CN181670

Overview
NameCN181670
Unique NameCN181670
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_STRT1 (Hypoxanthine-guanine phosphoribosyltransferase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=hpt PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.434e-25
Identity = 61/140 (43.57%), Postives = 87/140 (62.14%), Query Frame = -3
Query:  195 GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 614
            GA  F+A+L+++I   I +DF+   SYG GT+SSG   +  D   +++ + VI +EDI+DTG TL  L      + ASSV + TL DKP  R + +E       Y  ++ P+ F+VG+G+D+ E YRNLPYVGVLK E Y
Sbjct:   44 GAVPFMAELIKHIDTHIEMDFMVVSSYGGGTVSSGEVKILKDVDTNIEGRDVIFIEDIIDTGRTLLYLRDMFKYRKASSVKIATLFDKPEGRVVDIE-----ADYVCYDVPNEFIVGFGLDYDEKYRNLPYVGVLKEEIY 178          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_BUCAI (Hypoxanthine phosphoribosyltransferase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=hpt PE=3 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.061e-24
Identity = 56/134 (41.79%), Postives = 88/134 (65.67%), Query Frame = -3
Query:  216 GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFE-CPDYFVVGYGMDFAELYRNLPYVG 614
            G+F+F++DL R IH+   +DF+   SYG G LSSG   +  D   D+ +K+V++VEDI+D+G TLS ++  L  +   S+S+CTLLDKP  R++ + +      + GF    ++F+VGYG+D+A+ YR LP +G
Sbjct:   44 GSFIFISDLCRRIHIEHEIDFMTTSSYGRGMLSSGDVKIIKDLDEDIYNKNVLIVEDIIDSGKTLSKVLDILKLRNPKSLSICTLLDKPECREVNINV-----DFIGFSILENFFIVGYGIDYAQSYRYLPNIG 172          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_STRA5 (Hypoxanthine-guanine phosphoribosyltransferase OS=Streptococcus agalactiae serotype V GN=hpt PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.995e-24
Identity = 58/140 (41.43%), Postives = 86/140 (61.43%), Query Frame = -3
Query:  195 GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 614
            G+  F+A+L+++I   + +DF+   SY  GT SSG   +  D   +++ + VI +EDI+DTG TL  L      + A+SV V TL DKP  R + ++       Y  ++ P+ F+VG+G+D+AE YRNLPYVGVLK E Y
Sbjct:   44 GSVPFMAELLKHIDTHVEIDFMVVSSYHGGTTSSGEVKILKDVDTNIEGRDVIFIEDIIDTGRTLKYLRDMFKYRQANSVKVATLFDKPEGRLVDID-----ADYVCYDIPNEFIVGFGLDYAENYRNLPYVGVLKEEIY 178          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_STRA3 (Hypoxanthine-guanine phosphoribosyltransferase OS=Streptococcus agalactiae serotype III GN=hpt PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.995e-24
Identity = 58/140 (41.43%), Postives = 86/140 (61.43%), Query Frame = -3
Query:  195 GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 614
            G+  F+A+L+++I   + +DF+   SY  GT SSG   +  D   +++ + VI +EDI+DTG TL  L      + A+SV V TL DKP  R + ++       Y  ++ P+ F+VG+G+D+AE YRNLPYVGVLK E Y
Sbjct:   44 GSVPFMAELLKHIDTHVEIDFMVVSSYHGGTTSSGEVKILKDVDTNIEGRDVIFIEDIIDTGRTLKYLRDMFKYRQANSVKVATLFDKPEGRLVDID-----ADYVCYDIPNEFIVGFGLDYAENYRNLPYVGVLKEEIY 178          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_STRP8 (Hypoxanthine-guanine phosphoribosyltransferase OS=Streptococcus pyogenes serotype M18 GN=hpt PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.023e-23
Identity = 56/140 (40.00%), Postives = 87/140 (62.14%), Query Frame = -3
Query:  195 GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 614
            G+  F+A+L+++I   + +DF+   SY  GT SSG   +  D   +++ + +I+VEDI+DTG TL  L      + A+++ + TL DKP  R +++E       Y  +  P+ F+VG+G+D+AE YRNLPYVGVLK E Y
Sbjct:   44 GSVPFMAELMKHIDTHVEIDFMVVSSYHGGTSSSGEVKILKDVDTNIEGRDIIIVEDIIDTGRTLKYLRDMFKYRKANTIKIATLFDKPEGRVVKIE-----ADYVCYNIPNEFIVGFGLDYAENYRNLPYVGVLKEEVY 178          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_STRP6 (Hypoxanthine-guanine phosphoribosyltransferase OS=Streptococcus pyogenes serotype M6 GN=hpt PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.023e-23
Identity = 56/140 (40.00%), Postives = 87/140 (62.14%), Query Frame = -3
Query:  195 GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 614
            G+  F+A+L+++I   + +DF+   SY  GT SSG   +  D   +++ + +I+VEDI+DTG TL  L      + A+++ + TL DKP  R +++E       Y  +  P+ F+VG+G+D+AE YRNLPYVGVLK E Y
Sbjct:   44 GSVPFMAELMKHIDTHVEIDFMVVSSYHGGTSSSGEVKILKDVDTNIEGRDIIIVEDIIDTGRTLKYLRDMFKYRKANTIKIATLFDKPEGRVVKIE-----ADYVCYNIPNEFIVGFGLDYAENYRNLPYVGVLKEEVY 178          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_STRP3 (Hypoxanthine-guanine phosphoribosyltransferase OS=Streptococcus pyogenes serotype M3 GN=hpt PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.023e-23
Identity = 56/140 (40.00%), Postives = 87/140 (62.14%), Query Frame = -3
Query:  195 GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 614
            G+  F+A+L+++I   + +DF+   SY  GT SSG   +  D   +++ + +I+VEDI+DTG TL  L      + A+++ + TL DKP  R +++E       Y  +  P+ F+VG+G+D+AE YRNLPYVGVLK E Y
Sbjct:   44 GSVPFMAELMKHIDTHVEIDFMVVSSYHGGTSSSGEVKILKDVDTNIEGRDIIIVEDIIDTGRTLKYLRDMFKYRKANTIKIATLFDKPEGRVVKIE-----ADYVCYNIPNEFIVGFGLDYAENYRNLPYVGVLKEEVY 178          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_STRMU (Hypoxanthine-guanine phosphoribosyltransferase OS=Streptococcus mutans GN=hpt PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.336e-23
Identity = 57/140 (40.71%), Postives = 87/140 (62.14%), Query Frame = -3
Query:  195 GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 614
            G+  F+A+L+++I   I +DF+   SY  GT SSG   +  D   +++++ VI +EDI+DTG TL  L      + A+SV + TL DKP  R + ++       Y  ++ P+ F+VG+G+D+AE YRNLPYVGVLK + Y
Sbjct:   44 GSVPFMAELMKHIDTHIEIDFMVVSSYHGGTTSSGEVKILKDVDTNIENRDVIFIEDIIDTGRTLKYLRDMFKYRQANSVRIATLFDKPEGRVVDID-----ADYVCYKVPNEFIVGFGLDYAENYRNLPYVGVLKEDVY 178          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_LEIDO (Hypoxanthine-guanine phosphoribosyltransferase OS=Leishmania donovani PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.075e-23
Identity = 62/144 (43.06%), Postives = 92/144 (63.89%), Query Frame = -3
Query:  192 GAFLFLADLVRNIH---LPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECYK 614
            G+F+F ADL R +    +P+ V+FI A SYG+G  +SG   + LD +  V+++H+++VEDIVD+  TL  L+  +++K  +S+    LLDKP+ RK++V LV     Y     P  FV+GYGMD+AE YR L  + VLK E Y+
Sbjct:   67 GSFIFTADLARFLADEGVPVKVEFICASSYGTGVETSGQVRMLLDVRDSVENRHILIVEDIVDSAITLQYLMRFMLAKKPASLKTVVLLDKPSGRKVEV-LVD----YPVITIPHAFVIGYGMDYAESYRELRDICVLKKEYYE 205          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HGXR_TRIFO (Hypoxanthine-guanine-xanthine phosphoribosyltransferase OS=Tritrichomonas foetus GN=HPT PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 8.657e-23
Identity = 56/141 (39.72%), Postives = 84/141 (59.57%), Query Frame = -3
Query:  195 TGAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 617
            TGA  F  DL++++   +  D+I   SY SGT S+G   +S D K +++ +HV++VEDI+DTG T+  L+ NL  +  +S+ VCTL DK   +K     +     Y GF   + +++GYG DF   YRNLP +G+LK   Y
Sbjct:   47 TGAVFFYTDLLKHLDFQLEPDYIICSSY-SGTKSTGNLTISKDLKTNIEGRHVLVVEDIIDTGLTMYQLLNNLQMRKPASLKVCTLCDKDIGKKAYDVPID----YCGFVVENRYIIGYGFDFHNKYRNLPVIGILKESVY 182          
The following BLAST results are available for this feature:
BLAST of CN181670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
HPRT_STRT12.434e-2543.57Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_BUCAI2.061e-2441.79Hypoxanthine phosphoribosyltransferase OS=Buchnera... [more]
HPRT_STRA55.995e-2441.43Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STRA35.995e-2441.43Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STRP81.023e-2340.00Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STRP61.023e-2340.00Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STRP31.023e-2340.00Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STRMU1.336e-2340.71Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_LEIDO5.075e-2343.06Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HGXR_TRIFO8.657e-2339.72Hypoxanthine-guanine-xanthine phosphoribosyltransf... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0001E24_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001E24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181670 ID=CN181670; Name=CN181670; organism=Citrus sinensis; type=EST; length=667bp
GAGGGTATATAACACCAATAACAATTTACCAAGCAAATGAAAAAACCATT
CATCTTATCAGGAGAGCCTATTAGAACTGCATTTATCATCAATTACCAAA
TGCCAAGAATCTGTAGAAGTTGCAAAGAGTCTGGATTTGTAGAATAAGTT
TATTGACCGCCCTGTCAAAGAGCCAGTGACGGATAAAATTATTTGTAGCA
TTCAGGCTTCAACACTCCAACATAAGGCAGGTTCCTATATAATTCAGCGA
AGTCCATTCCATAGCCCACAACGAAATAATCTGGACACTCAAATCCCCGA
TAGAACTTTCCTTCACCCACTAGCTCCACCTGAATCTTTCTTCTGGCTGG
TTTATCAAGGAGAGTGCAGACTGAGACAGAAGATGCTCCTTTGGATACCA
AGTTTGCAATAAGAGATGATAATGTGGTTCCTGTATCTACAATGTCCTCG
ACCAAGATTACGTGCTTGTCCTTAACATCGAGTTTCGAATCGAGGGAAAG
AACAGGGGCTCCACTGGAGAGAGTACCGGAGCCGTAGGATTCAGCACGAA
TGAAATCAACGGAGATAGGGAGGTGAATATTTCTGACCAGGTCAGCCAAG
AAGAGAAACGCTCCGGTGGCGACACCCACGACGACAGGCGGCGGGGAAAC
GGAGTTGAAATCGTGGG
back to top