CN181640

Overview
NameCN181640
Unique NameCN181640
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6950 contig Csv1_Contig6950:149..862. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: BACC_BACAM (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus amyloliquefaciens GN=bacC PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.601e-19
Identity = 69/204 (33.82%), Postives = 100/204 (49.02%), Query Frame = 2
Query:   83 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENA-KFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSLTP--YKSKGIRINVLCPEFVETELALKA 685
            +  +TGGASGIG A   A   +   V V D+ E +G+   A++ KEN  + H         F++ D+TN      A    V  +GGLD+ IN+AGI    P HE +      W   L+VNL  +   ++ A+  M  + K G IIN  S  G+  +   P Y+ASKGGV+       P       IR+N +CP  ++T L  K+
Sbjct:    7 TVLITGGASGIGYAAVQAFLNQQANVVVADIDEAQGE---AMIRKENNDRLH---------FVQTDITNEPACQNAILSAVDKFGGLDVLINNAGIEIVAPIHEMELS---DWNKVLNVNLTGMFLMSKHALKYMLKSGK-GNIINTCSVGGVVAWPDIPAYNASKGGVLQTDAFYRPSIIAKHNIRVNCVCPGIIDTPLNEKS 194          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: MOMAS_ORYSJ (Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.281e-18
Identity = 68/204 (33.33%), Postives = 96/204 (47.06%), Query Frame = 2
Query:   77 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSLTPYKSK-GIRINVLCPEFVETELALKA 685
            G  A +TGGASGIG   +      G  V V D+ +E G  + A            LG  ++ ++ CDVTN  D AAA +  VA +G LD+  N+AG+S P  F   +      +   L VNLV     T+ A  +M  A++ G II+  S +          Y+ SK  +V FT +      + GIR+N + P  V T LA  A
Sbjct:   17 GKVAVITGGASGIGACTARLFVKHGARVVVADIQDELGASLVA-----------ELGPDASSYVHCDVTNEGDVAAAVDHAVARFGKLDVMFNNAGVSGPPCFRMSECT-KEDFERVLAVNLVGPFLGTKHAARVMAPARR-GSIISTASLSSSVSGAASHAYTTSKHALVGFTENAAGELGRHGIRVNCVSPAGVATPLARAA 207          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: FABG_CUPLA (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Cuphea lanceolata GN=CLKR27 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.281e-18
Identity = 67/203 (33.00%), Postives = 100/203 (49.26%), Query Frame = 2
Query:   92 VTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSLT-PYKSKGIRINVLCPEFVETELALKAGSPI 697
            VTG + GIG+A++L+L   G  V V   +  +  + A  V KE   F        A+    DV+   D  A  +  V  +G +DI +N+AGI+        +      W+  +D+NL  V  CTQ A  IM   KK G IIN+ S  GL        YSA+K GV+ FT+++   Y S+ I +N + P F+ +++  K G  I
Sbjct:   82 VTGASRGIGKAIALSLGKAGCKVLV---NYARSSKEAEEVSKEIEAFGGQ-----ALTFGGDVSKEEDVEAMIKTAVDAWGTVDILVNNAGITRDGLLMRMKKS---QWQEVIDLNLTGVFLCTQAAAKIMMKKKK-GRIINIASVVGLVGNAGQANYSAAKAGVIGFTKTVAREYASRNINVNAVAPGFISSDMTSKLGDDI 272          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: DHG4_BACME (Glucose 1-dehydrogenase 4 OS=Bacillus megaterium GN=gdhIV PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.510e-18
Identity = 62/204 (30.39%), Postives = 100/204 (49.02%), Query Frame = 2
Query:   92 VTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSLT-PYKSKGIRINVLCPEFVETEL-ALKAGSPI 697
            +TGG++G+GRA+++    +   V +   + E+        E  +AK         A+ ++ DVT   D     +  +  +G LD+ IN+AG+ NP+P HE   D   +W   +D NL      +++AI         G +INM S   + P+     Y+ASKGG+ L T +L   Y  KGIR+N + P  + T + A K   P+
Sbjct:   12 ITGGSTGLGRAMAVRFGQEEAKVVINYYNNEE--------EALDAKKEVEEAGGQAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLD---NWNKVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPINAEKFADPV 204          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: DHR11_CHICK (Dehydrogenase/reductase SDR family member 11 OS=Gallus gallus GN=DHRS11 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.622e-17
Identity = 69/214 (32.24%), Postives = 105/214 (49.07%), Query Frame = 2
Query:   62 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMF-IRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAK-KPGVIINMGSSAG--LYPFYTDPIYSASKGGVVLFTRSLTPYKSKG---IRINVLCPEFVETELALK 682
            ME   G  A VTG + GIG A++ AL   G+ V     S +K +++AA  +        + G+P  +   +CD++N  +  + F      + G+D+CIN+AG++ P P    +T+G   WR  +DVN++AV  CT++A   M+      G IIN+ S  G  + P      YSA+K  V   T  L     +    IR   + P  VET  A K
Sbjct:    1 MERWTGRVALVTGASVGIGAAVARALVQHGMKVVGCARSVDKIEKLAAECQ--------SAGYPGTLIPYKCDLSNEEEILSMFSAIKTLHQGVDVCINNAGLARPEPLLSGKTEG---WRTMIDVNVMAVSICTREAYQSMKERNIDDGHIININSMNGHSVVPQSVVHFYSATKYAVTALTEGLRQELREAKTHIRATCISPGLVETGFAFK 203          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: DHGA_BACME (Glucose 1-dehydrogenase A OS=Bacillus megaterium GN=gdhA PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.622e-17
Identity = 59/195 (30.26%), Postives = 96/195 (49.23%), Query Frame = 2
Query:   92 VTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSLT-PYKSKGIRINVLCPEFVETEL 673
            +TGG++G+GRA+++    +   V +   + E+        E  +AK         A+ ++ DVT   D     +  +  +G LD+ IN+AG+ NP+P HE   D   +W   +D NL      +++AI         G +INM S   + P+     Y+ASKGG+ L T +L   Y  KGIR+N + P  + T +
Sbjct:   12 ITGGSTGLGRAMAVRFGQEEAKVVINYYNNEE--------EALDAKKEVEEAGGQAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLD---NWNKVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPI 195          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: DHG3_BACME (Glucose 1-dehydrogenase 3 OS=Bacillus megaterium GN=gdhIII PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.720e-17
Identity = 61/204 (29.90%), Postives = 99/204 (48.53%), Query Frame = 2
Query:   92 VTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSLT-PYKSKGIRINVLCPEFVETEL-ALKAGSPI 697
            +TGG++G+GRA+++    +   V +   + E+        E  +AK         A+ ++ DVT   D     +  +  +G LD+ IN+AG+ NP+P HE   D   +W   +D NL      +++AI         G +INM S   + P+     Y+ASKGG+   T +L   Y  KGIR+N + P  + T + A K   P+
Sbjct:   12 ITGGSTGLGRAMAVRFGQEEAKVVINYYNNEE--------EALDAKKEVEEAGGQAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLD---NWNKVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKQMTETLALEYAPKGIRVNNIGPGAMNTPINAEKFADPV 204          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: FABG_ARATH (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Arabidopsis thaliana GN=At1g24360 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 6.164e-17
Identity = 64/204 (31.37%), Postives = 104/204 (50.98%), Query Frame = 2
Query:   92 VTGGASGIGRALSLALAGKGVFVTV-VDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNP---IPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSLT-PYKSKGIRINVLCPEFVETELALKAG 688
            +TG + GIG+A++LAL   G  V V    S ++ +EVA  +E+   +         A+    DV+   D  A  +  +  +G +D+ +N+AGI+     I   + Q      W   + +NL  V  CTQ A+ IM   KK G IIN+ S  GL        Y+A+KGGV+ F+++      S+ I +NV+CP F+ +++  + G
Sbjct:   81 ITGASRGIGKAIALALGKAGCKVLVNYARSAKEAEEVAKQIEEYGGQ---------AITFGGDVSKATDVDAMMKTALDKWGTIDVVVNNAGITRDTLLIRMKQSQ------WDEVIALNLTGVFLCTQAAVKIMMK-KKRGRIINISSVVGLIGNIGQANYAAAKGGVISFSKTAAREGASRNINVNVVCPGFIASDMTAELG 268          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: LINX_PSEPA (2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase OS=Pseudomonas paucimobilis GN=linX PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.373e-16
Identity = 62/200 (31.00%), Postives = 97/200 (48.50%), Query Frame = 2
Query:   77 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSLT-PYKSKGIRINVLCPEFVETEL 673
            G  A +TGGASG+G A +   A +G  V + DL+EE  K V A +               A+FIR DVT+      A    V  +GGL    N+AGI +P  F E+  +G   W   + VN  A+    + AI  +  +   G IIN+ S  G++P   +  Y A+K  V + +++    +  +G+R+N + P  + T +
Sbjct:    7 GKVALITGGASGLGAAQAKRFAEEGAKVVIGDLNEEMAKGVVAEIRAAGG---------DALFIRLDVTDAASWNNAIAAAVDGFGGLTTLSNTAGIIHPGGFEEESIEG---WNKMVAVNQTAIFLGIKAAIPELVKSGN-GSIINISSLIGMFPTAGNASYCATKAAVRIMSKAAALEFVDRGVRVNTIVPGGMNTPI 193          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: LINC_PSEPA (2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase OS=Pseudomonas paucimobilis GN=linC PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.995e-16
Identity = 64/205 (31.22%), Postives = 91/205 (44.39%), Query Frame = 2
Query:   77 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNP-IPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTR-SLTPYKSKGIRINVLCPEFVETELALKA 685
            G +  VTGG SGIGRA    L   G  V V D+++E G+ V A                 A + RCD+    D  A   + +A +GGLD   N+A I    +P  E   +    +R ++D+N+     C +  I  M      G I+N  S+AG+        Y  +K  VV  TR +   Y   GIR+N L P  V T +  +A
Sbjct:    6 GKTIIVTGGGSGIGRATVELLVASGANVPVADINDEAGEAVVA------------TSGGKAAYFRCDIAQEEDVKALVAQTLAAFGGLDGSFNNAAIPQAGLPLAEVSLE---RFRQSMDINVTGTFLCMKYQILAMIERGTKGSIVNTASAAGVVGVPMHGEYVGAKHAVVGLTRVAAADYGKHGIRVNALVPGAVRTPMLQRA 195          
The following BLAST results are available for this feature:
BLAST of CN181640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
BACC_BACAM8.601e-1933.82Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
MOMAS_ORYSJ7.281e-1833.33Momilactone A synthase OS=Oryza sativa subsp. japo... [more]
FABG_CUPLA7.281e-1833.003-oxoacyl-[acyl-carrier-protein] reductase, chloro... [more]
DHG4_BACME9.510e-1830.39Glucose 1-dehydrogenase 4 OS=Bacillus megaterium G... [more]
DHR11_CHICK1.622e-1732.24Dehydrogenase/reductase SDR family member 11 OS=Ga... [more]
DHGA_BACME1.622e-1730.26Glucose 1-dehydrogenase A OS=Bacillus megaterium G... [more]
DHG3_BACME4.720e-1729.90Glucose 1-dehydrogenase 3 OS=Bacillus megaterium G... [more]
FABG_ARATH6.164e-1731.373-oxoacyl-[acyl-carrier-protein] reductase, chloro... [more]
LINX_PSEPA1.373e-1631.002,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydroge... [more]
LINC_PSEPA3.995e-1631.222,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydroge... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001E05_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181640 ID=CN181640; Name=CN181640; organism=Citrus sinensis; type=EST; length=714bp
GAGGAAAACTCTTAACCGAGTAGTTTAATCGCTTCCCTTTGCCTCTCTGT
TTGTTCATAAAATGGAGCTCAAACCGGGCTTATCAGCTTTTGTCACCGGC
GGTGCATCTGGGATTGGTAGAGCTTTGAGCCTAGCTCTTGCAGGGAAGGG
AGTCTTTGTGACAGTTGTTGATCTCTCTGAAGAAAAGGGAAAGGAAGTTG
CAGCGCTTGTTGAAAAAGAGAATGCCAAGTTTCATTCAAACTTAGGATTT
CCATCTGCTATGTTTATAAGATGTGATGTGACCAACACAAGGGATACAGC
TGCTGCTTTTGAGAAGCACGTAGCTACATATGGAGGATTGGATATATGTA
TCAACAGTGCTGGCATAAGTAATCCCATTCCATTCCACGAGGATCAAACT
GATGGCACACGTTCATGGAGATTCACTCTTGATGTGAACTTGGTTGCAGT
TATTGATTGCACTCAGAAAGCGATTGGAATTATGCAAGCTGCAAAAAAGC
CTGGAGTGATTATAAATATGGGATCTTCTGCAGGACTTTATCCATTTTAC
ACAGATCCAATCTACTCTGCTTCCAAAGGTGGTGTTGTTTTATTTACTAG
ATCACTTACTCCCTACAAAAGCAAGGGAATTCGCATCAACGTGCTTTGCC
CTGAGTTTGTTGAAACTGAGTTGGCCTTAAAGGCGGGCTCCCCAATAATT
GATCTGATGGGGGG
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