CN181670

Overview
NameCN181670
Unique NameCN181670
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_LACLA (Hypoxanthine-guanine phosphoribosyltransferase OS=Lactococcus lactis subsp. lactis GN=hpt PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.567e-27
Identity = 66/140 (47.14%), Postives = 89/140 (63.57%), Query Frame = -3
Query:  195 GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 614
            G+  FLA+L+++I   +  DF+   SY  GT SSG   L LD    VK + +++VEDI+DTG TL  L   L  +GA +V + TLLDKP  R ++++       Y GF  P+ FVVG+G+D+ E YRNLPYVGVLKPE Y
Sbjct:   48 GSVPFLAELIKHIDCHLETDFMTVSSYHGGTKSSGEVKLILDVDTAVKGRDILIVEDIIDTGRTLKYLKELLEHRGA-NVKIVTLLDKPEGRIVEIK-----PDYSGFTIPNEFVVGFGLDYEENYRNLPYVGVLKPEVY 181          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_SHIFL (Hypoxanthine phosphoribosyltransferase OS=Shigella flexneri GN=hpt PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.291e-26
Identity = 59/133 (44.36%), Postives = 89/133 (66.92%), Query Frame = -3
Query:  216 GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVG 614
            G+F+F+ADL R + +   VDF+ A SYGSG  ++    +  D   D++ K V++VEDI+D+G TLS +   L  +   S+++CTLLDKP+RR++ V +      + GF  PD FVVGYG+D+A+ YR+LPY+G
Sbjct:   44 GSFMFMADLCREVQVSHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDIIDSGNTLSKVREILSLREPKSLAICTLLDKPSRREVNVPVE-----FIGFSIPDEFVVGYGIDYAQRYRHLPYIG 171          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_MYCTU (Hypoxanthine-guanine phosphoribosyltransferase OS=Mycobacterium tuberculosis GN=hpt PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.291e-26
Identity = 64/141 (45.39%), Postives = 85/141 (60.28%), Query Frame = -3
Query:  192 GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECYK 614
            GA LF+ DL R I +P   +F+   SYGS T SSG   +  D   D+  + V++VED+VD+G TLS L  NL S+   S+ VCTLL KP      VE+      Y GF+ P+ FVVGYG+D+ E YR+L Y+G L P  Y+
Sbjct:   67 GAVLFVTDLARAIPVPTQFEFMAVSSYGSSTSSSGVVRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNPRSLRVCTLLRKPDAVHANVEIA-----YVGFDIPNDFVVGYGLDYDERYRDLSYIGTLDPRVYQ 202          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_MYCBO (Hypoxanthine-guanine phosphoribosyltransferase OS=Mycobacterium bovis GN=hpt PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.291e-26
Identity = 64/141 (45.39%), Postives = 85/141 (60.28%), Query Frame = -3
Query:  192 GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECYK 614
            GA LF+ DL R I +P   +F+   SYGS T SSG   +  D   D+  + V++VED+VD+G TLS L  NL S+   S+ VCTLL KP      VE+      Y GF+ P+ FVVGYG+D+ E YR+L Y+G L P  Y+
Sbjct:   67 GAVLFVTDLARAIPVPTQFEFMAVSSYGSSTSSSGVVRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNPRSLRVCTLLRKPDAVHANVEIA-----YVGFDIPNDFVVGYGLDYDERYRDLSYIGTLDPRVYQ 202          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_ECOLI (Hypoxanthine phosphoribosyltransferase OS=Escherichia coli (strain K12) GN=hpt PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.291e-26
Identity = 59/133 (44.36%), Postives = 89/133 (66.92%), Query Frame = -3
Query:  216 GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVG 614
            G+F+F+ADL R + +   VDF+ A SYGSG  ++    +  D   D++ K V++VEDI+D+G TLS +   L  +   S+++CTLLDKP+RR++ V +      + GF  PD FVVGYG+D+A+ YR+LPY+G
Sbjct:   44 GSFMFMADLCREVQVSHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDIIDSGNTLSKVREILSLREPKSLAICTLLDKPSRREVNVPVE-----FIGFSIPDEFVVGYGIDYAQRYRHLPYIG 171          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_ECOL6 (Hypoxanthine phosphoribosyltransferase OS=Escherichia coli O6 GN=hpt PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.291e-26
Identity = 59/133 (44.36%), Postives = 89/133 (66.92%), Query Frame = -3
Query:  216 GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVG 614
            G+F+F+ADL R + +   VDF+ A SYGSG  ++    +  D   D++ K V++VEDI+D+G TLS +   L  +   S+++CTLLDKP+RR++ V +      + GF  PD FVVGYG+D+A+ YR+LPY+G
Sbjct:   44 GSFMFMADLCREVQVSHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDIIDSGNTLSKVREILSLREPKSLAICTLLDKPSRREVNVPVE-----FIGFSIPDEFVVGYGIDYAQRYRHLPYIG 171          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_VIBHA (Hypoxanthine phosphoribosyltransferase OS=Vibrio harveyi GN=hpt PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.686e-26
Identity = 62/138 (44.93%), Postives = 91/138 (65.94%), Query Frame = -3
Query:  201 GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPE 614
            G+F+F+ADL R I L   VDF+ A SYG+   SS    +  D   D+K K V++VEDI+DTG TL+ +   L  +   S+++CTLLDKP+RR+++V +      Y GF  PD FVVG G+D+A+ YR+LP++G + P+
Sbjct:   43 GSFVFMADLARAIELTHQVDFMTASSYGNTMESSRDVRILKDLDDDIKGKDVLIVEDIIDTGNTLNKIREILSLREPKSIAICTLLDKPSRREVEVPV-----DYVGFAIPDEFVVGVGIDYAQKYRDLPFIGKVVPQ 175          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_BUCAP (Hypoxanthine phosphoribosyltransferase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=hpt PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.686e-26
Identity = 57/133 (42.86%), Postives = 88/133 (66.17%), Query Frame = -3
Query:  216 GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVG 614
            G+F+F+ADL R I +   +DF+   SYG G +S+G   +  D   D+ +K+V++VEDI+D+G TLS ++  L  +   S+S+CTLLDKP  R++ + +      + GF  PD F+VGYG+D+A+ YR LPY+G
Sbjct:   44 GSFVFIADLCRRIKIEHEIDFMTTSSYGRGMISTGDVKIIKDLDEDIYNKNVLIVEDIIDSGKTLSKVLGILKLRNPKSLSICTLLDKPECREVNINI-----DFVGFSIPDEFMVGYGIDYAQSYRYLPYIG 171          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_RHOCA (Hypoxanthine-guanine phosphoribosyltransferase OS=Rhodobacter capsulatus GN=hpt PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.405e-26
Identity = 56/136 (41.18%), Postives = 91/136 (66.91%), Query Frame = -3
Query:  207 GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLK 614
            G+F+F+ADL+R I +P  VDF+ A SYG+ T S+    +  D +  +  + V++VEDI+DTG T+S ++  L ++    +  C +LDKP+RR++ V+       + GFE PD FVVGYG+D+A+ +RNLP++G ++
Sbjct:   46 GSFVFIADLIREIGVPCEVDFLEASSYGNETTSTREVRVLKDLRGIIGGRDVLVVEDIIDTGHTISKVMEMLRARAPRRIECCAMLDKPSRREVDVK-----ARWTGFEIPDEFVVGYGLDYAQNHRNLPFIGTVR 176          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_STRT2 (Hypoxanthine-guanine phosphoribosyltransferase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=hpt PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.434e-25
Identity = 61/140 (43.57%), Postives = 87/140 (62.14%), Query Frame = -3
Query:  195 GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 614
            GA  F+A+L+++I   I +DF+   SYG GT+SSG   +  D   +++ + VI +EDI+DTG TL  L      + ASSV + TL DKP  R + +E       Y  ++ P+ F+VG+G+D+ E YRNLPYVGVLK E Y
Sbjct:   44 GAVPFMAELIKHIDTHIEMDFMVVSSYGGGTVSSGEVKILKDVDTNIEGRDVIFIEDIIDTGRTLLYLRDMFKYRKASSVKIATLFDKPEGRVVDIE-----ADYVCYDVPNEFIVGFGLDYDEKYRNLPYVGVLKEEIY 178          
The following BLAST results are available for this feature:
BLAST of CN181670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
HPRT_LACLA7.567e-2747.14Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_SHIFL1.291e-2644.36Hypoxanthine phosphoribosyltransferase OS=Shigella... [more]
HPRT_MYCTU1.291e-2645.39Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_MYCBO1.291e-2645.39Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_ECOLI1.291e-2644.36Hypoxanthine phosphoribosyltransferase OS=Escheric... [more]
HPRT_ECOL61.291e-2644.36Hypoxanthine phosphoribosyltransferase OS=Escheric... [more]
HPRT_VIBHA1.686e-2644.93Hypoxanthine phosphoribosyltransferase OS=Vibrio h... [more]
HPRT_BUCAP1.686e-2642.86Hypoxanthine phosphoribosyltransferase OS=Buchnera... [more]
HPRT_RHOCA6.405e-2641.18Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STRT22.434e-2543.57Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001E24_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001E24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181670 ID=CN181670; Name=CN181670; organism=Citrus sinensis; type=EST; length=667bp
GAGGGTATATAACACCAATAACAATTTACCAAGCAAATGAAAAAACCATT
CATCTTATCAGGAGAGCCTATTAGAACTGCATTTATCATCAATTACCAAA
TGCCAAGAATCTGTAGAAGTTGCAAAGAGTCTGGATTTGTAGAATAAGTT
TATTGACCGCCCTGTCAAAGAGCCAGTGACGGATAAAATTATTTGTAGCA
TTCAGGCTTCAACACTCCAACATAAGGCAGGTTCCTATATAATTCAGCGA
AGTCCATTCCATAGCCCACAACGAAATAATCTGGACACTCAAATCCCCGA
TAGAACTTTCCTTCACCCACTAGCTCCACCTGAATCTTTCTTCTGGCTGG
TTTATCAAGGAGAGTGCAGACTGAGACAGAAGATGCTCCTTTGGATACCA
AGTTTGCAATAAGAGATGATAATGTGGTTCCTGTATCTACAATGTCCTCG
ACCAAGATTACGTGCTTGTCCTTAACATCGAGTTTCGAATCGAGGGAAAG
AACAGGGGCTCCACTGGAGAGAGTACCGGAGCCGTAGGATTCAGCACGAA
TGAAATCAACGGAGATAGGGAGGTGAATATTTCTGACCAGGTCAGCCAAG
AAGAGAAACGCTCCGGTGGCGACACCCACGACGACAGGCGGCGGGGAAAC
GGAGTTGAAATCGTGGG
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