CN181689

Overview
NameCN181689
Unique NameCN181689
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length633
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181689 vs. ExPASy Swiss-Prot
Match: 1433B_HORVU (14-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.453e-25
Identity = 55/64 (85.94%), Postives = 59/64 (92.19%), Query Frame = -3
Query:  440 VFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTFDIPEDGGDE 631
            VFYYEI+NSP+RAC LAKQAFDEAISELD+LSEESYKDSTLIMQLLRDNLTLWT DI ED  +E
Sbjct:  186 VFYYEILNSPDRACDLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSDISEDAAEE 249          
BLAST of CN181689 vs. ExPASy Swiss-Prot
Match: 14338_SOLLC (14-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 6.453e-25
Identity = 56/69 (81.16%), Postives = 62/69 (89.86%), Query Frame = -3
Query:  425 VFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTFDIPEDGGDEAQKMD 631
            VFYYEIMNSPERAC LAKQ FDEAISELD+L+E++YKD TLI+QLLRDNLTLWT DIPED G+EA K D
Sbjct:  182 VFYYEIMNSPERACQLAKQVFDEAISELDSLNEDNYKDGTLILQLLRDNLTLWTSDIPED-GEEAPKGD 249          
BLAST of CN181689 vs. ExPASy Swiss-Prot
Match: 14332_SOLTU (14-3-3-like protein RA215 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.101e-24
Identity = 52/67 (77.61%), Postives = 62/67 (92.54%), Query Frame = -3
Query:  431 VFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTFDIPEDGGDEAQK 631
            VFYYEI+NSP+RAC+LAKQAFDEAI+++DTL EESYKDSTLIMQLLRDNLTLWT D+ +DG DE ++
Sbjct:  181 VFYYEILNSPDRACNLAKQAFDEAIADVDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKE 247          
BLAST of CN181689 vs. ExPASy Swiss-Prot
Match: 14332_MAIZE (14-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.101e-24
Identity = 55/67 (82.09%), Postives = 60/67 (89.55%), Query Frame = -3
Query:  431 VFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTFDIPEDGGDEAQK 631
            VFYYEI+NSP+RAC LAKQAFDEAISELDTLSEESYKDSTLIMQLL DNLTLWT DI ED  +E ++
Sbjct:  185 VFYYEILNSPDRACSLAKQAFDEAISELDTLSEESYKDSTLIMQLLHDNLTLWTSDISEDPAEEIRE 251          
BLAST of CN181689 vs. ExPASy Swiss-Prot
Match: 14332_ARATH (14-3-3-like protein GF14 omega OS=Arabidopsis thaliana GN=GRF2 PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.101e-24
Identity = 53/67 (79.10%), Postives = 61/67 (91.04%), Query Frame = -3
Query:  431 VFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTFDIPEDGGDEAQK 631
            VFYYEI+NSP+RAC+LAKQAFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWT D+ +D  DE ++
Sbjct:  182 VFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDAADEIKE 248          
BLAST of CN181689 vs. ExPASy Swiss-Prot
Match: BMH1_YEAST (Protein BMH1 OS=Saccharomyces cerevisiae GN=BMH1 PE=1 SV=4)

HSP 1 Score: 112.849 bits (281), Expect = 1.438e-24
Identity = 54/67 (80.60%), Postives = 60/67 (89.55%), Query Frame = -3
Query:  431 VFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTFDIPEDGGDEAQK 631
            VFYYEI NSP++ACHLAKQAFD+AI+ELDTLSEESYKDSTLIMQLLRDNLTLWT D+ E G  E Q+
Sbjct:  181 VFYYEIQNSPDKACHLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMSESGQAEDQQ 247          
BLAST of CN181689 vs. ExPASy Swiss-Prot
Match: 14334_SOLLC (14-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.438e-24
Identity = 54/67 (80.60%), Postives = 61/67 (91.04%), Query Frame = -3
Query:  431 VFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTFDIPEDGGDEAQK 631
            VFYYEI+NSP+RAC+LAKQAFDEAISELDTL EESYKDSTLIMQLLRDNLTLWT D  +D GD+ ++
Sbjct:  183 VFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDNADDVGDDIKE 249          
BLAST of CN181689 vs. ExPASy Swiss-Prot
Match: 1433F_TOBAC (14-3-3-like protein F OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.452e-24
Identity = 52/68 (76.47%), Postives = 63/68 (92.65%), Query Frame = -3
Query:  428 VFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTFDIPEDGGDEAQKM 631
            VFYYEI+NSP+RAC+LAKQAFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWT D+ ++G +E +++
Sbjct:  183 VFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDEGTEEMKEV 250          
BLAST of CN181689 vs. ExPASy Swiss-Prot
Match: 14333_ARATH (14-3-3-like protein GF14 psi OS=Arabidopsis thaliana GN=GRF3 PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 2.452e-24
Identity = 52/67 (77.61%), Postives = 61/67 (91.04%), Query Frame = -3
Query:  431 VFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTFDIPEDGGDEAQK 631
            VFYYEI+NSP+RAC LAKQAFD+AI+ELDTL EESYKDSTLIMQLLRDNLTLWT D+ ++ GDE ++
Sbjct:  181 VFYYEILNSPDRACSLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMTDEAGDEIKE 247          
BLAST of CN181689 vs. ExPASy Swiss-Prot
Match: 1433_CHLRE (14-3-3-like protein OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.463e-24
Identity = 54/71 (76.06%), Postives = 62/71 (87.32%), Query Frame = -3
Query:  422 VFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTFDIPED-GGDEAQKMDI 631
            VFYYEI+NSPERACHLAKQAFDEAI+ELD+L EESYKDSTLIMQLLRDNLTLWT D+ +   GD+ +  D+
Sbjct:  182 VFYYEILNSPERACHLAKQAFDEAIAELDSLGEESYKDSTLIMQLLRDNLTLWTSDMQDPAAGDDREGADM 252          
The following BLAST results are available for this feature:
BLAST of CN181689 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433B_HORVU6.453e-2585.9414-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1[more]
14338_SOLLC6.453e-2581.1614-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 P... [more]
14332_SOLTU1.101e-2477.6114-3-3-like protein RA215 OS=Solanum tuberosum PE=... [more]
14332_MAIZE1.101e-2482.0914-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE... [more]
14332_ARATH1.101e-2479.1014-3-3-like protein GF14 omega OS=Arabidopsis thal... [more]
BMH1_YEAST1.438e-2480.60Protein BMH1 OS=Saccharomyces cerevisiae GN=BMH1 P... [more]
14334_SOLLC1.438e-2480.6014-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 P... [more]
1433F_TOBAC2.452e-2476.4714-3-3-like protein F OS=Nicotiana tabacum PE=2 SV... [more]
14333_ARATH2.452e-2477.6114-3-3-like protein GF14 psi OS=Arabidopsis thalia... [more]
1433_CHLRE5.463e-2476.0614-3-3-like protein OS=Chlamydomonas reinhardtii P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001F10_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181689 ID=CN181689; Name=CN181689; organism=Citrus sinensis; type=EST; length=633bp
TTTTTTTTTTTTTTTTTAAAGGAAAACAATAATTAATTAATTAAAAATGT
TGTCAAGTAAACGGCAAATAAAGTGCAAAGGGGTCTTAACACCAAGTCCA
AATTGATCAGCGGCAGCAAATATAAAAAATTCTGGGATGCAAATGATACA
AGCAGTCCAATCATGAAACTCTTGACAGGGAAGATAACACCCACATTATA
GGAACAGCACAATAACAGTACTTGAGTGTCTCTTGTAAACTAAAAAAAAC
ACCGGGAGTCATAAAGGTATTGCAGCTTCCTTGCTATCATATGCTAAAGC
TCCCAAGCTCCTGGCTGGTTCACTGAGGACAGAAAACAACAAAGATTGCA
ACTGTGCTCCAAAATAGGAAAACAAACCCACCTCTGCTTCTTCAATCTTC
ACCTTCACCATCTTTAGCAAAAATGTCCATTTTCTGGGCTTCATCACCTC
CATCCTCTGGTATGTCAAAAGTCCAAAGAGTGAGGTTGTCCCTCAATAGC
TGCATTATCAACGTGCTGTCTTTGTAAGATTCCTCACTTAATGTATCCAA
TTCTGAAATGGCTTCATCAAAGGCCTGCTTTGCAAGGTGGCATGCCCTTT
CCGGAGAGTTCATAATCTCATAGTAAAAAACTG
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