CN181689

Overview
NameCN181689
Unique NameCN181689
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length633
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181689 vs. ExPASy Swiss-Prot
Match: 1433B_SHEEP (14-3-3 protein beta/alpha (Fragments) OS=Ovis aries GN=YWHAB PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 3.924e-14
Identity = 42/63 (66.67%), Postives = 46/63 (73.02%), Query Frame = -3
Query:  443 VFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTFDIPEDGGD 631
            VFYYEI+NSPE            AI+ELDTL+EESYKDSTLIMQLLRDNLTLWT +   D GD
Sbjct:  141 VFYYEILNSPE------------AIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGD 191          
BLAST of CN181689 vs. ExPASy Swiss-Prot
Match: 1433G_SHEEP (14-3-3 protein gamma (Fragments) OS=Ovis aries GN=YWHAG PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.544e-13
Identity = 40/62 (64.52%), Postives = 45/62 (72.58%), Query Frame = -3
Query:  446 VFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTFDIPEDGG 631
            VFYYEI             AFD+AI+ELDTL+E+SYKDSTLIMQLLRDNLTLWT D  +D G
Sbjct:  108 VFYYEIT------------AFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDG 157          
BLAST of CN181689 vs. ExPASy Swiss-Prot
Match: 14338_ORYSJ (Putative 14-3-3-like protein GF14-H OS=Oryza sativa subsp. japonica GN=GF14H PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.812e-12
Identity = 35/66 (53.03%), Postives = 49/66 (74.24%), Query Frame = -3
Query:  422 EIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTFDIPEDGGDEAQKMDI 619
            EIMNSPERA  +AKQA DEA +E+++   E YKDS L+MQLL++NL LWT ++   GG+ ++  D+
Sbjct:  163 EIMNSPERASQVAKQALDEATAEINSAGVEGYKDSMLMMQLLKENLALWTSEL--TGGETSKDDDV 226          
The following BLAST results are available for this feature:
BLAST of CN181689 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433B_SHEEP3.924e-1466.6714-3-3 protein beta/alpha (Fragments) OS=Ovis arie... [more]
1433G_SHEEP2.544e-1364.5214-3-3 protein gamma (Fragments) OS=Ovis aries GN=... [more]
14338_ORYSJ2.812e-1253.03Putative 14-3-3-like protein GF14-H OS=Oryza sativ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001F10_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181689 ID=CN181689; Name=CN181689; organism=Citrus sinensis; type=EST; length=633bp
TTTTTTTTTTTTTTTTTAAAGGAAAACAATAATTAATTAATTAAAAATGT
TGTCAAGTAAACGGCAAATAAAGTGCAAAGGGGTCTTAACACCAAGTCCA
AATTGATCAGCGGCAGCAAATATAAAAAATTCTGGGATGCAAATGATACA
AGCAGTCCAATCATGAAACTCTTGACAGGGAAGATAACACCCACATTATA
GGAACAGCACAATAACAGTACTTGAGTGTCTCTTGTAAACTAAAAAAAAC
ACCGGGAGTCATAAAGGTATTGCAGCTTCCTTGCTATCATATGCTAAAGC
TCCCAAGCTCCTGGCTGGTTCACTGAGGACAGAAAACAACAAAGATTGCA
ACTGTGCTCCAAAATAGGAAAACAAACCCACCTCTGCTTCTTCAATCTTC
ACCTTCACCATCTTTAGCAAAAATGTCCATTTTCTGGGCTTCATCACCTC
CATCCTCTGGTATGTCAAAAGTCCAAAGAGTGAGGTTGTCCCTCAATAGC
TGCATTATCAACGTGCTGTCTTTGTAAGATTCCTCACTTAATGTATCCAA
TTCTGAAATGGCTTCATCAAAGGCCTGCTTTGCAAGGTGGCATGCCCTTT
CCGGAGAGTTCATAATCTCATAGTAAAAAACTG
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