CN181670

Overview
NameCN181670
Unique NameCN181670
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3695 contig Csv1_Contig3695:101..767. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_AQUAE (Hypoxanthine-guanine phosphoribosyltransferase OS=Aquifex aeolicus GN=hpt PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.929e-22
Identity = 57/132 (43.18%), Postives = 78/132 (59.09%), Query Frame = -3
Query:  219 GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYV 614
            GAF+FLADLVR     + V+F++  SYG G  SSG   +  D  +D++ K V+LV+DI+DTG T+  +   L+ K    +  C  LDK  RRK+          + GFE PD F+VGYG+D+ E  RNLP V
Sbjct:   47 GAFIFLADLVRAFDRFVFVEFMQVSSYGKGMKSSGTIKIVKDLDMDIEGKEVLLVDDILDTGLTMKEIHDYLLMKKPKVLKTCVFLDKKERRKVDF-----NADFVGFEVPDKFLVGYGLDWGEYGRNLPEV 173          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_CRIFA (Hypoxanthine-guanine phosphoribosyltransferase OS=Crithidia fasciculata GN=HGPRT PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.633e-21
Identity = 61/144 (42.36%), Postives = 87/144 (60.42%), Query Frame = -3
Query:  192 GAFLFLADLVRNI---HLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECYK 614
            G+F+F ADL R +    +P+ ++FI A SYG+   +SG   L LD +  V+++H+++VEDIVD+  TL  L   L +K  +S+    LLDKP+ RK+ + +      Y     P  FV+GYGMDFAE YR L  V VLK E Y+
Sbjct:   64 GSFMFTADLARFLCDEGVPVRIEFICASSYGTDVKTSGEVRLLLDVRDPVENRHLLIVEDIVDSAITLEYLKRFLQAKQPASLKTVVLLDKPSGRKVTLSV-----DYPVITIPHAFVIGYGMDFAEAYRELRDVCVLKKEYYE 202          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_TRYBB (Hypoxanthine-guanine phosphoribosyltransferase OS=Trypanosoma brucei brucei GN=HGPRT PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.358e-20
Identity = 54/144 (37.50%), Postives = 82/144 (56.94%), Query Frame = -3
Query:  192 GAFLFLADLVR---NIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECYK 614
            G+F+F AD+VR   +  +P  V+F+RA SYG  T S G   +  D   D++ KHV+++EDI+DT  TL  ++ +L     +S+     +DKP  RKI          Y   + P+ FVVGYG+D+ + YR +  V +LKP  Y+
Sbjct:   55 GSFVFTADMVRILGDFGVPTRVEFLRASSYGHDTKSCGRVDVKADGLCDIRGKHVLVLEDILDTALTLREVVDSLKKSEPASIKTLVAIDKPGGRKIPFTAE-----YVVADVPNVFVVGYGLDYDQSYREVRDVVILKPSVYE 193          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_MYCPN (Hypoxanthine-guanine phosphoribosyltransferase OS=Mycoplasma pneumoniae GN=hpt PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.420e-18
Identity = 48/138 (34.78%), Postives = 77/138 (55.80%), Query Frame = -3
Query:  201 GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPE 614
            G   FL  L+      + +DF+   SY  G+    AP + LD   D K K ++L+EDIVD+G ++  ++  L ++ A SV + + ++K   R+  +++      Y  F+  D F+VG+G+D+   YRNLPYVGV  PE
Sbjct:   41 GCIPFLGKLISQFTFDLQLDFVAVASYHGGSRQQEAPKIVLDMSHDPKGKDILLIEDIVDSGRSIKLVLDLLHTRKAKSVILVSFIEKLKPREADIKV-----DYSCFKNQDEFLVGFGLDYQGFYRNLPYVGVFDPE 173          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_MYCGE (Hypoxanthine-guanine phosphoribosyltransferase OS=Mycoplasma genitalium GN=hpt PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.162e-17
Identity = 44/138 (31.88%), Postives = 77/138 (55.80%), Query Frame = -3
Query:  201 GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPE 614
            G   FL  ++      + +DF+   SY    +    P + LD   D KDK ++L+EDIVD+G ++  +I  L ++ A S+++ +L++K   +   + +      +  F+  D F+VG+G+D+   YRNLPYVGV +P+
Sbjct:   41 GCIPFLGKVISKFSFDLQLDFMAVASYHGSHVQKQPPKIVLDMSHDPKDKDILLIEDIVDSGRSIKLVIDLLKTRHAKSITLISLIEKIKPKAFDINI-----DFSCFKVKDNFLVGFGLDYDGFYRNLPYVGVFEPD 173          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_SCHMA (Hypoxanthine-guanine phosphoribosyltransferase OS=Schistosoma mansoni GN=HGPRT PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.435e-17
Identity = 59/148 (39.86%), Postives = 87/148 (58.78%), Query Frame = -3
Query:  210 GAFLFLADLV---------RNIHLPISVDFIRAESYGSGTLSSGAPVLS-LDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYR---GFECPDYFVVGYGMDFAELYRNLPYVGVL 614
            G F FLADLV         R I LP+SV+F+R +SY +  +S   P+L+ L    + KDK+V++VEDI+DTG T++ LI++L S    SV V +LL         V+       YR   GFE P+ FVVGY +D+ + +R+L ++ V+
Sbjct:  130 GGFKFLADLVDGLERTVRARGIVLPMSVEFVRVKSYVND-VSIHEPILTGLGDPSEYKDKNVLVVEDIIDTGKTITKLISHLDSLSTKSVKVASLL---------VKRTSPRNDYRPDVGFEVPNRFVVGYALDYNDNFRDLHHICVI 267          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_CHICK (Hypoxanthine-guanine phosphoribosyltransferase OS=Gallus gallus GN=HPRT1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.284e-15
Identity = 51/144 (35.42%), Postives = 78/144 (54.17%), Query Frame = -3
Query:  210 GAFLFLADLVRNIH---------LPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVL 614
            G + F ADL+  I          +P++VDFIR +SY +   +    V+  D    +  K+V++VEDI+DTG T+ +L++ L       V V +LL K   R      VG    + GFE PD FVVGY +D+ E +R+L ++ V+
Sbjct:   70 GGYKFFADLLDYIKALNRNSDKSIPMTVDFIRLKSYCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMKTLLSLLKQYNPKMVKVASLLVKRTPRS-----VGYRPDFVGFEVPDKFVVGYALDYNEYFRDLNHICVI 208          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_BOVIN (Hypoxanthine-guanine phosphoribosyltransferase OS=Bos taurus GN=HPRT1 PE=2 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 2.284e-15
Identity = 52/144 (36.11%), Postives = 78/144 (54.17%), Query Frame = -3
Query:  210 GAFLFLADLVRNIH---------LPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVL 614
            G + F ADL+  I          +P++VDFIR +SY +   +    V+  D    +  K+V++VEDI+DTG T+ +L+A +       V V +LL K   R      VG    + GFE PD FVVGY +D+ E +R+L +V V+
Sbjct:   70 GGYKFFADLLDYIKALNRNSDKSIPMTVDFIRLKSYCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLALVKKHKPKMVKVASLLMKRTPRS-----VGYKPDFVGFEIPDKFVVGYALDYNEYFRDLNHVCVI 208          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_PIG (Hypoxanthine-guanine phosphoribosyltransferase OS=Sus scrofa GN=HPRT1 PE=2 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 2.982e-15
Identity = 51/144 (35.42%), Postives = 78/144 (54.17%), Query Frame = -3
Query:  210 GAFLFLADLVRNIH---------LPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVL 614
            G + F ADL+  I          +P++VDFIR +SY +   +    V+  D    +  K+V++VEDI+DTG T+ +L++ +       V V +LL K   R      VG    + GFE PD FVVGY +D+ E +R+L +V V+
Sbjct:   70 GGYKFFADLLDYIKALNRNSDRSIPMTVDFIRLKSYCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVKQHNPKMVKVASLLVKRTPRS-----VGYRPDFVGFEIPDKFVVGYALDYNEYFRDLNHVCVI 208          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_MUSSP (Hypoxanthine-guanine phosphoribosyltransferase (Fragment) OS=Mus spretus GN=Hprt1 PE=1 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 2.982e-15
Identity = 51/144 (35.42%), Postives = 78/144 (54.17%), Query Frame = -3
Query:  210 GAFLFLADLVRNIH---------LPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVL 614
            G + F ADL+  I          +P++VDFIR +SY +   +    V+  D    +  K+V++VEDI+DTG T+ +L++ +       V V +LL K   R      VG    + GFE PD FVVGY +D+ E +R+L +V V+
Sbjct:   70 GGYKFFADLLDYIKALNRNSDRSIPMTVDFIRLKSYCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVKQYSPKMVKVASLLVKRTSRS-----VGYRPDFVGFEIPDKFVVGYALDYNEYFRDLNHVCVI 208          
The following BLAST results are available for this feature:
BLAST of CN181670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
HPRT_AQUAE1.929e-2243.18Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_CRIFA1.633e-2142.36Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_TRYBB2.358e-2037.50Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_MYCPN6.420e-1834.78Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_MYCGE4.162e-1731.88Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_SCHMA5.435e-1739.86Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_CHICK2.284e-1535.42Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_BOVIN2.284e-1536.11Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_PIG2.982e-1535.42Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_MUSSP2.982e-1535.42Hypoxanthine-guanine phosphoribosyltransferase (Fr... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0001E24_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001E24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181670 ID=CN181670; Name=CN181670; organism=Citrus sinensis; type=EST; length=667bp
GAGGGTATATAACACCAATAACAATTTACCAAGCAAATGAAAAAACCATT
CATCTTATCAGGAGAGCCTATTAGAACTGCATTTATCATCAATTACCAAA
TGCCAAGAATCTGTAGAAGTTGCAAAGAGTCTGGATTTGTAGAATAAGTT
TATTGACCGCCCTGTCAAAGAGCCAGTGACGGATAAAATTATTTGTAGCA
TTCAGGCTTCAACACTCCAACATAAGGCAGGTTCCTATATAATTCAGCGA
AGTCCATTCCATAGCCCACAACGAAATAATCTGGACACTCAAATCCCCGA
TAGAACTTTCCTTCACCCACTAGCTCCACCTGAATCTTTCTTCTGGCTGG
TTTATCAAGGAGAGTGCAGACTGAGACAGAAGATGCTCCTTTGGATACCA
AGTTTGCAATAAGAGATGATAATGTGGTTCCTGTATCTACAATGTCCTCG
ACCAAGATTACGTGCTTGTCCTTAACATCGAGTTTCGAATCGAGGGAAAG
AACAGGGGCTCCACTGGAGAGAGTACCGGAGCCGTAGGATTCAGCACGAA
TGAAATCAACGGAGATAGGGAGGTGAATATTTCTGACCAGGTCAGCCAAG
AAGAGAAACGCTCCGGTGGCGACACCCACGACGACAGGCGGCGGGGAAAC
GGAGTTGAAATCGTGGG
back to top