CN181660

Overview
NameCN181660
Unique NameCN181660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length676
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181660 vs. ExPASy Swiss-Prot
Match: ALDOB_HUMAN (Fructose-bisphosphate aldolase B OS=Homo sapiens GN=ALDOB PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 5.204e-31
Identity = 72/137 (52.55%), Postives = 84/137 (61.31%), Query Frame = -3
Query:  267 LLKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 674
            LLKPNMVT G    K  TP+ +A  TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK  N +  Q AF+ R  AN +A  G Y      G  + +SL    Y Y
Sbjct:  228 LLKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAANKEATQEAFMKRAMANCQAAKGQYVHTGSSGAASTQSLFTACYTY 364          
BLAST of CN181660 vs. ExPASy Swiss-Prot
Match: ALDOB_PONAB (Fructose-bisphosphate aldolase B OS=Pongo abelii GN=ALDOB PE=2 SV=3)

HSP 1 Score: 134.035 bits (336), Expect = 6.797e-31
Identity = 72/137 (52.55%), Postives = 84/137 (61.31%), Query Frame = -3
Query:  267 LLKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 674
            LLKPNMVT G    K  TP+ +A  TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK  N +  Q AF+ R  AN +A  G Y      G  + +SL    Y Y
Sbjct:  228 LLKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAANKEATQEAFMKRAVANHQAAKGQYVHTGSSGAASTQSLFTACYTY 364          
BLAST of CN181660 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.159e-30
Identity = 70/124 (56.45%), Postives = 87/124 (70.16%), Query Frame = -3
Query:  306 LLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGE 674
            LLKP+MVTPG+E+  K +P  +AE+T+  L R +P AVP ++FLSGGQSE EAT NLNAMN  K+  PW +SFS+ RALQ + LK W G  ENV+ AQ A L R K+NS A LG Y GD +  E
Sbjct:  217 LLKPSMVTPGAESKDKASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN--KSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYIGDGESEE 338          
BLAST of CN181660 vs. ExPASy Swiss-Prot
Match: ALF_SCHMA (Fructose-bisphosphate aldolase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.978e-30
Identity = 74/139 (53.24%), Postives = 92/139 (66.19%), Query Frame = -3
Query:  267 LLKPNMVTPGSEAPKV-TPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGD--AQLGEGAAESLHVKDYKY 674
            LLKPNMVT G    K  TP   A  TVRALQRT+P AVP + FLSGGQSE +AT+NLN +N++   KPW+L+FSFGRALQ S L  W GK+ENV  AQ   L   KAN  A +G ++G+    LG+   +SL V ++ Y
Sbjct:  228 LLKPNMVTAGQACKKAYTPQENALATVRALQRTVPPAVPGITFLSGGQSELDATKNLNEINKIPGPKPWALTFSFGRALQASVLATWKGKKENVHAAQEELLKLAKANGAAAVGKFEGNMGTTLGD---KSLFVANHAY 363          
BLAST of CN181660 vs. ExPASy Swiss-Prot
Match: ALF2_PLABA (Fructose-bisphosphate aldolase 2 OS=Plasmodium berghei (strain Anka) GN=ALDO2 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.754e-30
Identity = 75/136 (55.15%), Postives = 91/136 (66.91%), Query Frame = -3
Query:  267 LKPNMVTPGSEAPKVTP-DVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 671
            LKPNMVT G +  + T  D I   TVR L+RT+P A+P V FLSGGQSEE+A+ NLN++N L    PW+L+FS+GRALQ S L  W GK+ENV KA+   L R +ANS AT G YKG A  G  A  SL+ K Y Y
Sbjct:  225 LKPNMVTAGYDCTEKTKTDDIGFFTVRTLRRTVPPALPGVAFLSGGQSEEDASINLNSINVLGPH-PWALTFSYGRALQASVLNTWQGKKENVAKARRVLLQRAEANSLATYGKYKGGAG-GSTAGASLYEKKYVY 358          
BLAST of CN181660 vs. ExPASy Swiss-Prot
Match: ALDOB_RAT (Fructose-bisphosphate aldolase B OS=Rattus norvegicus GN=Aldob PE=1 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 5.754e-30
Identity = 69/137 (50.36%), Postives = 85/137 (62.04%), Query Frame = -3
Query:  267 LLKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 674
            LLKPNM+T G    K  TP+ +A  TV AL RT+PAAVP++ FLSGG SEE+AT NLNA+ +    +PW LSFS+GRALQ S L AW GK  N +  Q AF+ R  AN +A  G Y      G  + +SL    Y Y
Sbjct:  228 LLKPNMLTAGHACTKKYTPEQVAMATVTALHRTVPAAVPSICFLSGGMSEEDATLNLNAIYRCPLPRPWKLSFSYGRALQASALAAWGGKAANKKATQEAFMKRAVANCQAAQGQYVHTGSSGAASTQSLFTASYTY 364          
BLAST of CN181660 vs. ExPASy Swiss-Prot
Match: ALDOC_CARAU (Fructose-bisphosphate aldolase C OS=Carassius auratus GN=aldoc PE=2 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.085e-28
Identity = 72/137 (52.55%), Postives = 87/137 (63.50%), Query Frame = -3
Query:  267 LLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 674
            LLKPNMVT G   P K +   IA  TV AL+RT+P AV  V FLSGGQSEEEA+ NLNA+N     KPW+L+FS+GRALQ S L AW G +EN + A   FL R +AN  A  G Y      G  A +SL+V ++ Y
Sbjct:  228 LLKPNMVTAGHSCPTKFSNQEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINNCPLTKPWALTFSYGRALQASALSAWRGVKENEKAATEEFLKRAEANGLAAQGKYVSSGMDG-SAGQSLYVANHAY 363          
BLAST of CN181660 vs. ExPASy Swiss-Prot
Match: ALDCB_DANRE (Fructose-bisphosphate aldolase C-B OS=Danio rerio GN=aldocb PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.386e-28
Identity = 69/137 (50.36%), Postives = 86/137 (62.77%), Query Frame = -3
Query:  267 LLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 674
            LLKPNMVT G   P K + + IA  TV AL+RT+P AV  V FLSGGQSEEEA+ NLN++N     KPW L+FS+GRALQ S L AW G + N + A   F+ R +AN  A  G Y      G  A +SL+V ++ Y
Sbjct:  228 LLKPNMVTAGHSCPTKYSSEEIAMATVTALRRTVPPAVSGVTFLSGGQSEEEASVNLNSINNCPLAKPWPLTFSYGRALQASALSAWRGAKSNEKAATEEFIKRAEANGLAAQGKYVSSGTCG-AAGQSLYVANHAY 363          
BLAST of CN181660 vs. ExPASy Swiss-Prot
Match: ALDCA_DANRE (Fructose-bisphosphate aldolase C-A OS=Danio rerio GN=aldoca PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.386e-28
Identity = 68/137 (49.64%), Postives = 85/137 (62.04%), Query Frame = -3
Query:  267 LLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 674
            LLKPNMVTPG   P K + + +A  TV AL+RT+P AV  V FLSGGQSEEEA+ NL+A+N  +  KPW+L+FSFGRALQ S LK W G+ EN   A   F+ R + NS A+ G Y            S ++  Y Y
Sbjct:  228 LLKPNMVTPGHGCPTKYSAEEVAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLSAINNCRLVKPWALTFSFGRALQASALKTWRGQRENEAAATEEFIKRAEINSLASQGKYTVCGDSSGATGLSHYLSSYAY 364          
BLAST of CN181660 vs. ExPASy Swiss-Prot
Match: ALF_LYMST (Fructose-bisphosphate aldolase (Fragment) OS=Lymnaea stagnalis PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.016e-26
Identity = 61/92 (66.30%), Postives = 70/92 (76.09%), Query Frame = -3
Query:  402 LLKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEE 674
            LLKPNMVT G   PK  TP+ IA  TV AL RT+PAAV  + FLSGGQSEE+AT NLNA+NQ   +KPW L+FS+GRALQ S LKAW GK+E
Sbjct:    9 LLKPNMVTAGQGCPKKYTPEDIARATVTALNRTVPAAVAGITFLSGGQSEEDATINLNAINQFPGRKPWPLTFSYGRALQASVLKAWGGKDE 100          
The following BLAST results are available for this feature:
BLAST of CN181660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALDOB_HUMAN5.204e-3152.55Fructose-bisphosphate aldolase B OS=Homo sapiens G... [more]
ALDOB_PONAB6.797e-3152.55Fructose-bisphosphate aldolase B OS=Pongo abelii G... [more]
ALFC2_PEA1.159e-3056.45Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALF_SCHMA1.978e-3053.24Fructose-bisphosphate aldolase OS=Schistosoma mans... [more]
ALF2_PLABA5.754e-3055.15Fructose-bisphosphate aldolase 2 OS=Plasmodium ber... [more]
ALDOB_RAT5.754e-3050.36Fructose-bisphosphate aldolase B OS=Rattus norvegi... [more]
ALDOC_CARAU1.085e-2852.55Fructose-bisphosphate aldolase C OS=Carassius aura... [more]
ALDCB_DANRE5.386e-2850.36Fructose-bisphosphate aldolase C-B OS=Danio rerio ... [more]
ALDCA_DANRE5.386e-2849.64Fructose-bisphosphate aldolase C-A OS=Danio rerio ... [more]
ALF_LYMST1.016e-2666.30Fructose-bisphosphate aldolase (Fragment) OS=Lymna... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0001E18_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001E18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181660 ID=CN181660; Name=CN181660; organism=Citrus sinensis; type=EST; length=676bp
GAGGCAATTATGTGACAAAATCACAGAAATTTAGTGCCATTAGGGGAAAG
GAAAAAAAAAGAAAAACAAAAACAAAAGCATAAACAGTTTTCAGTTTAGT
TTTGATCAAAACCACTCAAACCGAAGTTCCCAAGCTTTTTATTGCTCCAC
CTAAATATGAAAAAGCTCTAAAACTATGAATGAGAATGGGCCAACCTAAT
GTTCATACCGCCATTTACTCTCATAAAGTTCATAAAGCACAACACCCAAA
GCTTCAACTGTGCTTAGTATTTGTAGTCCTTGACATGGAGAGACTCTGCG
GCACCTTCACCAAGCTGGGCATCACCCTTGTAAGTACCGAGGGTAGCCTC
AGAGTTGGCCTTGCACCTGACAAGGAAAGCAGCCTGGGCCTTCTGCACAT
TCTCTTCCTTTCCAGCCCATGCCTTGAGAGTGCTCTGCTGAAGTGCACGT
CCAAAGGAGAAGGAAAGTGACCATGGCTTCTTCGTCTTGAGCTGGTTCAT
GGCATTAAGGTTGCGGGTAGCCTCCTCCTCACTCTGCCCACCAGACAAGA
ACACAACAGCAGGAACTGCTGCAGGCATAGTGCGTTGCAGGGCCCGGACA
GTGTGTTCAGCAATCACGTCCGGTGTAACTTTGGGAGCTTCAGATCCAGG
GGTCACCATGTTGGGCTTCAAAAGGG
back to top