CN181702

Overview
NameCN181702
Unique NameCN181702
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length673
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181702 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.675e-24
Identity = 65/193 (33.68%), Postives = 103/193 (53.37%), Query Frame = 3
Query:  108 KVKQAVALLILRQCLLANIAGLSHGALQVGFYRGKCGIADVEMIVAGVVTARFIRDPTVVAALIRLQFHDCFVNGCDASILIDAT---NSEKTAIPNLTIRG--YDIIDEAKAAVERFCPGVVSCADLIAIAARDAVFLGGGGRYEVQTGRRDGLVSLAQNVXXXXXXXXXXXXQTMAVFANKGLNLTDMVLL 671
            ++K    +L+L      +++  +   L V FY   C       I+   +T + I  PT  AA +RL FHDCF NGCDAS+L+ +T    +E+ +  NL++ G  +D++  AK A+E  CP  VSC+D+IA+A RD +   GG  YE+  GRRD   S +  V            + +  F+++G ++ +MV L
Sbjct:    6 QLKNLTIILLLLCLSFQSLSFAAESHLTVDFYSKSC--PKFLDIIRETITNKQISTPTTAAAALRLFFHDCFPNGCDASVLVSSTAFNTAERDSSINLSLPGDGFDVVIRAKTALELACPNTVSCSDIIAVAVRDLLVTVGGPYYEISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQEMVAL 196          
BLAST of CN181702 vs. ExPASy Swiss-Prot
Match: PER45_ARATH (Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.675e-24
Identity = 71/185 (38.38%), Postives = 101/185 (54.59%), Query Frame = 3
Query:  129 LLILRQCLLANIAGLSHGALQVGFYRGKCGIADVEMIVAGVVTARFIRDPTVVAALIRLQFHDCFVNGCDASILIDATNSEKTAIPNLTIRG--YDIIDEAKAAVERF--CPGVVSCADLIAIAARDAVFLGGGGRYEVQTGRRDGLVSLAQNVXXXXXXXXXXXXQTMAVFANKGLNLTDMVLL 671
            LL+L  C+ A         L+ GFY+  C   +VE IV   V  +F +      A +RL FHDCFV GCDASI+I A+ SE+    ++++ G  +D + +AK AV+    C   VSCAD++A+A R+ V L GG  Y V+ GRRDG +S   +V            Q   +F+  GL+ TDM+ L
Sbjct:   16 LLLLSSCVSAQ--------LRTGFYQNSC--PNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASIMI-ASPSERDHPDDMSLAGDGFDTVVKAKQAVDSNPNCRNKVSCADILALATREVVVLTGGPSYPVELGRRDGRISTKASVQSQLPQPEFNLNQLNGMFSRHGLSQTDMIAL 189          
BLAST of CN181702 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 7.975e-24
Identity = 69/189 (36.51%), Postives = 101/189 (53.44%), Query Frame = 3
Query:  129 LLILRQCLLANI-AGLSHGALQVGFYRGKCGIADVEMIVAGVVTARFIRDPTVVAALIRLQFHDCFVNGCDASILIDAT---NSEKTAIPNLTIRG--YDIIDEAKAAVER--FCPGVVSCADLIAIAARDAVFLGGGGRYEVQTGRRDGLVSLAQNVXXXXXXXXXXXXQTMAVFANKGLNLTDMVLL 671
            +L++  CL+ ++    +   L  GFY   C   +VE IV   V  +  +    V A +RL FHDCFVNGCDAS++I +T    +EK    N+++ G  +D++ +AK A++    C   VSCAD++ +A RD V   GG  YEV+ GR DGLVS A +V            +  A+F    L   DM+ L
Sbjct:    7 VLLIGLCLIISVFPDTTTAQLSRGFYSKTC--PNVEQIVRNAVQKKIKKTFVAVPATLRLFFHDCFVNGCDASVMIQSTPKNKAEKDHPDNISLAGDGFDVVIQAKKALDSNPSCRNKVSCADILTLATRDVVVAAGGPSYEVELGRFDGLVSTASSVEGNLPGPSDNVDKLNALFTKNKLTQEDMIAL 193          
BLAST of CN181702 vs. ExPASy Swiss-Prot
Match: PER41_ARATH (Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.042e-23
Identity = 67/164 (40.85%), Postives = 90/164 (54.88%), Query Frame = 3
Query:  198 FYRGKCGIADVEMIVAGVVTARFIRDPTVVAALIRLQFHDCFVNGCDASILIDATNS----EKTAIPNLTIRG--YDIIDEAKAAVERFCPGVVSCADLIAIAARDAVFLGGGGRYEVQTGRRDGLVSLAQNVXXXXXXXXXXXXQTMAVFANKGLNLTDMVLL 671
            +Y+  C   D   IV   VT +  + PT  A  +RL FHDCF+ GCDAS+LI ATNS    E+    N ++ G  +DI+   K A+E  CPGVVSCAD++A A RD V + GG  YEV+ GR+DG  S A  V              +++F   G  L ++V L
Sbjct:   30 YYQKTC--PDFNKIVRETVTPKQGQQPTTAAGTLRLFFHDCFMEGCDASVLI-ATNSFNKAERDDDLNESLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPFYEVKLGRKDGFESKAHKVKGNLPLANQSVPDMLSIFKKNGFTLKELVAL 190          
BLAST of CN181702 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.751e-23
Identity = 59/150 (39.33%), Postives = 87/150 (58.00%), Query Frame = 3
Query:  237 IVAGVVTARFIRDPTVVAALIRLQFHDCFVNGCDASILIDAT---NSEKTAIPNLTIRG--YDIIDEAKAAVERFCPGVVSCADLIAIAARDAVFLGGGGRYEVQTGRRDGLVSLAQNVXXXXXXXXXXXXQTMAVFANKGLNLTDMVLL 671
            I+   +T + I +PT  AA+IRL FHDCF NGCDAS+LI +T    +E+ +  NL++ G  +D+I  AK A+E  CP  VSC+D+I++A RD +   GG  Y+V  GRRD   S +  +            + +  F +KG  + +MV L
Sbjct:   36 IIRDTITNKQITNPTTAAAVIRLFFHDCFPNGCDASVLISSTAFNTAERDSSINLSLPGDGFDVIVRAKTALELACPNTVSCSDIISVATRDLLITVGGPYYDVFLGRRDSRTSKSSLLTDLLPLPSTPISKIIQQFESKGFTVQEMVAL 185          
BLAST of CN181702 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.152e-22
Identity = 67/176 (38.07%), Postives = 93/176 (52.84%), Query Frame = 3
Query:  150 LLANIAGLSHGALQVGFYRGKCGIADVEMIVAGVVTARFIRDPTVVAALIRLQFHDCFVNGCDASILIDATNSEKTAIPNL-TIRGYDIIDEAKAAVERFCPGVVSCADLIAIAARDAVFLGGGGRYEVQTGRRDGLVSLAQNVXXXXXXXXXXXXQTMAVFANK-GLNLTDMVLL 671
            +L  +   +   L   FY   C  A +  I +GV+ A    DP + A+L+RL FHDCFV GCDAS+L+  +  E+ AIPN  ++RG+ +ID  K  +E  C   VSCAD++ +AARD+V   GG  + V  GRRD + +                 +  A F  K GLN  DMV L
Sbjct:   11 VLVALVTAASAQLSPTFYDTSCPRA-LATIKSGVMAA-VTSDPRMGASLLRLHFHDCFVQGCDASVLL--SGMEQNAIPNAGSLRGFGVIDSIKTQIEAICKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSIDANENEANTDLPGFNSSRAELEAAFLKKGGLNTVDMVAL 182          
BLAST of CN181702 vs. ExPASy Swiss-Prot
Match: PER1_WHEAT (Peroxidase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.964e-22
Identity = 68/175 (38.86%), Postives = 90/175 (51.43%), Query Frame = 3
Query:  150 LLANIAGLSHGALQVGFYRGKCGIADVEMIVAGVVTARFIRDPTVVAALIRLQFHDCFVNGCDASILIDATNSEKTAIPNL-TIRGYDIIDEAKAAVERFCPGVVSCADLIAIAARDAVFLGGGGRYEVQTGRRDGLVSLAQNVXXXXXXXXXXXXQTMAVFANKGLNLTDMVLL 671
            +L  +A  + G L   FY   C  A V   +   V A    DP + A+L+RL FHDCF  GCDAS+L+  T  E+ A PN+ ++RG+ +ID  K  +E  C   VSCAD++ +AARD+V   GG  + V  GRRD   + A               Q  A F  K LN  DMV L
Sbjct:   13 VLVALATAASGQLSSTFYDTSCPRALVA--IKSGVAAAVSSDPRMGASLLRLHFHDCF--GCDASVLL--TGMEQNAGPNVGSLRGFGVIDNIKTQLESVCKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSTTASASLANSDLPGPSSSRSQLEAAFLKKNLNTVDMVAL 181          
BLAST of CN181702 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.376e-22
Identity = 64/169 (37.87%), Postives = 91/169 (53.85%), Query Frame = 3
Query:  186 LQVGFYRGKCGIADVEMIVAGVVTARFIRDPTVVAALIRLQFHDCFVNGCDASILIDAT---NSEKTAIPNLTIRG--YDIIDEAKAAVERF--CPGVVSCADLIAIAARDAVFLGGGGRYEVQTGRRDGLVSLAQNVXXXXXXXXXXXXQTMAVFANKGLNLTDMVLL 671
            L+  FY   C   +VE IV  VV  +  +    + A +RL FHDCFVNGCDAS++I +T    +EK    N+++ G  +D++ +AK A++    C   VSCAD++A+A RD V    G  Y V+ GR DGLVS A +V            +   +FA   L   DM+ L
Sbjct:   27 LKTNFYGNSC--PNVEQIVKKVVQEKIKQTFVTIPATLRLFFHDCFVNGCDASVMIQSTPTNKAEKDHPDNISLAGDGFDVVIKAKKALDAIPSCKNKVSCADILALATRDVVVAAKGPSYAVELGRFDGLVSTAASVNGNLPGPNNKVTELNKLFAKNKLTQEDMIAL 193          
BLAST of CN181702 vs. ExPASy Swiss-Prot
Match: PER1_SORBI (Cationic peroxidase SPC4 (Fragment) OS=Sorghum bicolor PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.837e-21
Identity = 66/169 (39.05%), Postives = 93/169 (55.03%), Query Frame = 3
Query:  186 LQVGFYRGKCGIADVEMIVAGVVTARFIRDPTVVAALIRLQFHDCFVNGCDASILIDATNS---EKTAIPNLTIR--GYDIIDEAKAAVERFCPG-VVSCADLIAIAARDAVFLGGGGRYEVQTGRRDGL-VSLAQNVXXXXXXXXXXXXQTMAVFANKGLNLTDMVLL 671
            L   FY+  C  A  E IV   V     RD  + A L+RL FHDCFV GCDAS+L+D + +   E+ A PNLT+R   +  I++    + + C G VVSC+D++A+AARD+V + GG  Y+V  GRRD    +  Q+V              +AV +   L+ TD+V L
Sbjct:   41 LSFDFYKRSCPKA--ESIVRSFVQDAVRRDVGLAAGLLRLHFHDCFVQGCDASVLLDGSATGPGEQQAPPNLTLRPTAFKAINDIHDRLHKECGGTVVSCSDVLALAARDSVVVSGGPSYKVPLGRRDSASFATQQDVLSGLPPPTAAVPALLAVLSKINLDATDLVAL 207          
BLAST of CN181702 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.705e-21
Identity = 64/186 (34.41%), Postives = 94/186 (50.54%), Query Frame = 3
Query:  129 LLILRQCLLANIAGLSHGALQVGFYRGKCGIADVEMIVAGVVTARFIRDPTVVAALIRLQFHDCFVNGCDASILIDAT---NSEKTAIPNLTIRG--YDIIDEAKAAVERFCPGVVSCADLIAIAARDAVFLGGGGRYEVQTGRRDGLVSLAQNVXXXXXXXXXXXXQTMAVFANKGLNLTDMVLL 671
            +L+   CLL          L   +Y   C   + E  +  +VT + I  PT     +RL FHDC V+GCDASIL+ +T    SE+ A  N ++ G  +D+I   K AVE  CP +VSC+D++  A R  + + GG R  V+ GR+D LVS    V              +++F + GL + +MV L
Sbjct:   10 ILVSSPCLL-------QANLSSDYYTKTC--PEFEETLVQIVTDKQIAAPTTAVGTLRLFFHDCMVDGCDASILVASTPRKTSERDADINRSLPGDAFDVITRIKTAVELKCPNIVSCSDILVGATRSLISMVGGPRVNVKFGRKDSLVSDMNRVEGKLARPNMTMDHIISIFESSGLTVQEMVAL 186          
The following BLAST results are available for this feature:
BLAST of CN181702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER63_ARATH4.675e-2433.68Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER45_ARATH4.675e-2438.38Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=... [more]
PER35_ARATH7.975e-2436.51Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]
PER41_ARATH1.042e-2340.85Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=... [more]
PER31_ARATH6.751e-2339.33Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER1_HORVU1.152e-2238.07Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]
PER1_WHEAT1.964e-2238.86Peroxidase OS=Triticum aestivum PE=2 SV=1[more]
PER73_ARATH4.376e-2237.87Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]
PER1_SORBI2.837e-2139.05Cationic peroxidase SPC4 (Fragment) OS=Sorghum bic... [more]
PER6_ARATH3.705e-2134.41Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0001F16_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001F16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181702 ID=CN181702; Name=CN181702; organism=Citrus sinensis; type=EST; length=673bp
GCTCTTTGAATCTGTTTAATACAAAGGTAAACAATTGGATATTGATTTCT
TCTTCCATCCCTTGGAAAAAGATGAGTGAGAGAGTAGATCATATTTGGAA
GACGAAGAAGGTGAAGCAGGCTGTGGCTTTGTTGATTCTCAGGCAGTGTT
TATTAGCAAACATCGCAGGATTGAGCCATGGTGCATTACAGGTAGGATTT
TACAGAGGAAAATGTGGGATTGCTGATGTTGAGATGATAGTAGCCGGTGT
TGTCACAGCAAGGTTCATCAGAGATCCCACTGTCGTGGCTGCCCTCATAC
GCTTGCAGTTTCATGATTGCTTTGTCAATGGTTGCGACGCATCAATTCTT
ATAGATGCCACCAACAGCGAGAAAACAGCAATTCCAAATCTGACCATAAG
GGGTTATGATATCATAGACGAAGCAAAGGCTGCTGTTGAAAGATTTTGTC
CTGGTGTCGTTTCCTGTGCTGATCTCATTGCCATTGCTGCTAGAGATGCT
GTTTTCTTGGGCGGCGGAGGAAGATATGAGGTGCAAACAGGAAGAAGAGA
CGGTTTAGTGTCTCTAGCTCAGAATGTGTCCATTTCTATCCCAGGTCCTT
CAGCTTCGATCCCTCAGACTATGGCCGTGTTTGCTAACAAAGGCCTCAAT
CTTACCGACATGGTTCTTCTGAT
back to top