CN181651
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181651 vs. ExPASy Swiss-Prot
Match: DHSA_RICPR (Succinate dehydrogenase flavoprotein subunit OS=Rickettsia prowazekii GN=sdhA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.011e-11 Identity = 53/171 (30.99%), Postives = 77/171 (45.03%), Query Frame = -2 Query: 191 VRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMH-NILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYLFEHG---WEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFP 691 V G+ GE AC +HGANRL SNSLL+ +VF R + + + K S ++ + + NIL ++R ++Q M +V + R+ L I E+ ++ W V EA E+ NL A + V SA AR ESRG H D+P Sbjct: 383 VNGIMAIGEAACVSVHGANRLGSNSLLDLVVFGRSSALKAAELIKPASPHKPLQKETLEKIINRFDKVRYANGNIL--VADLRLKMQRTMQSHVSVFRTQKLLDEGVGMISEIRNRYKDIKINDKSLIWNSDLV--EALELDNLLDQALVTVCSAAARKESRGAHAREDYP 549
BLAST of CN181651 vs. ExPASy Swiss-Prot
Match: DHSA_RICBR (Succinate dehydrogenase flavoprotein subunit OS=Rickettsia bellii (strain RML369-C) GN=sdhA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.011e-11 Identity = 56/173 (32.37%), Postives = 79/173 (45.66%), Query Frame = -2 Query: 191 VRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMH---NILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYLFEHG---WEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFP 691 V+GL GE AC +HGANRL SNSLL+ +VF R A + + K S S ++ S + H NI ++R ++Q M + + R+ L I E+ + ++ W V EA E+ NL A + V SA AR ESRG H D+P Sbjct: 383 VKGLMSIGEAACVSVHGANRLGSNSLLDLVVFGRSAALKAAELIKPASPHKPVSEEALEKII--SRFDKIRHSSGNI--SVADLRLKMQRTMQSHASVFRTQEVLDEGAEMISEIRSGYKDIKVNDKSLIWNSDLV--EALELDNLLDQALVTVYSAAARKESRGAHAREDYP 549
BLAST of CN181651 vs. ExPASy Swiss-Prot
Match: DHSA_RICTY (Succinate dehydrogenase flavoprotein subunit OS=Rickettsia typhi GN=sdhA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.136e-11 Identity = 53/173 (30.64%), Postives = 78/173 (45.09%), Query Frame = -2 Query: 191 VRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMH---NILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYLFEHG---WEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFP 691 V G+ GE AC +HGANRL SNSLL+ +VF R + + + K S ++ + + H N+L ++R ++Q M +V + R+ L I E+ ++ W V EA E+ NL A + V SA AR ESRG H D+P Sbjct: 383 VNGIMAIGEAACVSVHGANRLGSNSLLDLVVFGRSSALKAAELIKPVSPHKPLKKEILEKIINRF--DKIRHANGNVL--VADLRLQMQRTMQSHVSVFRTQELLDEGARMISEIRNRYKDIKINDKSLIWNSDLV--EALELDNLLDQALVTVYSAAARKESRGAHAREDYP 549
BLAST of CN181651 vs. ExPASy Swiss-Prot
Match: DHSA1_ARATH (Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial OS=Arabidopsis thaliana GN=SDH1-1 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.136e-11 Identity = 55/181 (30.39%), Postives = 85/181 (46.96%), Query Frame = -2 Query: 173 VRGLYVAGEVACTGLHGANRLASNSLLEALVFAR----RAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYLFEHGWEQTFVG----LEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFPHVEENK 691 + GL AGE AC +HGANRL +NSLL+ +VF R R + S +K ++ A +T+ N N T +R +Q IM + R+ +L+ ID+ WE++ +++ + +E E+ NL A + + SA AR ESRG H DF E+ + Sbjct: 422 IPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEISKPGEKQKPLEKDAGE---KTIAWLDRLRN--SNGSLPTSTIRLNMQRIMQNNAAVFRTQETLEEGCQLIDK---AWESFGDVQVKDRSMIWNSDLIETLELENLLINASITMHSAEARKESRGAHAREDFTKREDGE 594
BLAST of CN181651 vs. ExPASy Swiss-Prot
Match: DHSA_XENTR (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Xenopus tropicalis GN=sdha PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.708e-11 Identity = 53/170 (31.18%), Postives = 79/170 (46.47%), Query Frame = -2 Query: 194 VRGLYVAGEVACTGLHGANRLASNSLLEALVFARR-AVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETY-LFEHG--WEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDF 691 V GLY GE A +HGANRL +NSLL+ +VF R A+ + K + N +V +L N RT E+R +Q M + + R+ + L+ ++ + + + F+ G W V E E++NL CA + A AR ESRG H D+ Sbjct: 435 VPGLYACGEAASASVHGANRLGANSLLDLVVFGRACALSIAESCKPGEPVPSIKENAGEESVA--NLDKLRFTNGSTRTSELRINMQKTMQNHAAVFRTGSVLKEGCEKLSAINSTMDDIKTFDRGIVWNTDLV--ETLELQNLMLCALQTIYGAEARKESRGAHAREDY 600 The following BLAST results are available for this feature:
BLAST of CN181651 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181651 ID=CN181651; Name=CN181651; organism=Citrus sinensis; type=EST; length=719bpback to top |