CN181646
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_PROMH (Ribosome-recycling factor OS=Proteus mirabilis (strain HI4320) GN=frr PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.119e-12 Identity = 37/86 (43.02%), Postives = 55/86 (63.95%), Query Frame = 1 Query: 466 VKETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGLN 723 +K+ A +M+ ++ AL ++ K+RTGRASP +LD I+VE G PLN +A V D +TL+I +D +E AI++S LGLN Sbjct: 5 IKKDAQERMDKSVEALKSQINKVRTGRASPNLLDGIVVEYYGAPTPLNQVANVVAEDGRTLAITVFDRTLAPAVEKAIMASDLGLN 90
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_DESAA (Ribosome-recycling factor OS=Desulfatibacillum alkenivorans (strain AK-01) GN=frr PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.119e-12 Identity = 36/86 (41.86%), Postives = 57/86 (66.28%), Query Frame = 1 Query: 466 VKETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGLN 723 V E A +M+ AI AL + L ++RTGRAS MLD + ++ G P+N A V++ +S+ ++I P+D + +K++E AI+ S LGLN Sbjct: 5 VYEEAREKMDKAIAALEKGLLRVRTGRASLSMLDGVKLDYYGTPTPINQAATVAIPESRLITIQPWDASVIKDIEKAILKSDLGLN 90
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_COLP3 (Ribosome-recycling factor OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=frr PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.119e-12 Identity = 39/84 (46.43%), Postives = 54/84 (64.29%), Query Frame = 1 Query: 472 ETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGLN 723 E A +M +I AL LTK+RTGRA +LD+I+VE G+ PLN + VSV D++ LSI +D + + +E AI+ S LGLN Sbjct: 7 EDAQDRMGKSIEALKTSLTKIRTGRAHASLLDNIVVEYYGMDTPLNQVGNVSVPDARNLSITVFDKSMISAVEKAIMKSDLGLN 90
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_PSEMY (Ribosome-recycling factor OS=Pseudomonas mendocina (strain ymp) GN=frr PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.767e-12 Identity = 37/86 (43.02%), Postives = 54/86 (62.79%), Query Frame = 1 Query: 466 VKETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGLN 723 +K+ A +M ++ AL R L +RTGRA P +LD + V G MPLN +A ++V D++TL I +D N +E AI++S LGLN Sbjct: 5 IKKDAQERMGKSLEALDRNLASIRTGRAHPSILDSVKVPAWGSDMPLNQVAAITVEDARTLKIVAHDKNLSAAIEKAIMTSDLGLN 90
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_DELAS (Ribosome-recycling factor OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=frr PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.767e-12 Identity = 36/86 (41.86%), Postives = 59/86 (68.60%), Query Frame = 1 Query: 466 VKETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGLN 723 +K+T S+M +I AL L ++RTGRA+P +LD I V+ G +PL+ +A V++LD++T+S+ P++ + ++E AI S LGLN Sbjct: 6 IKKTTESKMGQSIEALKNNLARVRTGRANPSLLDSIHVDYYGSMVPLSQVANVNLLDARTISVQPWEKSMSAKVEKAIRESDLGLN 91
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_CLOBM (Ribosome-recycling factor OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=frr PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.767e-12 Identity = 38/86 (44.19%), Postives = 55/86 (63.95%), Query Frame = 1 Query: 466 VKETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGLN 723 + + A +M +IVAL REL ++ GRA+P MLD I E G PLN LA +SV +++ L I P+D +++ +E AI+ S LGLN Sbjct: 5 ILKKADEKMGKSIVALKRELASMKAGRANPAMLDRIDAEYYGSMTPLNQLANISVPEARVLLIQPWDKSSMGAIEKAILKSDLGLN 90
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_CHLSY (Ribosome-recycling factor OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=frr PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.767e-12 Identity = 36/80 (45.00%), Postives = 51/80 (63.75%), Query Frame = 1 Query: 484 SQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGLN 723 + ++ A AL L +RTGRAS +++H+ VE G+ MPLN LA +SV + + + I PYD N +K +E AI S LGLN Sbjct: 11 AHLKKATEALRHHLASIRTGRASSALVEHLHVEAYGMTMPLNQLANISVPEPRLIVIQPYDANMIKAIEKAIQQSDLGLN 90
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_CHLAA (Ribosome-recycling factor OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=frr PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.767e-12 Identity = 36/80 (45.00%), Postives = 51/80 (63.75%), Query Frame = 1 Query: 484 SQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGLN 723 + ++ A AL L +RTGRAS +++H+ VE G+ MPLN LA +SV + + + I PYD N +K +E AI S LGLN Sbjct: 11 AHLKKATEALRHHLASIRTGRASSALVEHLHVEAYGMTMPLNQLANISVPEPRLIVIQPYDANMIKAIEKAIQQSDLGLN 90
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_XANCP (Ribosome-recycling factor OS=Xanthomonas campestris pv. campestris GN=frr PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.614e-12 Identity = 37/85 (43.53%), Postives = 57/85 (67.06%), Query Frame = 1 Query: 466 VKETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGL 720 +K+ A ++M +I AL LT +RTGRASP +LD+I V+ G PLN +A +SV + ++L I+ +D +K++E AI +S LGL Sbjct: 5 IKQDAQTRMTKSIDALRHSLTTVRTGRASPALLDNIKVKAYGTDTPLNQVASISVSEGRSLVISLFDKGMIKDVEKAIYASDLGL 89
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_XANCB (Ribosome-recycling factor OS=Xanthomonas campestris pv. campestris (strain B100) GN=frr PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.614e-12 Identity = 37/85 (43.53%), Postives = 57/85 (67.06%), Query Frame = 1 Query: 466 VKETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGL 720 +K+ A ++M +I AL LT +RTGRASP +LD+I V+ G PLN +A +SV + ++L I+ +D +K++E AI +S LGL Sbjct: 5 IKQDAQTRMTKSIDALRHSLTTVRTGRASPALLDNIKVKAYGTDTPLNQVASISVSEGRSLVISLFDKGMIKDVEKAIYASDLGL 89 The following BLAST results are available for this feature:
BLAST of CN181646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 303
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181646 ID=CN181646; Name=CN181646; organism=Citrus sinensis; type=EST; length=723bpback to top |