CN181697

Overview
NameCN181697
Unique NameCN181697
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length511
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9291 contig Csv1_Contig9291:867..1376. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181697 vs. ExPASy Swiss-Prot
Match: CHS2_SECCE (Chalcone synthase 2 OS=Secale cereale GN=CHS2 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.065e-41
Identity = 82/120 (68.33%), Postives = 90/120 (75.00%), Query Frame = -1
Query:  152 PGLISKNIEKSLFEGFAPLGIRDWNSIFWIAHPGGPAILAQVEFXXXXXXXXXKAPRQVLSEYGNMSRACVLFILDEMRKNFVEEAKAPPGEGLDWGVLFGFGPGFTVETVVLHSVPFKA 511
            PGLISKNIE++L + F PLGI DWNS+FWIAHPGGPAIL  VE          +A R VLSEYGNMS ACVLFI+DEMRK   E+     GEG+DWGVLFGFGPG TVETVVLHSVP  A
Sbjct:  275 PGLISKNIERALEDAFKPLGIDDWNSVFWIAHPGGPAILDMVEAKVNLNKERMRATRHVLSEYGNMSSACVLFIMDEMRKRSAEDGHTTTGEGMDWGVLFGFGPGLTVETVVLHSVPVTA 394          
BLAST of CN181697 vs. ExPASy Swiss-Prot
Match: CHS1_SORBI (Chalcone synthase 1 OS=Sorghum bicolor GN=CHS1 PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.065e-41
Identity = 83/117 (70.94%), Postives = 90/117 (76.92%), Query Frame = -1
Query:  161 PGLISKNIEKSLFEGFAPLGIRDWNSIFWIAHPGGPAILAQVEFXXXXXXXXXKAPRQVLSEYGNMSRACVLFILDEMRKNFVEEAKAPPGEGLDWGVLFGFGPGFTVETVVLHSVP 511
            PGLISKNIE++L E F PLGI D+NSIFW+AHPGGPAIL QVE          +A R VLSEYGNMS ACVLFILDEMRK   E+ +   GEG DWGVLFGFGPG TVETVVLHSVP
Sbjct:  276 PGLISKNIERALEEAFKPLGITDYNSIFWVAHPGGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQTTTGEGFDWGVLFGFGPGLTVETVVLHSVP 392          
BLAST of CN181697 vs. ExPASy Swiss-Prot
Match: CHS1_SECCE (Chalcone synthase 1 OS=Secale cereale GN=CHS1 PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.065e-41
Identity = 82/120 (68.33%), Postives = 90/120 (75.00%), Query Frame = -1
Query:  152 PGLISKNIEKSLFEGFAPLGIRDWNSIFWIAHPGGPAILAQVEFXXXXXXXXXKAPRQVLSEYGNMSRACVLFILDEMRKNFVEEAKAPPGEGLDWGVLFGFGPGFTVETVVLHSVPFKA 511
            PGLISKNIE++L + F PLGI DWNS+FWIAHPGGPAIL  VE          +A R VLSEYGNMS ACVLFI+DEMRK   E+     GEG+DWGVLFGFGPG TVETVVLHSVP  A
Sbjct:  273 PGLISKNIERALEDAFKPLGIDDWNSVFWIAHPGGPAILDMVEAKVNLNKERMRATRHVLSEYGNMSSACVLFIMDEMRKRSAEDGHTTTGEGMDWGVLFGFGPGLTVETVVLHSVPVTA 392          
BLAST of CN181697 vs. ExPASy Swiss-Prot
Match: CHSY_HYDMC (Chalcone synthase OS=Hydrangea macrophylla GN=CHS PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.391e-41
Identity = 84/116 (72.41%), Postives = 88/116 (75.86%), Query Frame = -1
Query:  164 PGLISKNIEKSLFEGFAPLGIRDWNSIFWIAHPGGPAILAQVEFXXXXXXXXXKAPRQVLSEYGNMSRACVLFILDEMRKNFVEEAKAPPGEGLDWGVLFGFGPGFTVETVVLHSV 511
            PGLISKNIEKSL E F PL I DWNSIFWIAHPGGPAIL QVE          +A R VLS+YGNMS ACVLFI+DEMRKN  EE     GEGL+WGVLFGFGPG TVETVVLH V
Sbjct:  272 PGLISKNIEKSLVEAFRPLDISDWNSIFWIAHPGGPAILDQVEKKLALKPEKLRATRNVLSDYGNMSSACVLFIMDEMRKNSAEEGLMTTGEGLEWGVLFGFGPGLTVETVVLHGV 387          
BLAST of CN181697 vs. ExPASy Swiss-Prot
Match: CHSY_CHRAE (Chalcone synthase OS=Chrysosplenium americanum GN=CHS PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.391e-41
Identity = 84/118 (71.19%), Postives = 89/118 (75.42%), Query Frame = -1
Query:  161 PGLISKNIEKSLFEGFAPLGIRDWNSIFWIAHPGGPAILAQVEFXXXXXXXXXK-APRQVLSEYGNMSRACVLFILDEMRKNFVEEAKAPPGEGLDWGVLFGFGPGFTVETVVLHSVP 511
            PGLISKNIEKSL E F P+GI DWNSIFWIAHPGGPAIL QVE            A R +LSEYGNMS ACVLFILDEMRK      +A  G+GL+WGVLFGFGPG TVETVVLHSVP
Sbjct:  275 PGLISKNIEKSLIEAFKPIGINDWNSIFWIAHPGGPAILDQVEHKLAPGRRANSRATRHILSEYGNMSSACVLFILDEMRKKSARRREATTGDGLEWGVLFGFGPGLTVETVVLHSVP 392          
BLAST of CN181697 vs. ExPASy Swiss-Prot
Match: CHS2_CAMSI (Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.391e-41
Identity = 84/116 (72.41%), Postives = 89/116 (76.72%), Query Frame = -1
Query:  164 PGLISKNIEKSLFEGFAPLGIRDWNSIFWIAHPGGPAILAQVEFXXXXXXXXXKAPRQVLSEYGNMSRACVLFILDEMRKNFVEEAKAPPGEGLDWGVLFGFGPGFTVETVVLHSV 511
            PGLISKNIEKSL E F PL I DWNS+FWIAHPGGPAIL QVE          +A R VLSEYGNMS ACVLFILDEMRK+  ++     GEGLDWGVLFGFGPG TVETVVLHSV
Sbjct:  272 PGLISKNIEKSLNEAFQPLNITDWNSLFWIAHPGGPAILDQVELKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKSSAKKGLKTTGEGLDWGVLFGFGPGLTVETVVLHSV 387          
BLAST of CN181697 vs. ExPASy Swiss-Prot
Match: CHSE_IPOPU (Chalcone synthase E OS=Ipomoea purpurea GN=CHSE PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 2.373e-41
Identity = 85/116 (73.28%), Postives = 90/116 (77.59%), Query Frame = -1
Query:  164 PGLISKNIEKSLFEGFAPLGIRDWNSIFWIAHPGGPAILAQVEFXXXXXXXXXKAPRQVLSEYGNMSRACVLFILDEMRKNFVEEAKAPPGEGLDWGVLFGFGPGFTVETVVLHSV 511
            PGLISK+IEKSL E F PLGIRDWNS+FWIAHPGGPAIL QVE          +A R VLSEYGNMS ACVLFILDEMRK   +E     GEGL+WGVLFGFGPG TVETVVLHSV
Sbjct:  272 PGLISKHIEKSLNEAFQPLGIRDWNSLFWIAHPGGPAILDQVEEKLELKPEKLRATRHVLSEYGNMSSACVLFILDEMRKASSKEGLNTTGEGLEWGVLFGFGPGLTVETVVLHSV 387          
BLAST of CN181697 vs. ExPASy Swiss-Prot
Match: CHS9_DAUCA (Chalcone synthase 9 OS=Daucus carota GN=CHS9 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 2.373e-41
Identity = 84/117 (71.79%), Postives = 88/117 (75.21%), Query Frame = -1
Query:  161 PGLISKNIEKSLFEGFAPLGIRDWNSIFWIAHPGGPAILAQVEFXXXXXXXXXKAPRQVLSEYGNMSRACVLFILDEMRKNFVEEAKAPPGEGLDWGVLFGFGPGFTVETVVLHSVP 511
            PGLISKNI KSL E F PLGI DWNSIFWIAHPGGPAIL QVE          K+ RQVL +YGNMS ACVLFILDEMR    ++     GEGLDWGVLFGFGPG TVETVVLHSVP
Sbjct:  272 PGLISKNIRKSLVEAFKPLGISDWNSIFWIAHPGGPAILDQVETELSLKPDKLKSTRQVLRDYGNMSSACVLFILDEMRNASAKDGHRTTGEGLDWGVLFGFGPGLTVETVVLHSVP 388          
BLAST of CN181697 vs. ExPASy Swiss-Prot
Match: CHS1_CAMSI (Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 2.373e-41
Identity = 83/116 (71.55%), Postives = 88/116 (75.86%), Query Frame = -1
Query:  164 PGLISKNIEKSLFEGFAPLGIRDWNSIFWIAHPGGPAILAQVEFXXXXXXXXXKAPRQVLSEYGNMSRACVLFILDEMRKNFVEEAKAPPGEGLDWGVLFGFGPGFTVETVVLHSV 511
            PGLISKNIEKSL E F PLGI DWNS+FWIAHPGGPAIL QVE          +A R VLSEYGNMS ACVLFILDEMRK    +     GEGL+WGVLFGFGPG TVETVVLHS+
Sbjct:  272 PGLISKNIEKSLAEAFQPLGISDWNSLFWIAHPGGPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAADGLKTTGEGLEWGVLFGFGPGLTVETVVLHSL 387          
BLAST of CN181697 vs. ExPASy Swiss-Prot
Match: CHSY_HYPAN (Chalcone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 3.100e-41
Identity = 82/116 (70.69%), Postives = 89/116 (76.72%), Query Frame = -1
Query:  164 PGLISKNIEKSLFEGFAPLGIRDWNSIFWIAHPGGPAILAQVEFXXXXXXXXXKAPRQVLSEYGNMSRACVLFILDEMRKNFVEEAKAPPGEGLDWGVLFGFGPGFTVETVVLHSV 511
            PGLISKN+EKSL E F PLGI DWNS+FWIAHPGGPAIL QVE          +A R VLSEYGNMS ACVLFILDEMR+   E+     GEG++WGVLFGFGPG TVETVVLHSV
Sbjct:  272 PGLISKNVEKSLTEAFKPLGISDWNSLFWIAHPGGPAILDQVEAKLSLKPEKLRATRHVLSEYGNMSSACVLFILDEMRRKSKEDGLKTTGEGIEWGVLFGFGPGLTVETVVLHSV 387          
The following BLAST results are available for this feature:
BLAST of CN181697 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHS2_SECCE1.065e-4168.33Chalcone synthase 2 OS=Secale cereale GN=CHS2 PE=2... [more]
CHS1_SORBI1.065e-4170.94Chalcone synthase 1 OS=Sorghum bicolor GN=CHS1 PE=... [more]
CHS1_SECCE1.065e-4168.33Chalcone synthase 1 OS=Secale cereale GN=CHS1 PE=3... [more]
CHSY_HYDMC1.391e-4172.41Chalcone synthase OS=Hydrangea macrophylla GN=CHS ... [more]
CHSY_CHRAE1.391e-4171.19Chalcone synthase OS=Chrysosplenium americanum GN=... [more]
CHS2_CAMSI1.391e-4172.41Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 P... [more]
CHSE_IPOPU2.373e-4173.28Chalcone synthase E OS=Ipomoea purpurea GN=CHSE PE... [more]
CHS9_DAUCA2.373e-4171.79Chalcone synthase 9 OS=Daucus carota GN=CHS9 PE=2 ... [more]
CHS1_CAMSI2.373e-4171.55Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 P... [more]
CHSY_HYPAN3.100e-4170.69Chalcone synthase OS=Hypericum androsaemum PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001F14_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001F14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181697 ID=CN181697; Name=CN181697; organism=Citrus sinensis; type=EST; length=511bp
TTTTTTTTTTTTTTTTTAAAAAAAAAGGCACGATGCCTTAAACTCAATTG
ACAAAACTAAACCTTCCCACGATCAACCAATAACTCAACTGGGAAAGCAT
ACAACATAAAGTTACTGAACTACTAAACATACTGGTGGAGTTCTCACTTC
AAGCTTTGAAGGGGACACTGTGCAGCACAACGGTCTCCACGGTGAACCCC
GGCCCGAACCCGAACAGCACACCCCAATCAAGCCCTTCCCCGGGGGGGGC
TTTCGCTTCCTCAACAAAATTCTTTCTCATCTCGTCAAGGATGAACAAGA
CACAAGCCCTTGACATGTTACCGTACTCACTCAACACTTGACGTGGGGCC
TTCAGCTTCTCCCCTTTGAGGCCCAATTTAAACTCCACTTGGGCCAAAAT
TGCGGGCCCCCCGGGGTGAGCGATCCAAAATATCGAGTTCCAGTCCCTGA
TGCCAAGCGGGGCGAACCCTTCAAAAAGGCTTTTCTCTATATTCTTTGAA
ATCAAGCCGGG
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