CN181688

Overview
NameCN181688
Unique NameCN181688
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2277 contig Csv1_Contig2277:1..696. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181688 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.094e-14
Identity = 46/159 (28.93%), Postives = 81/159 (50.94%), Query Frame = 1
Query:  154 NIPLIDLQSIYSNDESVRNETLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYANSPTTYEGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPNKWPSLPPSCRELVSEYGENLVKLCGVLMKVLSINLGLQEDQFQNAFGGEE 630
            N P++D+  + + D   R  T+  I +AC +W FF+ VNHG+S E+M    ++ +E +   +E + +   +    E   S +       LDW   FFL  +P S  + ++ P L    R+++ E+   L +L   L+ +L  NLGL++   + AF G +
Sbjct:    3 NFPIVDMGKLNTED---RKSTMELIKDACENWGFFECVNHGISIEMMDTVEKLTKEHYKKCMEQRFKEMVATKGLECVQSEID-----DLDWESTFFLRHLPVS--SISEIPDLDDDYRKVMKEFALKLEELAEELLDLLCENLGLEKGYLKKAFYGSK 151          
BLAST of CN181688 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.094e-14
Identity = 57/209 (27.27%), Postives = 97/209 (46.41%), Query Frame = 1
Query:    7 LQSWPEPIVRVQALSESGIKSIPERYIKPSLQR------PNSVKHGDRDFDDSQINIPLIDLQSIYSNDESVRNETLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQE-YANSPTTYEGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPNKWPSLPPSCRELVSEYGENLVKLCGVLMKVLSINLGLQEDQFQN 612
            L+++ E    V+ L +SG+  +P  +  P+++       P+ + H           IP IDL      D   RN  +  I  A   W FFQV+NHGVS EL+++ ++  R+F     E+++E Y+   +    Y S   +      +W D F     P    +  K   LP  CR+++ EY + ++ L   L ++LS  LGL+ +   +
Sbjct:   16 LKAFDETKTGVKGLVDSGVSQVPRIFHHPTVKLSTPKPLPSDLLHLK--------TIPTIDLGGRDFQDAIKRNNAIEEIKEAAAKWGFFQVINHGVSLELLEKMKKGVRDFHEQSQEVRKEFYSRDFSRRFLYLSNFDLFSSPAANWRDTFSCTMAP----DTPKPQDLPEICRDIMMEYSKQVMNLGKFLFELLSEALGLEPNHLND 212          
BLAST of CN181688 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSJ (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. japonica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.057e-13
Identity = 48/155 (30.97%), Postives = 74/155 (47.74%), Query Frame = 1
Query:  160 PLIDLQSIYSNDESVRNETLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYANSPTTYEGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPNKWPSLPPSCRELVSEYGENLVKLCGVLMKVLSINLGLQEDQFQNAFGG 624
            P+I+++ +   +     E L    +AC +W FF+++NHG+S ELM +  +M ++ +    E +     S T  EG      V K  KLDW   FF+  +P S  N    P L    R L+  +   L  L   L+ +L  NLGL++     AF G
Sbjct:    8 PVINMELLAGEERPAAMEQLD---DACENWGFFEILNHGISTELMDEVEKMTKDHYKRVREQRFLEFASKTLKEGCDD---VNKAEKLDWESTFFVRHLPES--NIADIPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRG 154          
BLAST of CN181688 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSI (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. indica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.057e-13
Identity = 48/155 (30.97%), Postives = 74/155 (47.74%), Query Frame = 1
Query:  160 PLIDLQSIYSNDESVRNETLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYANSPTTYEGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPNKWPSLPPSCRELVSEYGENLVKLCGVLMKVLSINLGLQEDQFQNAFGG 624
            P+I+++ +   +     E L    +AC +W FF+++NHG+S ELM +  +M ++ +    E +     S T  EG      V K  KLDW   FF+  +P S  N    P L    R L+  +   L  L   L+ +L  NLGL++     AF G
Sbjct:    8 PVINMELLAGEERPAAMEQLD---DACENWGFFEILNHGISTELMDEVEKMTKDHYKRVREQRFLEFASKTLKEGCDD---VNKAEKLDWESTFFVRHLPES--NIADIPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRG 154          
BLAST of CN181688 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.803e-13
Identity = 45/159 (28.30%), Postives = 82/159 (51.57%), Query Frame = 1
Query:  154 NIPLIDLQSIYSNDESVRNETLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYANSPTTYEGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPNKWPSLPPSCRELVSEYGENLVKLCGVLMKVLSINLGLQEDQFQNAFGGEE 630
            N P+I+L+++   +   R+ T+  I +AC +W FF++VNHG+  E+M    +  +  +   +E + +   +    E   + +       LDW   FFL  +P S  N ++ P L    RE++ ++ + L KL   L+ +L  NLGL++   + AF G +
Sbjct:    3 NFPIINLENLCGAE---RDATMEMIKDACENWGFFELVNHGIPHEVMDTVEKFTKGHYKKCMEQRFKELVASKGLEAVQAEV-----TDLDWESTFFLRHLPVS--NISEVPDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSK 151          
BLAST of CN181688 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.803e-13
Identity = 48/157 (30.57%), Postives = 82/157 (52.23%), Query Frame = 1
Query:  160 PLIDLQSIYSNDESVRNETLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYANSPTTYEGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPNKWPSLPPSCRELVSEYGENLVKLCGVLMKVLSINLGLQEDQFQNAFGGEE 630
            P++DL S+ + +E  R  TL  I++AC +W FF++VNHG+S EL+    +M ++ +   +E + +   +    +   S +       LDW   FFL  +P S  N ++ P L    R+ + E+   L KL   L+ +L  NLGL++   +  F G +
Sbjct:    5 PVVDL-SLVNGEE--RAATLEKINDACENWGFFELVNHGMSTELLDTVEKMTKDHYKKTMEQRFKEMVAAKGLDDVQSEI-----HDLDWESTFFLRHLPSS--NISEIPDLEEEYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKVFYGSK 151          
BLAST of CN181688 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.355e-13
Identity = 60/222 (27.03%), Postives = 95/222 (42.79%), Query Frame = 1
Query:   70 IPERYIKPSLQRPNSVKHGDRDFDDSQINIPLIDLQSIYSNDESVRNETLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYANSPTTYEGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPNKWPSLPPSCRELVSEYG-------ENLVKLCGVLMKVLSINLGLQEDQFQNAFGGEEIGACLRVNF-------TQNVPTGPYTGP 693
            IP ++I P  ++P+         D  ++N+P IDL S  S  E+ R      I+ AC    FF VVNHGVS  L+     +   FF++PL  KQ+    P    GY S        KL W +     F   +  +         +  +   ++G       E +  L   +M++L ++LG+  D F+  F  EE  + +R+N           + TGP+  P
Sbjct:   42 IPNQFIWPDEEKPS--------IDIPELNVPFIDLSSQDSTLEAPR-----VIAEACTKHGFFLVVNHGVSESLIADAHRLMESFFDMPLAGKQKAQRKPGESCGYASSFTGRFSTKLPWKETLSFQFSNDNSGSRTVQDYFSDTLGQEFEQFGKVYQDYCEAMSSLSLKIMELLGLSLGVNRDYFRGFF--EENDSIMRLNHYPPCQTPDLTLGTGPHCDP 248          
BLAST of CN181688 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.355e-13
Identity = 45/159 (28.30%), Postives = 82/159 (51.57%), Query Frame = 1
Query:  154 NIPLIDLQSIYSNDESVRNETLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYANSPTTYEGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPNKWPSLPPSCRELVSEYGENLVKLCGVLMKVLSINLGLQEDQFQNAFGGEE 630
            N P+I+L+ +   +   R  T+  I++AC +W FF++VNHG+  E+M    ++ +  +   +E + +   +    EG    +       +DW   FFL  +P S  N ++ P L    RE++ ++ + L KL   L+ +L  NLGL++   +N F G +
Sbjct:    3 NFPIINLEKLNGAE---RVATMEKINDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVAKKGLEGVEVEV-----TDMDWESTFFLRHLPSS--NISQLPDLDDVYREVMRDFRKRLEKLAEELLDLLCENLGLEKSYLKNTFYGSK 151          
BLAST of CN181688 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.076e-13
Identity = 59/225 (26.22%), Postives = 95/225 (42.22%), Query Frame = 1
Query:   55 SGIKSIPERYIKPSLQRPNSVKHGDRDFDDSQINIPLIDLQSIYSNDESVRNETLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYANSPTTYEGYGSRLGVEKGAKLDWSDYFFLHFMPH--SLRNPNKWPSLPPSCR---ELVSEYGENLVKLCGVLMKVLSINLGLQEDQFQNAFGGEEIGACLRVNF-------TQNVPTGPYTGP 693
            SG   IP ++I P  + P             ++++PLID+  + S D +   E    +  AC    FFQVVNHG+  EL+         FF +PL  KQ     P    GY S       +KL W +       P   +L       +L    R   E+ + Y   + +L   +M+VL  +LG+    ++  F G +  + +R+N+        + + TGP+  P
Sbjct:   12 SGRADIPSQFIWPEGESPTPDAA-------EELHVPLIDIGGMLSGDPAAAAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQRALRHPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGND--SIMRLNYYPPCQRPLETLGTGPHCDP 227          
BLAST of CN181688 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.076e-13
Identity = 48/176 (27.27%), Postives = 86/176 (48.86%), Query Frame = 1
Query:  154 NIPLIDLQSIYSNDESVRNETLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYANSPTTYEGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPNKWPSLPPSCRELVSEYGENLVKLCGVLMKVLSINLGLQEDQFQNAFGGEEIGACLRVNFTQNVPTGP 681
            + P+I+++ +   +   R  T+  I++AC +W FF++VNH +  ELM +   + +E +   +E + +   + +  EG      V     +DW   FF+  +P S  N ++ P L    R+++ E+ E L KL   ++ +L  NLGL++   + AF G   G         N P  P
Sbjct:    3 SFPVINMEKLEGQE---RAATMKLINDACENWGFFELVNHSIPVELMDEVERLTKEHYKKCMEQRFKELMA-SKVEG-----AVVDANDMDWESTFFIRHLPVS--NLSEIPDLTDEHRKVMKEFAEKLEKLAEQVLDLLCENLGLEKGYLKMAFAGTTTGLPTFGTKVSNYPPCP 167          
The following BLAST results are available for this feature:
BLAST of CN181688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
ACCO_PEA8.094e-1428.931-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
ACCH3_ARATH8.094e-1427.271-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCO1_ORYSJ1.057e-1330.971-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO1_ORYSI1.057e-1330.971-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO4_PETHY1.803e-1328.301-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO1_MALDO1.803e-1330.571-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
GAOX2_ARATH2.355e-1327.03Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana G... [more]
ACCO2_SOLLC2.355e-1328.301-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
GAO1D_WHEAT3.076e-1326.22Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN... [more]
ACCO_PERAE3.076e-1327.271-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001F09_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181688 ID=CN181688; Name=CN181688; organism=Citrus sinensis; type=EST; length=696bp
GACTGCCTTCAGAGTTGGCCTGAACCAATTGTCAGAGTCCAAGCTTTATC
CGAAAGTGGCATAAAATCAATCCCGGAAAGGTACATCAAGCCATCACTCC
AAAGGCCTAATTCAGTGAAACATGGTGACCGTGATTTTGATGACTCTCAA
ATCAACATTCCACTTATTGATCTTCAGAGCATATACAGCAACGACGAGAG
TGTCCGCAATGAGACGCTGAGTTGCATCTCCAACGCGTGCCGCGACTGGG
CGTTTTTCCAAGTTGTGAACCATGGGGTGAGCCCCGAACTGATGAAGCAA
ACGAGGGAGATGTGGCGCGAGTTCTTCAATCTCCCGCTTGAGCTCAAACA
GGAGTATGCAAACTCGCCGACGACATACGAAGGCTACGGTAGCCGCTTGG
GCGTCGAGAAAGGAGCAAAGCTTGATTGGAGTGACTACTTTTTCCTTCAC
TTCATGCCTCATTCCCTCAGGAATCCCAACAAGTGGCCGTCTCTCCCACC
TTCATGCAGGGAATTAGTATCGGAATATGGTGAAAATTTGGTGAAGCTGT
GCGGAGTTCTGATGAAGGTACTATCAATAAATCTCGGACTACAAGAAGAC
CAATTTCAAAATGCTTTCGGTGGAGAGGAAATTGGTGCTTGCTTGAGGGT
TAATTTTACCCAAAATGTCCCAACCGGACCTTACACTGGGCCTCTC
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