CN181711

Overview
NameCN181711
Unique NameCN181711
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181711 vs. ExPASy Swiss-Prot
Match: NACA_CAEBR (Nascent polypeptide-associated complex subunit alpha OS=Caenorhabditis briggsae GN=CBG05114 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.129e-21
Identity = 60/135 (44.44%), Postives = 82/135 (60.74%), Query Frame = -2
Query:  199 KLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXQFRMPDMGSVMAKPDXXXXXXXXXXXXXXXXXXXXXXEPRDIDLVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 603
            KLG+K VTGVSRV I+++KNILF I+KPDVFKSP S+TY+IFGEAKIED             +M  + ++    +                      E +DI+LV++QA  +R+KA++ALK  + DIV+AIM LT
Sbjct:   70 KLGLKQVTGVSRVCIRKSKNILFVINKPDVFKSPGSDTYIIFGEAKIEDLTQHA--------QMSAIENMKPTREAPQLKTVEEDDNEDVEEDSTGIEEKDIELVISQANTTRNKAIRALKDADNDIVNAIMSLT 196          
BLAST of CN181711 vs. ExPASy Swiss-Prot
Match: NACP1_HUMAN (Putative nascent polypeptide-associated complex subunit alpha-like protein OS=Homo sapiens GN=NACAP1 PE=5 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.780e-21
Identity = 62/138 (44.93%), Postives = 85/138 (61.59%), Query Frame = -2
Query:  199 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXQFRMPDMGSVMAKPDXXXXXXXXXXXXXXXXXXXXXXEPRDIDLVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 612
            A  KLG++ VTGV+RVTI+++KNILF I+KPDV+KSP S+TY++FGEAKIED           +F++   G  ++                         E +DI+LV++QA V  +KAV+ALK  N DIV+AIMELT
Sbjct:   78 ARFKLGLQQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYMVFGEAKIEDLSQEAQLAAAEKFKV--QGEAVSNIQENTQTPTVQEGSEDEEVDETGVEIKDIELVLSQANVWGAKAVRALKNSN-DIVNAIMELT 212          
BLAST of CN181711 vs. ExPASy Swiss-Prot
Match: NACA_CAEEL (Nascent polypeptide-associated complex subunit alpha OS=Caenorhabditis elegans GN=Y65B4BR.5 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.056e-20
Identity = 61/135 (45.19%), Postives = 80/135 (59.26%), Query Frame = -2
Query:  199 KLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXQFRMPDMGSVMAKPDXXXXXXXXXXXXXXXXXXXXXXEPRDIDLVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 603
            KLG+K VTGVSRV I+++KNILF I+KPDVFKSP S+TY+IFGEAKIED             + P   +   K                        E +DI+LV++QA  +R+KA++ALK  + DIV+AIM LT
Sbjct:   68 KLGLKQVTGVSRVCIRKSKNILFVINKPDVFKSPGSDTYIIFGEAKIEDLTQHAQMSAIENLK-PTREAPQLK-----TVEEDENEDVEFKEDSTGIEEKDIELVISQANTTRNKAIRALKEADNDIVNAIMSLT 196          
BLAST of CN181711 vs. ExPASy Swiss-Prot
Match: NACA_EMENI (Nascent polypeptide-associated complex subunit alpha OS=Emericella nidulans GN=egd2 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.944e-20
Identity = 61/148 (41.22%), Postives = 82/148 (55.41%), Query Frame = -2
Query:  199 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXQFRMPDMGSVMAKPD----------XXXXXXXXXXXXXXXXXXXXXXEPRDIDLVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 612
            A+ KLG+K V G++RVT++R KNILF I++PDV++SP+S T++IFGEAKIED           Q    +     A  D                                EP+DIDLVM QA VSR KAVKAL+ ++ DIV++IM L+
Sbjct:   55 AIGKLGLKHVPGITRVTLRRPKNILFVINQPDVYRSPSSNTWIIFGEAKIEDLNSQAQASAAQQLAAAEAAGEHAGHDHDHDKGKGKAPETEAKKEEEEDDGEEVDETGLEPKDIDLVMAQANVSRKKAVKALRENDNDIVNSIMALS 202          
BLAST of CN181711 vs. ExPASy Swiss-Prot
Match: NACA_NEUCR (Nascent polypeptide-associated complex subunit alpha OS=Neurospora crassa GN=egd-2 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.797e-19
Identity = 58/142 (40.85%), Postives = 80/142 (56.34%), Query Frame = -2
Query:  199 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXQFRMP----DMGSVMAKPDXXXXXXXXXXXXXXXXXXXXXXEPRDIDLVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 612
            A+ KL ++ V G++RVT++R KNILF I+ P+V+KSPNS TY++FGEAKIED           Q        D      + +                      E +DI+LVMTQA VSR KA+KALK ++ DIV++IM L+
Sbjct:   58 AIEKLHLQRVPGITRVTLRRPKNILFVINNPEVYKSPNSNTYIVFGEAKIEDLNASAQAAAAQQLASQSAEHDHAGHTHEHEEAGKAKEEEEEDEGEEVDAEGIEDKDIELVMTQANVSRKKAIKALKENDNDIVNSIMALS 199          
BLAST of CN181711 vs. ExPASy Swiss-Prot
Match: NACA_COCIM (Nascent polypeptide-associated complex subunit alpha OS=Coccidioides immitis GN=EGD2 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.797e-19
Identity = 59/148 (39.86%), Postives = 82/148 (55.41%), Query Frame = -2
Query:  199 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXQFRMPDMGS----------VMAKPDXXXXXXXXXXXXXXXXXXXXXXEPRDIDLVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 612
            A+ KLG+K V G++RVT++R KNILF I++PDV++SP+S T++IFGEAKIED           Q    +              + K                        E +DI+LVM QA VSRSKA+KALK ++ DIV++IM L+
Sbjct:   57 AIGKLGLKHVPGITRVTLRRPKNILFVINQPDVYRSPSSNTWIIFGEAKIEDLNSQAQASAAQQLSAAEAAGNGEHAGHEHIDLGKGKAPETEKKEEEEEEEGEVDETGLEAKDIELVMAQANVSRSKAIKALKENDNDIVNSIMALS 204          
BLAST of CN181711 vs. ExPASy Swiss-Prot
Match: NACA_MAGGR (Nascent polypeptide-associated complex subunit alpha OS=Magnaporthe grisea GN=EGD2 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.888e-19
Identity = 59/144 (40.97%), Postives = 80/144 (55.56%), Query Frame = -2
Query:  199 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXQFRM------PDMGSVMAKPDXXXXXXXXXXXXXXXXXXXXXXEPRDIDLVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 612
            A+ KL +  V G++RVT++R KNILF I+ P+V+KSPNS TY++FGEAKIED           Q            G    +                        E +DI+LVMTQAGVSR+KA+KALK ++ DIV++IM L+
Sbjct:   57 AIEKLHLIRVDGITRVTLRRPKNILFVINNPEVYKSPNSGTYIVFGEAKIEDLNASAQAAAAQQLASSAGHDHDHAGHSHGEAKASEGDAKKEEEDDDEEVDADGIEDKDIELVMTQAGVSRTKAIKALKENDNDIVNSIMALS 200          
BLAST of CN181711 vs. ExPASy Swiss-Prot
Match: NACA_PHANO (Nascent polypeptide-associated complex subunit alpha OS=Phaeosphaeria nodorum GN=EGD2 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.687e-18
Identity = 62/156 (39.74%), Postives = 83/156 (53.21%), Query Frame = -2
Query:  199 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXQFRMPDMGS------------------VMAKPDXXXXXXXXXXXXXXXXXXXXXXEPRDIDLVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 612
            A+ KLG+K + G++RVT++R KNILF I++PDV+KSP+S T++IFGEAKIED           Q    +  S                  V  K D                      E +DI+LVM QA VSR KAVKALK ++ DIV++IM L+
Sbjct:   57 AIAKLGLKHIDGITRVTLRRPKNILFVINQPDVYKSPSSNTWIIFGEAKIEDLNSQAQASAAQQLAQAEAASHDHSGHDHDHDHKGKGKAVEDKKD--DEEDEEEEEEDDEEVDDSGLEAKDIELVMQQASVSRKKAVKALKENDNDIVNSIMALS 210          
BLAST of CN181711 vs. ExPASy Swiss-Prot
Match: NACA_ASPTN (Nascent polypeptide-associated complex subunit alpha OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=egd2 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.203e-18
Identity = 57/147 (38.78%), Postives = 81/147 (55.10%), Query Frame = -2
Query:  199 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXQFRMPDMG---------SVMAKPDXXXXXXXXXXXXXXXXXXXXXXEPRDIDLVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 612
            A+ KLG+K V G++RVT +R KNILF I++P+V++SP+S T++IFGEAKIED           Q    +            ++ K                        E +DI+LVM QA VSR KAVKAL+ ++ DIV++IM L+
Sbjct:   55 AIGKLGLKLVPGITRVTFRRPKNILFVINQPEVYRSPSSNTWIIFGEAKIEDLNAQAQASAAQQLAAQEAAQEHAGHEHEDILGKAKEPEAEKKEAEEDDGEEVDESGLEAKDIELVMAQANVSRKKAVKALRENDNDIVNSIMALS 201          
BLAST of CN181711 vs. ExPASy Swiss-Prot
Match: NACA_CHAGB (Nascent polypeptide-associated complex subunit alpha OS=Chaetomium globosum GN=EGD2 PE=3 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.908e-18
Identity = 58/142 (40.85%), Postives = 77/142 (54.23%), Query Frame = -2
Query:  199 AMLKLGMKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXXXXQFRMP----DMGSVMAKPDXXXXXXXXXXXXXXXXXXXXXXEPRDIDLVMTQAGVSRSKAVKALKTHNGDIVSAIMELT 612
            A+ KL +  V G++RVT++R KNILF I+ P+V+KSPNS TY++FGEAKIED           Q        D                               E +DI+LVMTQA VSR KA+KALK ++ DIV++IM L+
Sbjct:   58 AIEKLHLTRVPGITRVTLRRPKNILFVINNPEVYKSPNSNTYIVFGEAKIEDLNASAQAAAAQQLANQTAEHDHAGHTHDHKHEAAKEEEEEEDDGEEVDAEGIEDKDIELVMTQANVSRKKAIKALKENDNDIVNSIMALS 199          
The following BLAST results are available for this feature:
BLAST of CN181711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
NACA_CAEBR2.129e-2144.44Nascent polypeptide-associated complex subunit alp... [more]
NACP1_HUMAN2.780e-2144.93Putative nascent polypeptide-associated complex su... [more]
NACA_CAEEL1.056e-2045.19Nascent polypeptide-associated complex subunit alp... [more]
NACA_EMENI8.944e-2041.22Nascent polypeptide-associated complex subunit alp... [more]
NACA_NEUCR5.797e-1940.85Nascent polypeptide-associated complex subunit alp... [more]
NACA_COCIM5.797e-1939.86Nascent polypeptide-associated complex subunit alp... [more]
NACA_MAGGR9.888e-1940.97Nascent polypeptide-associated complex subunit alp... [more]
NACA_PHANO1.687e-1839.74Nascent polypeptide-associated complex subunit alp... [more]
NACA_ASPTN2.203e-1838.78Nascent polypeptide-associated complex subunit alp... [more]
NACA_CHAGB4.908e-1840.85Nascent polypeptide-associated complex subunit alp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001F22_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001F22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181711 ID=CN181711; Name=CN181711; organism=Citrus sinensis; type=EST; length=772bp
GGCCCTTGGAGGAAGATACTACTAACCATTAAAACAACTAGCGAGGAGGA
TTCTCATCCCCACTGCAAAAGAAATTGTATCTGCAACAGAAATTGCATTA
AGTGCACAAAAATAGAGTAGTAATTCAGTCATCTCACCGACTACAATAAC
TAAATTCATCGACAGAAAAATACTGCATGGAAGCAAATCTACTCAAGTAG
TAAGCTCCATGATAGCACTAACAATGTCTCCATTATGTGTCTTCAGAGCT
TTGACAGCCTTGCTTCTTGAGACACCGGCCTGTGTCATGACCAAATCAAT
GTCCCGAGGCTCAACTGCCGTCTCATCAACTTCCTCCTCTTCCTCATCTT
GTTGTGCACCAGCAGCAGCAGAAGAGGCATCTGGTTTCGCCATCACCGAT
CCCATGTCAGGCATCCTGAACTGCTGGGCAGCCTGTGTCTGCAGCTGGGA
GCTCAAATCCTCTATTTTGGCTTCCCCAAATATGACGTACGTTTCAGAAT
TTGGGCTCTTGAAAACATCAGGCTTTGAGATGAAAAATAGTATATTTTTG
GTTCTCTTGATGGTTACCCTGCTAACTCCTGTTACAGGTTTCATGCCCAA
CTTCAGCATTGCCTTGCGGCTCTTTTTCTCACTTCTGCTCTGCTTTGAAC
TCCCTCCTTGAGCTCCATCGTCTTTGTTGTCATCGTCGTCCTCGTCATCA
TCGTCATTGTCGTGGTCATCATCTTCTTCCTCATCGTCCTTAACATCTTC
AACTACAGGCTCATCCTCATCC
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