CN181670

Overview
NameCN181670
Unique NameCN181670
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3695 contig Csv1_Contig3695:101..767. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_MOUSE (Hypoxanthine-guanine phosphoribosyltransferase OS=Mus musculus GN=Hprt1 PE=1 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 2.982e-15
Identity = 51/144 (35.42%), Postives = 78/144 (54.17%), Query Frame = -3
Query:  210 GAFLFLADLVRNIH---------LPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVL 614
            G + F ADL+  I          +P++VDFIR +SY +   +    V+  D    +  K+V++VEDI+DTG T+ +L++ +       V V +LL K   R      VG    + GFE PD FVVGY +D+ E +R+L +V V+
Sbjct:   70 GGYKFFADLLDYIKALNRNSDRSIPMTVDFIRLKSYCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVKQYSPKMVKVASLLVKRTSRS-----VGYRPDFVGFEIPDKFVVGYALDYNEYFRDLNHVCVI 208          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_CANFA (Hypoxanthine-guanine phosphoribosyltransferase OS=Canis familiaris GN=HPRT1 PE=2 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 2.982e-15
Identity = 51/144 (35.42%), Postives = 78/144 (54.17%), Query Frame = -3
Query:  210 GAFLFLADLVRNIH---------LPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVL 614
            G + F ADL+  I          +P++VDFIR +SY +   +    V+  D    +  K+V++VEDI+DTG T+ +L++ +       V V +LL K   R      VG    + GFE PD FVVGY +D+ E +R+L +V V+
Sbjct:   70 GGYKFFADLLDYIKALNRNSDGSIPMTVDFIRLKSYCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVKEHNPKMVKVASLLVKRTPRS-----VGYKPDFVGFEIPDKFVVGYALDYNEYFRDLNHVCVI 208          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_PANTR (Hypoxanthine-guanine phosphoribosyltransferase OS=Pan troglodytes GN=HPRT1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.895e-15
Identity = 51/144 (35.42%), Postives = 78/144 (54.17%), Query Frame = -3
Query:  210 GAFLFLADLVRNIH---------LPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVL 614
            G + F ADL+  I          +P++VDFIR +SY +   +    V+  D    +  K+V++VEDI+DTG T+ +L++ +       V V +LL K   R      VG    + GFE PD FVVGY +D+ E +R+L +V V+
Sbjct:   70 GGYKFFADLLDYIKALNRNSDRSIPMTVDFIRLKSYCNDQSTGDTKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRTPRS-----VGYKPDFVGFEIPDKFVVGYALDYNEYFRDLNHVCVI 208          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_RAT (Hypoxanthine-guanine phosphoribosyltransferase OS=Rattus norvegicus GN=Hprt1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.087e-15
Identity = 51/144 (35.42%), Postives = 78/144 (54.17%), Query Frame = -3
Query:  210 GAFLFLADLVRNIH---------LPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVL 614
            G + F ADL+  I          +P++VDFIR +SY +   +    V+  D    +  K+V++VEDI+DTG T+ +L++ +       V V +LL K   R      VG    + GFE PD FVVGY +D+ E +R+L +V V+
Sbjct:   70 GGYKFFADLLDYIKALNRNSDRSIPMTVDFIRLKSYCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVKQYSPKMVKVASLLVKRTSRS-----VGYRPDFVGFEIPDKFVVGYALDYNEHFRDLNHVCVI 208          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_MERUN (Hypoxanthine-guanine phosphoribosyltransferase OS=Meriones unguiculatus GN=HPRT1 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.087e-15
Identity = 51/144 (35.42%), Postives = 78/144 (54.17%), Query Frame = -3
Query:  210 GAFLFLADLVRNIH---------LPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVL 614
            G + F ADL+  I          +P++VDFIR +SY +   +    V+  D    +  K+V++VEDI+DTG T+ +L++ +       V V +LL K   R      VG    + GFE PD FVVGY +D+ E +R+L +V V+
Sbjct:   70 GGYKFFADLLDYIKSLNRNTDRSIPMTVDFIRLKSYCNDQSTGDIKVIGGDDLSALTGKNVLIVEDIIDTGKTMQTLLSLVQKYSPKMVKVASLLVKRTPRS-----VGYRPDFVGFEIPDKFVVGYALDYNEYFRDLNHVCVI 208          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_MACFA (Hypoxanthine-guanine phosphoribosyltransferase OS=Macaca fascicularis GN=HPRT1 PE=2 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 5.087e-15
Identity = 51/144 (35.42%), Postives = 78/144 (54.17%), Query Frame = -3
Query:  210 GAFLFLADLVRNIH---------LPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVL 614
            G + F ADL+  I          +P++VDFIR +SY +   +    V+  D    +  K+V++VEDI+DTG T+ +L++ +       V V +LL K   R      VG    + GFE PD FVVGY +D+ E +R+L +V V+
Sbjct:   70 GGYKFFADLLDYIKALNRNSDRSIPMTVDFIRLKSYCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRTPRS-----VGYKPDFVGFEIPDKFVVGYALDYNEYFRDLNHVCVI 208          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_HUMAN (Hypoxanthine-guanine phosphoribosyltransferase OS=Homo sapiens GN=HPRT1 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.087e-15
Identity = 51/144 (35.42%), Postives = 78/144 (54.17%), Query Frame = -3
Query:  210 GAFLFLADLVRNIH---------LPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVL 614
            G + F ADL+  I          +P++VDFIR +SY +   +    V+  D    +  K+V++VEDI+DTG T+ +L++ +       V V +LL K   R      VG    + GFE PD FVVGY +D+ E +R+L +V V+
Sbjct:   70 GGYKFFADLLDYIKALNRNSDRSIPMTVDFIRLKSYCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRTPRS-----VGYKPDFVGFEIPDKFVVGYALDYNEYFRDLNHVCVI 208          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: HPRT_CRIGR (Hypoxanthine-guanine phosphoribosyltransferase OS=Cricetulus griseus GN=HPRT1 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.087e-15
Identity = 50/144 (34.72%), Postives = 78/144 (54.17%), Query Frame = -3
Query:  210 GAFLFLADLVRNIH---------LPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVL 614
            G + F ADL+  I          +P++VDFIR +SY +   +    V+  D    +  K+V++VEDI+DTG T+ +L++ +       V V +LL K   R      VG    + GFE PD FVVGY +D+ E +R+L ++ V+
Sbjct:   70 GGYKFFADLLDYIKALNRNSDRSIPMTVDFIRLKSYCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVKRYNLKMVKVASLLVKRTSRS-----VGYRPDFVGFEIPDKFVVGYALDYNEYFRDLNHICVI 208          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: PRDC1_HUMAN (Phosphoribosyltransferase domain-containing protein 1 OS=Homo sapiens GN=PRTFDC1 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.253e-13
Identity = 46/144 (31.94%), Postives = 76/144 (52.78%), Query Frame = -3
Query:  210 GAFLFLADLVRNIH---------LPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVL 614
            G + F ADLV ++          + + VDFIR +SY +        ++  D    +  K+V++VED+V TG T+ +L++N+     + + V +LL K   R       G    Y GFE P+ FVVGY +D+ E +R+L ++ V+
Sbjct:   77 GGYKFCADLVEHLKNISRNSDRFVSMKVDFIRLKSYRNDQSMGEMQIIGGDDLSTLAGKNVLIVEDVVGTGRTMKALLSNIEKYKPNMIKVASLLVKRTSRS-----DGFRPDYAGFEIPNLFVVGYALDYNEYFRDLNHICVI 215          
BLAST of CN181670 vs. ExPASy Swiss-Prot
Match: PRDC1_XENTR (Phosphoribosyltransferase domain-containing protein 1 OS=Xenopus tropicalis GN=prtfdc1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.363e-12
Identity = 45/144 (31.25%), Postives = 74/144 (51.39%), Query Frame = -3
Query:  210 GAFLFLADLVRNIH---------LPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVL 614
            G + F  DLV +I          + + VDFIR + Y +        +L  +    +  K+V++VEDI++TG T+++L++ L       V V +LL K +    Q         Y GFE P+ FVVGY +D+ E +R+L ++ V+
Sbjct:   76 GGYRFCTDLVEHIKNLSRNSERFISMRVDFIRLKCYCNDQCMDELQILGGEDLAKLSGKNVLIVEDIINTGRTMTALLSQLEKYKPKMVKVASLLVKRSASSNQYR-----PDYTGFEIPNKFVVGYALDYNEYFRDLHHICVI 214          
The following BLAST results are available for this feature:
BLAST of CN181670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
HPRT_MOUSE2.982e-1535.42Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_CANFA2.982e-1535.42Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_PANTR3.895e-1535.42Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_RAT5.087e-1535.42Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_MERUN5.087e-1535.42Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_MACFA5.087e-1535.42Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_HUMAN5.087e-1535.42Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_CRIGR5.087e-1534.72Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
PRDC1_HUMAN1.253e-1331.94Phosphoribosyltransferase domain-containing protei... [more]
PRDC1_XENTR2.363e-1231.25Phosphoribosyltransferase domain-containing protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001E24_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001E24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181670 ID=CN181670; Name=CN181670; organism=Citrus sinensis; type=EST; length=667bp
GAGGGTATATAACACCAATAACAATTTACCAAGCAAATGAAAAAACCATT
CATCTTATCAGGAGAGCCTATTAGAACTGCATTTATCATCAATTACCAAA
TGCCAAGAATCTGTAGAAGTTGCAAAGAGTCTGGATTTGTAGAATAAGTT
TATTGACCGCCCTGTCAAAGAGCCAGTGACGGATAAAATTATTTGTAGCA
TTCAGGCTTCAACACTCCAACATAAGGCAGGTTCCTATATAATTCAGCGA
AGTCCATTCCATAGCCCACAACGAAATAATCTGGACACTCAAATCCCCGA
TAGAACTTTCCTTCACCCACTAGCTCCACCTGAATCTTTCTTCTGGCTGG
TTTATCAAGGAGAGTGCAGACTGAGACAGAAGATGCTCCTTTGGATACCA
AGTTTGCAATAAGAGATGATAATGTGGTTCCTGTATCTACAATGTCCTCG
ACCAAGATTACGTGCTTGTCCTTAACATCGAGTTTCGAATCGAGGGAAAG
AACAGGGGCTCCACTGGAGAGAGTACCGGAGCCGTAGGATTCAGCACGAA
TGAAATCAACGGAGATAGGGAGGTGAATATTTCTGACCAGGTCAGCCAAG
AAGAGAAACGCTCCGGTGGCGACACCCACGACGACAGGCGGCGGGGAAAC
GGAGTTGAAATCGTGGG
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