CN181646
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_ACISJ (Ribosome-recycling factor OS=Acidovorax sp. (strain JS42) GN=frr PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.269e-13 Identity = 37/86 (43.02%), Postives = 59/86 (68.60%), Query Frame = 1 Query: 466 VKETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGLN 723 +K+T ++M+ +I A L K+RTGRA+P +LD I VE G +PL+ +A V++LD++T+S+ P++ N ++E AI S LGLN Sbjct: 6 IKKTTEAKMDQSIAAFKNNLAKIRTGRANPQLLDTIHVEYYGSMVPLSQVANVALLDARTISVQPWEKNMGAKIEKAIRESDLGLN 91
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_SALPK (Ribosome-recycling factor OS=Salmonella paratyphi A (strain AKU_12601) GN=frr PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.576e-13 Identity = 39/86 (45.35%), Postives = 57/86 (66.28%), Query Frame = 1 Query: 466 VKETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGLN 723 +++ A +ME + A +++K+RTGRASP +LD I+VE G PL LA V+V DS+TL IN +D + +E AI++S LGLN Sbjct: 5 IRKDAEVRMEKCVEAFKTQISKVRTGRASPSLLDGIVVEYYGTLTPLRQLASVTVEDSRTLKINVFDRSMGPAVEKAIMASDLGLN 90
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_SALPA (Ribosome-recycling factor OS=Salmonella paratyphi A GN=frr PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.576e-13 Identity = 39/86 (45.35%), Postives = 57/86 (66.28%), Query Frame = 1 Query: 466 VKETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGLN 723 +++ A +ME + A +++K+RTGRASP +LD I+VE G PL LA V+V DS+TL IN +D + +E AI++S LGLN Sbjct: 5 IRKDAEVRMEKCVEAFKTQISKVRTGRASPSLLDGIVVEYYGTLTPLRQLASVTVEDSRTLKINVFDRSMGPAVEKAIMASDLGLN 90
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_PHOLL (Ribosome-recycling factor OS=Photorhabdus luminescens subsp. laumondii GN=frr PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.576e-13 Identity = 39/86 (45.35%), Postives = 56/86 (65.12%), Query Frame = 1 Query: 466 VKETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGLN 723 +K+ A +ME ++ AL +++K+RTGRASP +LD IIVE G PL LA V D++TL+I +D +E AI++S LGLN Sbjct: 5 IKKDAQDRMEKSVEALKNQISKVRTGRASPSLLDGIIVEYYGAPTPLRQLANVIAEDARTLAITVFDRTMTPAIEKAIMASDLGLN 90
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_METFK (Ribosome-recycling factor OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=frr PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.576e-13 Identity = 38/86 (44.19%), Postives = 58/86 (67.44%), Query Frame = 1 Query: 466 VKETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGLN 723 VK TA +M+ +I AL +L+K+RTGRA G+LDH+ VE G + +N +A VS+ D++TL++ Y+ N ++E AI + LGLN Sbjct: 5 VKNTAEQKMQKSIEALKADLSKVRTGRAHTGLLDHVQVEYYGSMVAINQVASVSLGDARTLNVQAYEKNMTPKVEKAIRDADLGLN 90
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_ENT38 (Ribosome-recycling factor OS=Enterobacter sp. (strain 638) GN=frr PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.576e-13 Identity = 39/86 (45.35%), Postives = 57/86 (66.28%), Query Frame = 1 Query: 466 VKETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGLN 723 +++ A +ME + A +++K+RTGRASP +LD IIVE G PL LA V+V D++TL IN +D + +E AI++S LGLN Sbjct: 5 IRKDAEVRMEKCVEAFKNQISKVRTGRASPSLLDGIIVEYYGTPTPLRQLASVTVEDTRTLKINVFDRSLGPAVEKAIMASDLGLN 90
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_DEHE1 (Ribosome-recycling factor OS=Dehalococcoides ethenogenes (strain 195) GN=frr PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.576e-13 Identity = 35/85 (41.18%), Postives = 58/85 (68.24%), Query Frame = 1 Query: 466 VKETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGL 720 + + + +M A++ LS+EL+ +RTGR+SP +++HI VE GV P+NHLA ++ D + ++I P+D + L +E AI+ S LGL Sbjct: 5 ILQKSEKKMAASLDVLSQELSGIRTGRSSPALVEHIKVEYAGVPTPINHLASIAAPDPRYITIQPWDRSCLSAIEKAIMKSDLGL 89
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_POLSJ (Ribosome-recycling factor OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=frr PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.282e-13 Identity = 35/86 (40.70%), Postives = 60/86 (69.77%), Query Frame = 1 Query: 466 VKETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGLN 723 VK+ A +M+ ++ + LTK+RTGRA+PG+LD + V+ G +P++ +A VS+LD++T+S++P++ ++E AI S LGLN Sbjct: 6 VKQNAEQKMQQSVDSFKNSLTKIRTGRANPGLLDTVHVDYYGSMVPISQVANVSLLDARTISVSPWEKGMGAKIEKAIRDSDLGLN 91
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_LEUCK (Ribosome-recycling factor OS=Leuconostoc citreum (strain KM20) GN=frr PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.282e-13 Identity = 41/82 (50.00%), Postives = 54/82 (65.85%), Query Frame = 1 Query: 478 AVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGLN 723 A S+M+ A AL RELT +RTGRA+P +LD I VE G PLN +A +SV +++ L I P+D L+E+ AI S LGLN Sbjct: 8 AKSRMQGAQDALQRELTSIRTGRANPHILDRIEVEYYGAMTPLNQVASISVPEARVLLITPFDKTALEEIIRAINMSDLGLN 89
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_CHRVO (Ribosome-recycling factor OS=Chromobacterium violaceum GN=frr PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.282e-13 Identity = 33/86 (38.37%), Postives = 59/86 (68.60%), Query Frame = 1 Query: 466 VKETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGLN 723 +K++A +M+ + A +L K+RTGRA G+LDH++V+ G +P+N +A V+++D++T+ + P++ L ++E AI S LGLN Sbjct: 5 IKKSAEQKMQKTLEAFKNDLAKVRTGRAHTGILDHVMVDYYGSDVPVNQVANVTLIDARTIGVQPWEKPMLAKIEKAIRDSDLGLN 90 The following BLAST results are available for this feature:
BLAST of CN181646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 303
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181646 ID=CN181646; Name=CN181646; organism=Citrus sinensis; type=EST; length=723bpback to top |