CN181670

Overview
NameCN181670
Unique NameCN181670
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_STAEQ (Hypoxanthine-guanine phosphoribosyltransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=hpt PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.779e-29
Identity = 64/140 (45.71%), Postives = 92/140 (65.71%), Query Frame = -3
Query:  195 GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 614
            G+ +F+ADL++ I   +S+DF+   SY  GT S+G   +  D    +++K V+++EDI++TGTTL S+   L S+  +S+ + TLLDKP RRK  +E       Y G + PD FVVGYG+D+ ELYRNLPY+G LK E Y
Sbjct:   43 GSVMFMADLIKRIDTHLSIDFMDVSSYHGGTESTGEVQILKDLGASIENKDVLIIEDILETGTTLKSITELLQSRKVNSLEIATLLDKPNRRKADIEAK-----YVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKAEVY 177          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: TILS_LISIN (Bifunctional protein tilS/hprT OS=Listeria innocua GN=tilS/hprT PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.629e-29
Identity = 65/140 (46.43%), Postives = 92/140 (65.71%), Query Frame = -3
Query:  195 GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 614
            GA  F+ DL++ I   + +DF+   SYG+GT+SSG   +  D    V+ + V+++EDI+D+G TLS L+  +  + A SV + TLLDKPA R + +E       Y GF  P+ FVVGYG+D+AE YRNLPY+G+LKPE Y
Sbjct:  512 GATPFMTDLLKRIDTYLEMDFMDVSSYGNGTVSSGEVKIIKDLNASVEGRDVLIIEDIIDSGRTLSYLVDLIKYRKAKSVKLVTLLDKPAGRNVAIE-----ADYVGFVVPNEFVVGYGLDYAERYRNLPYIGILKPEIY 646          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_BACSU (Hypoxanthine-guanine phosphoribosyltransferase OS=Bacillus subtilis GN=hprT PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.739e-29
Identity = 63/141 (44.68%), Postives = 93/141 (65.96%), Query Frame = -3
Query:  192 GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECYK 614
            GA  F+ADL+++I   + +DF+   SYG+ T+SSG   +  D    V+ + ++++EDI+D+G TLS L+     + A S+ + TLLDKP+ RK  ++       + GFE PD FVVGYG+D+AE YRNLPY+GVLKP  Y+
Sbjct:   44 GALPFMADLIKHIDTYLEMDFMDVSSYGNSTVSSGEVKIIKDLDTSVEGRDILIIEDIIDSGLTLSYLVELFRYRKAKSIKIVTLLDKPSGRKADIK-----ADFVGFEVPDAFVVGYGLDYAERYRNLPYIGVLKPAVYE 179          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_HAEIN (Hypoxanthine phosphoribosyltransferase OS=Haemophilus influenzae GN=hpt PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.056e-28
Identity = 60/133 (45.11%), Postives = 95/133 (71.43%), Query Frame = -3
Query:  216 GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVG 614
            G+F+F+AD+VR I+LP+ ++F+   SYG+G  ++    ++ D   D+K KHV++VEDI+DTG TL  +   L  +  +S+++CTLLDKP+RR+++V +      + GFE PD FVVGYG+D+A+ +RNL Y+G
Sbjct:   46 GSFMFMADIVRQINLPVEIEFMTTSSYGTGMTTNHDVRITKDLDGDIKGKHVLIVEDIIDTGYTLEKVRDILNLREPASLTICTLLDKPSRREVEVPVE-----WVGFEIPDEFVVGYGIDYAQRHRNLGYIG 173          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_MYCLE (Hypoxanthine-guanine phosphoribosyltransferase OS=Mycobacterium leprae GN=hpt PE=3 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 2.352e-28
Identity = 63/141 (44.68%), Postives = 90/141 (63.83%), Query Frame = -3
Query:  192 GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECYK 614
            GA +F+ DL R I LP   +F+   SYGS   SSG   +  D   D+ D++V++VED+VD+G TLS L+ NL ++   S+ VCTLL KP   +  V++      Y GF+ P+ FVVGYG+D+ E YR+LPY+G+L P  Y+
Sbjct:   67 GAVIFVTDLARAIPLPTQFEFMAVSSYGSSMSSSGVVRILKDLDRDIHDRNVLIVEDVVDSGLTLSWLLRNLATRRPQSLQVCTLLRKPDALRANVDIT-----YVGFDIPNDFVVGYGLDYDERYRDLPYIGMLDPRVYQ 202          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_STRR6 (Hypoxanthine-guanine phosphoribosyltransferase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=hpt PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.012e-28
Identity = 65/140 (46.43%), Postives = 88/140 (62.86%), Query Frame = -3
Query:  195 GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 614
            G+  F+A+LV++I   I +DF+   SY  GT SSG   +  D   D+K +HV+ VEDI+DTG TL +L      + A+SV + TLLDKP  R +++E       Y  F  P+ FVVGYG+D+ E YRNLPY+GVLK E Y
Sbjct:   44 GSIPFMAELVKHIDTHIEMDFMMVSSYHGGTASSGVINIKQDVTQDIKGRHVLFVEDIIDTGQTLKNLRDMFKEREAASVKIATLLDKPEGRVVEIE-----ADYTCFTIPNEFVVGYGLDYKENYRNLPYIGVLKEEVY 178          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_STRPN (Hypoxanthine-guanine phosphoribosyltransferase OS=Streptococcus pneumoniae GN=hpt PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.012e-28
Identity = 65/140 (46.43%), Postives = 88/140 (62.86%), Query Frame = -3
Query:  195 GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 614
            G+  F+A+LV++I   I +DF+   SY  GT SSG   +  D   D+K +HV+ VEDI+DTG TL +L      + A+SV + TLLDKP  R +++E       Y  F  P+ FVVGYG+D+ E YRNLPY+GVLK E Y
Sbjct:   44 GSIPFMAELVKHIDTHIEMDFMMVSSYHGGTASSGVINIKQDVTQDIKGRHVLFVEDIIDTGQTLKNLRDMFKEREAASVKIATLLDKPEGRVVEIE-----ADYTCFTIPNEFVVGYGLDYKENYRNLPYIGVLKEEVY 178          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_DICDI (Hypoxanthine-guanine phosphoribosyltransferase OS=Dictyostelium discoideum GN=hprT PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 8.938e-28
Identity = 63/144 (43.75%), Postives = 94/144 (65.28%), Query Frame = -3
Query:  192 GAFLFLADLVRNIHLP---ISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECYK 614
            G+F+F++DLVR+IHLP   +S++F+   SYG+ T SSG   + +D +  ++ K V+++EDIVD+G TL  L+  L  +  +S+    LL K    K++V +      Y GF+ P  F++GYG+DFAE YR LPY+G LK ECYK
Sbjct:   41 GSFVFMSDLVRSIHLPNTNVSLEFMSISSYGAETSSSGVIRIMMDLRTSIEGKDVLIIEDIVDSGLTLKHLMELLNHRNPNSLHTAVLLRKKEGLKVEVPVK-----YMGFDIPMVFIIGYGLDFAENYRELPYLGELKEECYK 179          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_SALTY (Hypoxanthine phosphoribosyltransferase OS=Salmonella typhimurium GN=hpt PE=1 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 1.525e-27
Identity = 61/133 (45.86%), Postives = 90/133 (67.67%), Query Frame = -3
Query:  216 GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVG 614
            G+F+F+ADL R + +P  VDF+ A SYGSG  ++    +  D   D++ K V++VEDI+D+G TLS +   L  +   S+++CTLLDKP+RR++ V +      + GF  PD FVVGYG+D+A+ YR+LPYVG
Sbjct:   44 GSFMFMADLCREVQVPHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDIIDSGNTLSKVREILGLREPKSLAICTLLDKPSRREVDVPVE-----FVGFSIPDEFVVGYGIDYAQRYRHLPYVG 171          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_MYCAV (Hypoxanthine-guanine phosphoribosyltransferase OS=Mycobacterium avium GN=hpt PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.436e-27
Identity = 63/141 (44.68%), Postives = 88/141 (62.41%), Query Frame = -3
Query:  192 GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECYK 614
            GA +F+ DL R I LP   +F+   SYGS T SSG   +  D   D++ + V++VED+VD+G TLS L+ NL ++   S+ VCTLL KP  R   V++      Y GF+ P+ FVVGYG+D+ E YR+L Y+G L P  Y+
Sbjct:   67 GAVIFVTDLARAIPLPTQFEFMAVSSYGSSTSSSGVVRILKDLDRDIQGRDVLIVEDVVDSGLTLSWLLRNLSTRHPRSLRVCTLLRKPDARGAHVDIA-----YVGFDIPNDFVVGYGLDYDERYRDLSYIGTLDPRVYQ 202          
The following BLAST results are available for this feature:
BLAST of CN181670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
HPRT_STAEQ2.779e-2945.71Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
TILS_LISIN3.629e-2946.43Bifunctional protein tilS/hprT OS=Listeria innocua... [more]
HPRT_BACSU4.739e-2944.68Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_HAEIN1.056e-2845.11Hypoxanthine phosphoribosyltransferase OS=Haemophi... [more]
HPRT_MYCLE2.352e-2844.68Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STRR64.012e-2846.43Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STRPN4.012e-2846.43Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_DICDI8.938e-2843.75Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_SALTY1.525e-2745.86Hypoxanthine phosphoribosyltransferase OS=Salmonel... [more]
HPRT_MYCAV4.436e-2744.68Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001E24_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001E24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181670 ID=CN181670; Name=CN181670; organism=Citrus sinensis; type=EST; length=667bp
GAGGGTATATAACACCAATAACAATTTACCAAGCAAATGAAAAAACCATT
CATCTTATCAGGAGAGCCTATTAGAACTGCATTTATCATCAATTACCAAA
TGCCAAGAATCTGTAGAAGTTGCAAAGAGTCTGGATTTGTAGAATAAGTT
TATTGACCGCCCTGTCAAAGAGCCAGTGACGGATAAAATTATTTGTAGCA
TTCAGGCTTCAACACTCCAACATAAGGCAGGTTCCTATATAATTCAGCGA
AGTCCATTCCATAGCCCACAACGAAATAATCTGGACACTCAAATCCCCGA
TAGAACTTTCCTTCACCCACTAGCTCCACCTGAATCTTTCTTCTGGCTGG
TTTATCAAGGAGAGTGCAGACTGAGACAGAAGATGCTCCTTTGGATACCA
AGTTTGCAATAAGAGATGATAATGTGGTTCCTGTATCTACAATGTCCTCG
ACCAAGATTACGTGCTTGTCCTTAACATCGAGTTTCGAATCGAGGGAAAG
AACAGGGGCTCCACTGGAGAGAGTACCGGAGCCGTAGGATTCAGCACGAA
TGAAATCAACGGAGATAGGGAGGTGAATATTTCTGACCAGGTCAGCCAAG
AAGAGAAACGCTCCGGTGGCGACACCCACGACGACAGGCGGCGGGGAAAC
GGAGTTGAAATCGTGGG
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