CN181678

Overview
NameCN181678
Unique NameCN181678
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length569
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig567 contig Csv1_Contig567:111..679. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181678 vs. ExPASy Swiss-Prot
Match: CYTM_SOLTU (Multicystatin OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.870e-14
Identity = 38/103 (36.89%), Postives = 61/103 (59.22%), Query Frame = -3
Query:  247 MATVGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSSTA*LV 555
            +A +GG+ +V    NN E  +LARFA+  +NKK+N +L+F           +G +Y ITL A++ G+KK++E K+W K W  FK++ EF  V    + T  ++
Sbjct:  190 IAKLGGITDVPFP-NNPEFQDLARFAIQVYNKKENVHLEFVENLNVKQQVVAGMMYYITLAAIDAGKKKIYETKIWVKEWEDFKKVVEFKLVGDDSAKTGGII 291          

HSP 2 Score: 78.9518 bits (193), Expect = 1.870e-14
Identity = 39/91 (42.86%), Postives = 58/91 (63.74%), Query Frame = -3
Query:  280 ATVGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTV 552
            A +GG+  V    NN E  +LARFAV ++NKK+N++L+F           +G LY ITL A++ G+KK++EAK+W K W  FK++ EF  +
Sbjct:  474 AKLGGIINVPFP-NNPEFQDLARFAVQDYNKKENAHLEFVENLNVKEQLVAGMLYYITLVAIDAGKKKIYEAKIWVKEWENFKKVIEFKLI 563          

HSP 3 Score: 78.5666 bits (192), Expect = 2.442e-14
Identity = 38/103 (36.89%), Postives = 61/103 (59.22%), Query Frame = -3
Query:  244 ATVGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSSTA*LVV 552
            A +GG  +V    NN E  +LARFAV ++NKK+N++L++           +G +Y ITL A + G+KK++EAK+W K W  FK++ EF  V    +    +++
Sbjct:  568 AIIGGFTDVPFP-NNPEFQDLARFAVQDYNKKENAHLEYVENLNVKEQLVAGMIYYITLVATDAGKKKIYEAKIWVKEWEDFKKVVEFKLVGDDSAKPGGIII 669          

HSP 4 Score: 72.7886 bits (177), Expect = 1.340e-12
Identity = 37/89 (41.57%), Postives = 53/89 (59.55%), Query Frame = -3
Query:  280 VGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTV 546
            +GG  EV    N+ E  +L RFAV ++NK QN++L+F           +G LY IT  A +GG+KK++E K+W K W  FK++ EF  V
Sbjct:  382 LGGFTEVPFP-NSPEFQDLTRFAVHQYNKDQNAHLEFVENLNVKKQVVAGMLYYITFAATDGGKKKIYETKIWVKVWENFKKVVEFKLV 469          

HSP 5 Score: 70.0922 bits (170), Expect = 8.686e-12
Identity = 36/89 (40.45%), Postives = 54/89 (60.67%), Query Frame = -3
Query:  280 GGVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLEAV-EGGQKKLFEAKVWEKPWMQFKELKEFNTV 543
            GG+  V    NN +   LARFA+ ++NKKQN++L+F           +G +Y ITL A  + G+KK+++AK+W K W  FK++ EF  V
Sbjct:   99 GGIVNVP-NPNNTKFQELARFAIQDYNKKQNAHLEFVENLNVKEQVVAGIMYYITLAATDDAGKKKIYKAKIWVKEWEDFKKVVEFKLV 186          

HSP 6 Score: 69.707 bits (169), Expect = 1.134e-11
Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = -3
Query:  280 ATVGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTV 552
            A  GG+  V    N+ E  +LARFAV ++N  QN++L+F           SG +Y ITL A + G KK +EAK+W K W  FK++ +F  V
Sbjct:  285 AKTGGIINVP-NPNSPEFQDLARFAVQDYNNTQNAHLEFVENLNVKEQLVSGMMYYITLAATDAGNKKEYEAKIWVKEWEDFKKVIDFKLV 374          
BLAST of CN181678 vs. ExPASy Swiss-Prot
Match: CYT3_ORYSJ (Cysteine proteinase inhibitor 3 OS=Oryza sativa subsp. japonica GN=Os05g0409300 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 9.281e-14
Identity = 37/83 (44.58%), Postives = 50/83 (60.24%), Query Frame = -3
Query:  256 EIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSSTA 504
            E  + ARFAV E+NK Q + L+F           +GTL+D+ LE V+ G+K L+ AKVW KPW+ FK + EF  V  S S +A
Sbjct:   59 EAEDAARFAVAEYNKNQGAELEFARIVKAKRQVVTGTLHDLMLEVVDSGKKSLYSAKVWVKPWLDFKAVVEFRHVGDSQSQSA 141          
BLAST of CN181678 vs. ExPASy Swiss-Prot
Match: CYT2_ORYSJ (Cysteine proteinase inhibitor 2 OS=Oryza sativa subsp. japonica GN=Os05g0494200 PE=2 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 2.527e-11
Identity = 37/88 (42.05%), Postives = 50/88 (56.82%), Query Frame = -3
Query:  289 VGGVREVEATANNQ-EIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLEAVE-GGQKKLFEAKVWEKPWMQFKELKEF 546
            VGG+ +  A   N    V LARFAV EHN K N+ L+             G ++ +T+E  E GG  KL+EAKVWE+ W  FK+L++F
Sbjct:   56 VGGIHDAPAGRENDLTTVELARFAVAEHNSKANAMLELERVVKVRQQVVGGFMHYLTVEVKEPGGANKLYEAKVWERAWENFKQLQDF 143          
The following BLAST results are available for this feature:
BLAST of CN181678 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
CYTM_SOLTU1.870e-1436.89Multicystatin OS=Solanum tuberosum PE=2 SV=1[more]
CYT3_ORYSJ9.281e-1444.58Cysteine proteinase inhibitor 3 OS=Oryza sativa su... [more]
CYT2_ORYSJ2.527e-1142.05Cysteine proteinase inhibitor 2 OS=Oryza sativa su... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001F04_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181678 ID=CN181678; Name=CN181678; organism=Citrus sinensis; type=EST; length=569bp
GCTTGTATATATATTACAGACCAAAGGTCATTTCAATTATTTTTCACACA
GTTATAAAAGTTGCGCTGAGTTGCAGCTACTACCATAAATAATCGACACA
TAACTTGCAAAAGATTAAAGAACCAAACTCATAAATCCGGTTACATTTAT
TTTTATATTCTGAACATGGTTATAGCTCCATTCTTATTGATACTGTCTCT
TTGTTTGATCCATTGCAAGCTACACGTAGATGTCATCTTCAGTCACCACA
AGCTAAGCGGTTGAGGAGTGAGACTGAGCCACAGTATTGAATTCTTTCAA
CTCCTTGAATTGCATCCAAGGCTTCTCCCAGACCTTAGCTTCAAAAAGTT
TCTTCTGACCTCCTTCAACAGCCTCCAAGGTGATGTCGTACAGAGTCCCT
GAAACCACTTGCTGCTTCGCACTTACAACTTTTACAAATTGCAGATTTGA
ATTCTGCTTCTTGTTATGCTCATCCACAGCGAAGCGTGCGAGATTAACGA
TCTCCTGATTGTTGGCTGTTGCTTCAACCTCACGAACACCGCCTACTGTA
GCCATTGTTTTCTGCGTAA
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