sbjct: 51 QSSNINVPAGTSAGRIWGRTGCSFN-NGRGSCATGDCAGALSCTLSG-QPATLAEYTIG--GSQDFYDISVIDGFNLAMDFSC---STGVALKCRD---ANCPDAYHHPNDVATHACNG 159
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: RST2_AVESA (Thaumatin-like pathogenesis-related protein 2 OS=Avena sativa GN=RASTL-2 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 7.614e-14 Identity = 49/119 (41.18%), Postives = 60/119 (50.42%), Query Frame = -1 Query: 215 QTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPG-----GCNG 556 Q+ I GT A RIW RT C F+ +G+G C TGDC G L C G P TLAEY + DF D+S IDG+N+ M+FS S +KC CP+ P CNG Sbjct: 51 QSSNINVPAGTSAGRIWGRTGCSFN-NGRGSCATGDCAGALSCTLSG-QPATLAEYTIG--GSQDFYDISVIDGYNLAMDFSC---STGVALKCRD---ANCPDAYHHPNDVATHACNG 159
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: RST3_AVESA (Thaumatin-like pathogenesis-related protein 3 OS=Avena sativa GN=RASTL-3 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 9.944e-14 Identity = 49/119 (41.18%), Postives = 61/119 (51.26%), Query Frame = -1 Query: 215 QTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPG-----GCNG 556 Q+ I GT A RIW RT C F+ +G+G C TGDC G L C G P TLAEY + DF D+S IDG+N+ M+FS S +KC + CP+ P CNG Sbjct: 51 QSSNINVPAGTSAGRIWGRTGCSFN-NGRGSCATGDCAGALSCTLSG-QPATLAEYTIG--GSQDFYDISVIDGYNLAMDFSC---STGVALKCRDS---GCPDAYHHPNDVATHACNG 159 The following BLAST results are available for this feature:
BLAST of CN181730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181730 ID=CN181730; Name=CN181730; organism=Citrus sinensis; type=EST; length=589bpback to top |