CN181646
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_ACIAC (Ribosome-recycling factor OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=frr PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12 Identity = 35/86 (40.70%), Postives = 58/86 (67.44%), Query Frame = 1 Query: 466 VKETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGLN 723 +K+ ++M+ +IVA L K+RTGRA+P +LD + VE G +PL+ +A VS++D++T+S+ P++ ++E AI S LGLN Sbjct: 6 IKKNTEAKMDQSIVAFKNNLAKIRTGRANPALLDSVQVEYYGSMVPLSQVANVSLIDARTISVQPWEKGMGAKIEKAIRESELGLN 91
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_PSEE4 (Ribosome-recycling factor OS=Pseudomonas entomophila (strain L48) GN=frr PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.622e-12 Identity = 38/86 (44.19%), Postives = 54/86 (62.79%), Query Frame = 1 Query: 466 VKETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGLN 723 +K+ A +M +I AL R L +RTGRA P +LD + V G MPLN +A ++V D++TL I +D N +E AI++S LGLN Sbjct: 5 IKKDAQERMGKSIEALGRNLASIRTGRAHPSILDSVKVPAWGSDMPLNQVAAITVEDARTLKIVAHDKNLSAAIEKAILTSDLGLN 90
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_POLNA (Ribosome-recycling factor OS=Polaromonas naphthalenivorans (strain CJ2) GN=frr PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.622e-12 Identity = 33/86 (38.37%), Postives = 60/86 (69.77%), Query Frame = 1 Query: 466 VKETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGLN 723 +K+ A +M+ ++ + LTK+RTGRA+PG+LD + V+ G +P++ +A V++LD++T+S++P++ ++E AI S LGLN Sbjct: 6 IKQQATQKMQQSLESFQHNLTKIRTGRANPGLLDTVHVDYYGSMVPISQVANVALLDARTISVSPWEKGMGAKIEKAIRDSDLGLN 91
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_METCA (Ribosome-recycling factor OS=Methylococcus capsulatus GN=frr PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.622e-12 Identity = 34/86 (39.53%), Postives = 59/86 (68.60%), Query Frame = 1 Query: 466 VKETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGLN 723 +++ +M+ +I AL E K+RTGRA P +L+HI V G ++PL +A V+V D+++L++ P++ N ++ +E AI++S LGLN Sbjct: 5 IQKRTAERMQKSIEALKHEFAKIRTGRAHPSLLEHIRVSYYGNEVPLTQVANVAVEDARSLAVTPWERNMVQAIEKAIMTSDLGLN 90
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_GEOSW (Ribosome-recycling factor OS=Geobacillus sp. (strain WCH70) GN=frr PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.622e-12 Identity = 35/82 (42.68%), Postives = 56/82 (68.29%), Query Frame = 1 Query: 475 TAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGL 720 TA +M+ A+ A +REL +R GRA+P +L+ + V+ G+ P+ LA +SV +++ L I PYD + +K++E AI+SS LGL Sbjct: 8 TAKEKMDKAVQAFTRELATIRAGRANPSLLEKVTVDYYGMPTPIIQLASISVPEARLLVIQPYDKSVIKDIEKAILSSDLGL 89
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_DESVV (Ribosome-recycling factor OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=frr PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.622e-12 Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 1 Query: 478 AVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGLN 723 A +ME AI AL RE ++LRTGRAS ++D I V+ G P++ +A V+V DS+ ++I P+D N +E AI+ S LGLN Sbjct: 10 AEERMEKAIAALEREFSRLRTGRASASLVDGIKVDYYGTPTPISQVASVAVPDSRCITIQPWDRNAFSLIEKAILKSDLGLN 91
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_DESVH (Ribosome-recycling factor OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=frr PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.622e-12 Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 1 Query: 478 AVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGLN 723 A +ME AI AL RE ++LRTGRAS ++D I V+ G P++ +A V+V DS+ ++I P+D N +E AI+ S LGLN Sbjct: 10 AEERMEKAIAALEREFSRLRTGRASASLVDGIKVDYYGTPTPISQVASVAVPDSRCITIQPWDRNAFSLIEKAILKSDLGLN 91
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_THEM4 (Ribosome-recycling factor OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=frr PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.119e-12 Identity = 38/88 (43.18%), Postives = 58/88 (65.91%), Query Frame = 1 Query: 460 PTVKETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGLN 723 P VK+T +M+ ++ ++ EL KLRTGR SP +L+ I V+ GV P+N +A V+V + ++L I P++ N L +E AI +S LGLN Sbjct: 4 PIVKKTE-EKMKKSVNSIDEELKKLRTGRPSPALLEEIKVDYYGVPTPINQVATVNVTEERSLIIKPWEKNLLNAVEKAIQASDLGLN 90
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_THEAB (Ribosome-recycling factor OS=Thermosipho africanus (strain TCF52B) GN=frr PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.119e-12 Identity = 36/88 (40.91%), Postives = 58/88 (65.91%), Query Frame = 1 Query: 460 PTVKETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGLN 723 P +KE + +M+ ++ A+ EL KLRTGR SP +L+ I ++ GV P+N +A ++V + ++L I P++ N L +E AI +S LGLN Sbjct: 4 PILKEAEL-RMKKSVEAIDEELKKLRTGRPSPALLEEIKIDYYGVPTPINQVATINVTEERSLIIKPWEKNLLSAIEKAIQASDLGLN 90
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_PSEPG (Ribosome-recycling factor OS=Pseudomonas putida (strain GB-1) GN=frr PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.119e-12 Identity = 37/86 (43.02%), Postives = 55/86 (63.95%), Query Frame = 1 Query: 466 VKETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGLN 723 +K+ A +M ++ AL R L +RTGRA P +LD + V G +MPLN +A ++V D++TL I +D N +E AI++S LGLN Sbjct: 5 IKKDAQERMTKSLEALGRNLAAIRTGRAHPSILDTVKVTAWGSEMPLNQVAAITVEDARTLKIVAHDKNLSAAIEKAILTSDLGLN 90 The following BLAST results are available for this feature:
BLAST of CN181646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 303
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181646 ID=CN181646; Name=CN181646; organism=Citrus sinensis; type=EST; length=723bpback to top |