CN181640

Overview
NameCN181640
Unique NameCN181640
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6950 contig Csv1_Contig6950:149..862. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: DHB12_ANAPL (Estradiol 17-beta-dehydrogenase 12 OS=Anas platyrhynchos GN=HSD17B12 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.518e-15
Identity = 70/219 (31.96%), Postives = 118/219 (53.88%), Query Frame = 2
Query:   68 LKPGLSAF--VTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDI--CINSAGISNPIP-FHEDQTDGTRSWRFTLDVNLVAVIDCTQKAI-GIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSL-TPYKSKGIRINVLCPEFVETELALKAGSPIID 703
            L PGL A+  VTG   GIG+A +  LA +G+ V ++  S+EK  +VA  + ++        G  + + +  D     D    +++  A   GL+I   +N+ GIS   P +  D  D  ++    +++N+++V   T+  + G+++ +K  GVI+N+ S+AG+YP     +YSASK  V  F+R L   YKSKGI +  + P +V T+++ K   P  D
Sbjct:   43 LGPGLGAWAVVTGATDGIGKAYAKELAKRGMKVALISRSKEKLDQVAGEITEQ-------YGVETKVIV-ADFGEREDI---YDRIRAGLEGLEIGVLVNNVGISYSYPEYFIDVPDLDKTIDKMININIMSVCKMTRLVLPGMLERSK--GVILNISSAAGMYPTPLLTLYSASKAFVDYFSRGLHAEYKSKGIIVQSVMPYYVATKMS-KISKPSFD 247          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: LIMC_RHOER ((-)-trans-carveol dehydrogenase OS=Rhodococcus erythropolis GN=limC PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.983e-15
Identity = 72/214 (33.64%), Postives = 108/214 (50.47%), Query Frame = 2
Query:   77 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK---GKEVAALVE-KENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPF-HEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRS----LTPYKSKGIRINVLCPEFVETELALKAGS 691
            G  A +TG A G GR+ ++ LA +G  V +VD+  +    G  +    E  + AK   NLG   A+ I  DV +     A  ++ V+T G LDI   +AGI++ +PF   D  D T  WR  +D+NL  V    + A+  + A ++ G I+   S+AGL  +     YSA+K GVV   RS    L P++   +R+N L P  V T +    G+
Sbjct:    6 GQVALITGAARGQGRSHAIKLAEEGADVILVDVPNDVVDIGYPLGTADELDQTAKDVENLG-RKAIVIHADVRDLESLTAEVDRAVSTLGRLDIVSANAGIAS-VPFLSHDIPDNT--WRQMIDINLTGVWHTAKVAVPHILAGERGGSIVLTSSAAGLKGYAQISHYSAAKHGVVGLMRSLALELAPHR---VRVNSLHPTQVNTPMIQNEGT 212          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: HCD2_DROME (3-hydroxyacyl-CoA dehydrogenase type-2 OS=Drosophila melanogaster GN=scu PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.983e-15
Identity = 62/205 (30.24%), Postives = 98/205 (47.80%), Query Frame = 2
Query:   86 AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIP---FHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAK-----KPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSLT-PYKSKGIRINVLCPEFVETEL 673
            + VTGGASG+GRA +  LA +G  V + DL   KG EVA             LG    +F+  DVT+ +D +AA +     +G LD+ +N AG +  +    F+++       ++  +++N V   +  + + G+M A +     + GVI+N  S A          YSASK  VV  T  +     ++GIRI  + P    T +
Sbjct:    7 SLVTGGASGLGRATAERLAKQGASVILADLPSSKGNEVA-----------KELG-DKVVFVPVDVTSEKDVSAALQTAKDKFGRLDLTVNCAGTATAVKTFNFNKNVAHRLEDFQRVININTVGTFNVIRLSAGLMGANEPNQDGQRGVIVNTASVAAFDGQIGQAAYSASKAAVVGMTLPIARDLSTQGIRICTIAPGLFNTPM 199          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: DHR11_BOVIN (Dehydrogenase/reductase SDR family member 11 OS=Bos taurus GN=DHRS11 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.983e-15
Identity = 65/206 (31.55%), Postives = 100/206 (48.54%), Query Frame = 2
Query:   86 AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMF-IRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAK-KPGVIINMGSSAG--LYPFYTDPIYSASKGGVVLFTRSLTPYKSKG---IRINVLCPEFVETELALK 682
            A VTG + GIG A++ AL  +G+ V     +    +E+AA  +        + G+P  +   RCD++N  D  + F    + + G+DICIN+AG++ P       T G   W+   +VN++A+  CT++A   M+  K   G IIN+ S  G  + P      YSA+K  V   T  L     +    IR   + P  VET+ A K
Sbjct:    9 ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECK--------SAGYPGTLIPYRCDLSNEEDILSMFSAVRSQHSGVDICINNAGLARPDTLLSGSTSG---WKEMFNVNVLALSICTREACQSMRERKVDDGHIININSMCGHRVPPPAETHFYSATKYAVTALTEGLRQELREARSHIRATCISPGVVETQFAFK 203          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: DHG_BACSU (Glucose 1-dehydrogenase OS=Bacillus subtilis GN=gdh PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.983e-15
Identity = 59/196 (30.10%), Postives = 94/196 (47.96%), Query Frame = 2
Query:   92 VTGGASGIGRALSLALAGKGVFVTVVDLSEEKG-KEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSLT-PYKSKGIRINVLCPEFVETEL 673
            +TG ASG+G+A+++    +   V +   S ++   EV   V K   +         A+ ++ DVT   D     +  +  +G LDI IN+AG+ NP+P HE      + W   +  NL      +++AI         G +INM S   + P+     Y+ASKGG+ L T +L   Y  KGIR+N + P  + T +
Sbjct:   12 ITGAASGLGKAMAIRFGKEQAKVVINYYSNKQDPNEVKEEVIKAGGE---------AVVVQGDVTKEEDVKNIVQTAIKEFGTLDIMINNAGLENPVPSHEMP---LKDWDKVIGTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEVIPWPLFVHYAASKGGIKLMTETLALEYAPKGIRVNNIGPGAINTPI 195          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: DHG1_BACME (Glucose 1-dehydrogenase 1 OS=Bacillus megaterium GN=gdhI PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.983e-15
Identity = 59/201 (29.35%), Postives = 95/201 (47.26%), Query Frame = 2
Query:   77 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS-EEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSLT-PYKSKGIRINVLCPEFVETEL 673
            G    +TG ++G+G+A+++  A +   V V   S EE+   V   ++K   +         A+ ++ DVT   D     +  +  +G LD+ IN+AG+ NP+  HE        W   +D NL      +++AI         G +INM S     P+     Y+ASKGG+ L T +L   Y  KGIR+N + P  + T +
Sbjct:    7 GKVVVITGSSTGLGKAMAIRFATEKAKVVVNYRSKEEEANSVLEEIKKVGGE---------AIAVKGDVTVESDVINLVQSSIKEFGKLDVMINNAGMENPVSSHEMSLS---DWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPI 195          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: FABG_STAAW (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MW2) GN=fabG PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.590e-15
Identity = 66/205 (32.20%), Postives = 106/205 (51.71%), Query Frame = 2
Query:   68 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGIS--NPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSLT-PYKSKGIRINVLCPEFVETEL 673
            +K   SA VTG + GIGR+++L LA +G  V V     ++  E  A+VE+  AK     G  S   I+ +V +  +  A  ++ V+ +G LD+ +N+AGI+  N +   ++Q      W   +D NL  V +C QKA   M   ++ G IIN+ S  G         Y A+K GV+  T+S      S+GI +N + P F+ +++
Sbjct:    1 MKMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAE--AVVEEIKAK-----GVDS-FAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQ-----EWDDVIDTNLKGVFNCIQKATPQM-LRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDM 191          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: FABG_STAAS (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MSSA476) GN=fabG PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.590e-15
Identity = 66/205 (32.20%), Postives = 106/205 (51.71%), Query Frame = 2
Query:   68 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGIS--NPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSLT-PYKSKGIRINVLCPEFVETEL 673
            +K   SA VTG + GIGR+++L LA +G  V V     ++  E  A+VE+  AK     G  S   I+ +V +  +  A  ++ V+ +G LD+ +N+AGI+  N +   ++Q      W   +D NL  V +C QKA   M   ++ G IIN+ S  G         Y A+K GV+  T+S      S+GI +N + P F+ +++
Sbjct:    1 MKMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAE--AVVEEIKAK-----GVDS-FAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQ-----EWDDVIDTNLKGVFNCIQKATPQM-LRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDM 191          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: FABG_STAAR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MRSA252) GN=fabG PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.590e-15
Identity = 66/205 (32.20%), Postives = 106/205 (51.71%), Query Frame = 2
Query:   68 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGIS--NPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSLT-PYKSKGIRINVLCPEFVETEL 673
            +K   SA VTG + GIGR+++L LA +G  V V     ++  E  A+VE+  AK     G  S   I+ +V +  +  A  ++ V+ +G LD+ +N+AGI+  N +   ++Q      W   +D NL  V +C QKA   M   ++ G IIN+ S  G         Y A+K GV+  T+S      S+GI +N + P F+ +++
Sbjct:    1 MKMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAE--AVVEEIKAK-----GVDS-FAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQ-----EWDDVIDTNLKGVFNCIQKATPQM-LRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDM 191          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: FABG_STAAN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain N315) GN=fabG PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.590e-15
Identity = 66/205 (32.20%), Postives = 106/205 (51.71%), Query Frame = 2
Query:   68 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGIS--NPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSLT-PYKSKGIRINVLCPEFVETEL 673
            +K   SA VTG + GIGR+++L LA +G  V V     ++  E  A+VE+  AK     G  S   I+ +V +  +  A  ++ V+ +G LD+ +N+AGI+  N +   ++Q      W   +D NL  V +C QKA   M   ++ G IIN+ S  G         Y A+K GV+  T+S      S+GI +N + P F+ +++
Sbjct:    1 MKMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAE--AVVEEIKAK-----GVDS-FAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQ-----EWDDVIDTNLKGVFNCIQKATPQM-LRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDM 191          
The following BLAST results are available for this feature:
BLAST of CN181640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
DHB12_ANAPL1.518e-1531.96Estradiol 17-beta-dehydrogenase 12 OS=Anas platyrh... [more]
LIMC_RHOER1.983e-1533.64(-)-trans-carveol dehydrogenase OS=Rhodococcus ery... [more]
HCD2_DROME1.983e-1530.243-hydroxyacyl-CoA dehydrogenase type-2 OS=Drosophi... [more]
DHR11_BOVIN1.983e-1531.55Dehydrogenase/reductase SDR family member 11 OS=Bo... [more]
DHG_BACSU1.983e-1530.10Glucose 1-dehydrogenase OS=Bacillus subtilis GN=gd... [more]
DHG1_BACME1.983e-1529.35Glucose 1-dehydrogenase 1 OS=Bacillus megaterium G... [more]
FABG_STAAW2.590e-1532.203-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAS2.590e-1532.203-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAR2.590e-1532.203-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAN2.590e-1532.203-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001E05_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181640 ID=CN181640; Name=CN181640; organism=Citrus sinensis; type=EST; length=714bp
GAGGAAAACTCTTAACCGAGTAGTTTAATCGCTTCCCTTTGCCTCTCTGT
TTGTTCATAAAATGGAGCTCAAACCGGGCTTATCAGCTTTTGTCACCGGC
GGTGCATCTGGGATTGGTAGAGCTTTGAGCCTAGCTCTTGCAGGGAAGGG
AGTCTTTGTGACAGTTGTTGATCTCTCTGAAGAAAAGGGAAAGGAAGTTG
CAGCGCTTGTTGAAAAAGAGAATGCCAAGTTTCATTCAAACTTAGGATTT
CCATCTGCTATGTTTATAAGATGTGATGTGACCAACACAAGGGATACAGC
TGCTGCTTTTGAGAAGCACGTAGCTACATATGGAGGATTGGATATATGTA
TCAACAGTGCTGGCATAAGTAATCCCATTCCATTCCACGAGGATCAAACT
GATGGCACACGTTCATGGAGATTCACTCTTGATGTGAACTTGGTTGCAGT
TATTGATTGCACTCAGAAAGCGATTGGAATTATGCAAGCTGCAAAAAAGC
CTGGAGTGATTATAAATATGGGATCTTCTGCAGGACTTTATCCATTTTAC
ACAGATCCAATCTACTCTGCTTCCAAAGGTGGTGTTGTTTTATTTACTAG
ATCACTTACTCCCTACAAAAGCAAGGGAATTCGCATCAACGTGCTTTGCC
CTGAGTTTGTTGAAACTGAGTTGGCCTTAAAGGCGGGCTCCCCAATAATT
GATCTGATGGGGGG
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