CN181687

Overview
NameCN181687
Unique NameCN181687
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181687 vs. ExPASy Swiss-Prot
Match: FL3H_ARATH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.254e-27
Identity = 66/134 (49.25%), Postives = 86/134 (64.18%), Query Frame = -1
Query:  249 VNFYPKCPQPDLTLGLSPHSDPGGMTLLLPDENVAGLQVRR--GDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSLAFFYNPKSDLLIEPMKEFVTRNRPALYPPMTYDEYRLYIRTKG 644
            VN+YPKCPQPDLTLGL  H+DPG +TLLL D+ V GLQ  R  G  WITV+PV  AF+VN+GD    LSN  +K+ +H+ +VNS   R+S+A F NP  D  + P+K      +  L  P+T+ E  +Y R  G
Sbjct:  199 VNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQ-VGGLQATRDNGKTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPDATVYPLK-VREGEKAILEEPITFAE--MYKRKMG 328          
BLAST of CN181687 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.254e-27
Identity = 64/160 (40.00%), Postives = 96/160 (60.00%), Query Frame = -1
Query:  219 KMLFGGEEIGACLRVNFYPKCPQPDLTLGLSPHSDPGGMTLLLPDENVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSLAFFYNPKSDLLIEPMKEFVTR---NRPALYPPMTYDEY-RLYIRTKGPCGKAQVESL 686
            K+ +G +      +V+ YP CP+PDL  GL  H+D GG+ LL  D+ V GLQ+ +   WI V P+  + +VN+GDQ++V++N  YKSV HRVI  ++  R+SLA FYNP SD +I P    V +      A+YP   +D+Y +LY   K    + + E++
Sbjct:  145 KIFYGTKGPNFGSKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGQWIDVPPMRLSIVVNLGDQLEVITNGKYKSVMHRVITQTDGTRMSLASFYNPGSDAVIFPAPTLVEKEAEESKAIYPKFVFDDYMKLYAGLKFQAKEPRFEAM 304          
BLAST of CN181687 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.638e-27
Identity = 63/161 (39.13%), Postives = 96/161 (59.63%), Query Frame = -1
Query:  219 KMLFGGEEIGACLRVNFYPKCPQPDLTLGLSPHSDPGGMTLLLPDENVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSLAFFYNPKSDLLIEPMKEFVTRNR----PALYPPMTYDEY-RLYIRTKGPCGKAQVESL 686
            K  +G +      +V+ YP CP+PDL  GL  H+D GG+ LL  D+ V+GLQ+ +   WI V P+ ++ +VN+GDQ++V++N  YKSV HRVI  ++  R+SLA FYNP SD +I P    V +        +YP   +D+Y +LY   K    + + E++
Sbjct:  145 KAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHRVIAQTDGTRMSLASFYNPGSDAVIYPAPTLVEKEADQECKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAM 305          
BLAST of CN181687 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.638e-27
Identity = 61/148 (41.22%), Postives = 92/148 (62.16%), Query Frame = -1
Query:  219 RVNFYPKCPQPDLTLGLSPHSDPGGMTLLLPDENVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSLAFFYNPKSDLLIEPMKEFVTR----NRPALYPPMTYDEY-RLYIRTKGPCGKAQVESL 647
            +V+ YP CP+PDL  GL  H+D GG+ LL  D+ V+GLQ+ +   WI V P+ ++ +VN+GDQ++V++N  YKSV HRVI   +  R+SLA FYNP +D LI P    V +    +   +YP   +D+Y +LY   K    + + E++
Sbjct:  158 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGRWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGTRMSLASFYNPGNDALIYPAPALVDKEAEEHNKQVYPKFMFDDYMKLYANLKFQAKEPRFEAM 305          
BLAST of CN181687 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.139e-27
Identity = 57/135 (42.22%), Postives = 90/135 (66.67%), Query Frame = -1
Query:  252 RVNFYPKCPQPDLTLGLSPHSDPGGMTLLLPDENVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSLAFFYNPKSDLLIEPMKEFVTR--NRPALYPPMTYDEY-RLYIRTK 647
            +V+ YP CP+PDL  GL  H+D GG+ LL  D+ V+GLQ+ +  +W+ V P+ ++ +VN+GDQ++V++N  YKSV HRVI  ++ +R+S+A FYNP SD +I P    V +   +   YP   +++Y  LY++ K
Sbjct:  164 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGHWVDVPPMKHSIVVNLGDQLEVITNGKYKSVMHRVIAQTDGNRMSIASFYNPGSDAVIYPAPTLVEKEEEKCRAYPKFVFEDYMNLYLKLK 298          
BLAST of CN181687 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.793e-27
Identity = 66/135 (48.89%), Postives = 88/135 (65.19%), Query Frame = -1
Query:  249 VNFYPKCPQPDLTLGLSPHSDPGGMTLLLPDENVAGLQVRR--GDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSLAFFYNPKSDLLIEPMKEFVTRNRPALY-PPMTYDEYRLYIRTKG 644
            VN+YPKCPQPDLTLGL  H+DPG +TLLL D+ V GLQ  R  G+ WITV+PV  AF+VN+GD    LSN  +K+ +H+ +VNS   R+S+A F NP  +  + P+K  V     A+   P+T+ E  +Y R  G
Sbjct:  198 VNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQ-VGGLQATRDDGNTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATVYPLK--VREGEKAIMEEPITFAE--MYKRKMG 327          
BLAST of CN181687 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.793e-27
Identity = 61/147 (41.50%), Postives = 91/147 (61.90%), Query Frame = -1
Query:  219 RVNFYPKCPQPDLTLGLSPHSDPGGMTLLLPDENVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSLAFFYNPKSDLLIEPMKEFVTR---NRPALYPPMTYDEY-RLYIRTKGPCGKAQVESL 647
            +V+ YP CP+PDL  GL  H+D GG+ LL  D+ V+GLQ+ +   WI V P+ ++ +VN+GDQ++V++N  YKSV HRVI   +  R+SLA FYNP SD +I P    V +       +YP   +D+Y +LY   K    + + E++
Sbjct:  158 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAM 304          
BLAST of CN181687 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 3.648e-27
Identity = 61/132 (46.21%), Postives = 82/132 (62.12%), Query Frame = -1
Query:  273 EEIGACLRVNFYPKCPQPDLTLGLSPHSDPGGMTLLLPDENVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSLAFFYNPKSDLLIEPMKEFVTRNRPALYPPMTYDEY 668
            EE  + +R+N+YP C +PDLTLG  PH DP  +T+L  D +V GLQV   + W +++P P AF+VNIGD    LSN  YKS  HR +VNSE +R SLAFF  PK D ++ P +E +       YP  T+  +
Sbjct:  221 EENDSIMRLNYYPPCIKPDLTLGTGPHCDPTSLTILHQD-HVNGLQVFVENQWRSIRPNPKAFVVNIGDTFMALSNDRYKSCLHRAVVNSESERKSLAFFLCPKKDRVVTPPRELLDSITSRRYPDFTWSMF 351          
BLAST of CN181687 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.648e-27
Identity = 62/125 (49.60%), Postives = 81/125 (64.80%), Query Frame = -1
Query:  276 VNFYPKCPQPDLTLGLSPHSDPGGMTLLLPDENVAGLQVRR--GDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSLAFFYNPKSDLLIEPMKEFVTRNRPALYPPMTYDE 644
            VNFYP+CPQPDLTLGL  H+DPG +TLLL D  V GLQ  R  G NWITV+P+  AF+VN+GD    +SN  +K+ +H+ +VN E  R+S+A F NP  D  + P+        P L  P+T+ E
Sbjct:  202 VNFYPRCPQPDLTLGLKRHTDPGTITLLLQDL-VGGLQATRDGGKNWITVQPISGAFVVNLGDHGHFMSNGRFKNADHQAVVNGESSRLSIATFQNPAPDARVWPL-AVREGEEPILEEPITFTE 324          
BLAST of CN181687 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.648e-27
Identity = 58/144 (40.28%), Postives = 90/144 (62.50%), Query Frame = -1
Query:  273 KMLFGGEEIGACL---RVNFYPKCPQPDLTLGLSPHSDPGGMTLLLPDENVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSLAFFYNPKSDLLIEPMKEFVTR---NRPALYPPMTYDEY 686
            KM F G   G      +V+ YP CP+P+L  GL  H+D GG+ LL  D+ VAGLQ+ +   W+ V P+ ++ ++N+GDQ++V++N  YKSV HRV+  ++ +R+SLA FYNP SD +I P    V +    +  +YP   +++Y
Sbjct:  143 KMAFAGTTTGLPTFGTKVSNYPPCPRPELFKGLRAHTDAGGLILLFQDDRVAGLQLLKDGEWVDVPPMNHSIVINLGDQVEVITNGKYKSVMHRVVAQTDGNRMSLASFYNPGSDAVIFPAPALVEKEAEEKKEVYPKFVFEDY 286          
The following BLAST results are available for this feature:
BLAST of CN181687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
FL3H_ARATH1.254e-2749.25Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabido... [more]
ACCO_TOBAC1.254e-2740.001-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
ACCO3_PETHY1.638e-2739.131-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCO2_SOLLC1.638e-2741.221-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO_DIACA2.139e-2742.22Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
FL3H_MATIN2.793e-2748.89Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
ACCO1_PETHY2.793e-2741.501-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
GAOX1_ARATH3.648e-2746.21Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana G... [more]
FL3H_HORVU3.648e-2749.60Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
ACCO_PERAE3.648e-2740.281-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001F09_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181687 ID=CN181687; Name=CN181687; organism=Citrus sinensis; type=EST; length=689bp
TTTTTTTTTTTTTTTTTCATATGAGCAAGAAGCTCCACCACACAACATCC
CTTTGATTTATTTTGTTTCCTAAATGATACAGGCAGCTCCTCATTGTAGA
TCAAAAGCAAGAGACGAATCGAAAGTTTCCATGATCAATTGATTCATATG
GATTTAGAAGCTAATAATTTATTTAAAAAGGACAGTTTACATGTATTTAG
AACCTATGGGCTTGATGTTAAGGATTCGACTTGTGCCTTGCCACAGGGAC
CCTTTGTCCGAATGTAAAGTCTATACTCATCATAAGTCATTGGTGGATAC
AAGGCTGGTCTGTTCCTTGTAACAAATTCCTTCATTGGTTCAATGAGCAA
ATCACTCTTAGGGTTGTAGAAGAAAGCTAGTGAGACTCTGTCTTTCTCTG
AATTCACAATCACTCGATGCTCCACGCTCTTGTAAATTGCGTTGCTTAGC
ACCTGAATTTGATCTCCGATGTTAACAATAAAAGCATTCGGGACAGGCTT
AACGGTGATCCAGTTATCGCCCCTACGGACTTGGAGTCCGGCGACGTTTT
CATCGGGCAGGAGAAGGGTCATGCCACCGGGGTCTGAGTGTGGGGAGAGG
CCCAGTGTAAGGTCCGGCTGGGGACATTTTGGGTAAAAATTAACCCTCAA
GCAAGCACCAATTTCCTCTCCACCGAAAAGCATTTTGAA
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