CN181640

Overview
NameCN181640
Unique NameCN181640
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: Y2370_STAAS (Uncharacterized oxidoreductase SAS2370 OS=Staphylococcus aureus (strain MSSA476) GN=SAS2370 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.379e-14
Identity = 59/197 (29.95%), Postives = 93/197 (47.21%), Query Frame = 2
Query:   86 AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSLTPYKSK-GIRINVLCPEFVETEL 673
            A VTG  SGIG A++  L  +G  V +   ++EK + VA  + +++ K            +  DVTN  +     +    T+GGLDI INSAG        + Q D    W   +DVN+   +   Q A+  M   +  G +IN+ S +G     +  IYSA+K  V   T+ L    +K G+++  + P  V+T +
Sbjct:    9 AVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVANQLSQDSVK-----------VVPTDVTNKEEVDELIKIAQQTFGGLDIVINSAGQMLSSKITDYQVD---EWDSMIDVNIKGTLYTVQAALPTM-LEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAI 190          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: UCPA_SALTY (Oxidoreductase ucpA OS=Salmonella typhimurium GN=ucpA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.379e-14
Identity = 60/207 (28.99%), Postives = 98/207 (47.34%), Query Frame = 2
Query:   77 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGI---SNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDP---IYSASKGGVVLFTRSL-TPYKSKGIRINVLCPEFVETELA 676
            G +A +TG + GIG  ++   A  G  + ++D+S+    E+  L ++   + H          ++ DV +     AA  +   T G +DI +N+AG+    N +   E+  D      F +D+N+  V + T KA+      +K G I+ M S  G      DP    Y+ SK  +V  T+SL   Y   GIR+N +CP +V T +A
Sbjct:    6 GKTALITGASQGIGEGIARVFARHGANLILLDISD----EIEKLADELGGRGH------RCTAVKADVRDFASVQAAVARAKETEGRIDILVNNAGVCRLGNFLDMSEEDRD------FHIDINIKGVWNVT-KAVLPEMIKRKDGRIVMMSSVTG--DMVADPGETAYALSKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMA 193          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: UCPA_SALTI (Oxidoreductase ucpA OS=Salmonella typhi GN=ucpA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.379e-14
Identity = 60/207 (28.99%), Postives = 98/207 (47.34%), Query Frame = 2
Query:   77 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGI---SNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDP---IYSASKGGVVLFTRSL-TPYKSKGIRINVLCPEFVETELA 676
            G +A +TG + GIG  ++   A  G  + ++D+S+    E+  L ++   + H          ++ DV +     AA  +   T G +DI +N+AG+    N +   E+  D      F +D+N+  V + T KA+      +K G I+ M S  G      DP    Y+ SK  +V  T+SL   Y   GIR+N +CP +V T +A
Sbjct:    6 GKTALITGASQGIGEGIARVFARHGANLILLDISD----EIEKLADELGGRGH------RCTAVKADVRDFASVQAAVARAKETEGRIDILVNNAGVCRLGNFLDMSEEDRD------FHIDINIKGVWNVT-KAVLPEMIKRKDGRIVMMSSVTG--DMVADPGETAYALSKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMA 193          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: DHBA_BACSU (2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase OS=Bacillus subtilis GN=dhbA PE=1 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 6.379e-14
Identity = 59/203 (29.06%), Postives = 98/203 (48.28%), Query Frame = 2
Query:   77 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFE---KHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSL-TPYKSKGIRINVLCPEFVETEL 673
            G  AF+TG A GIG A++  LA +G  +  VD + EK ++V + ++ E    H+   FP+         + RD+AA  E   +     G +DI +N AG+  P   H    +    W  T  VN   V + + +++      ++ G I+ +GS+A   P  +   Y++SK   V+FT+ L        IR N++ P   ET++
Sbjct:    8 GKIAFITGAAQGIGEAVARTLASQGAHIAAVDYNPEKLEKVVSSLKAEGR--HAE-AFPA---------DVRDSAAIDEITARIEREMGPIDILVNVAGVLRPGLIHSLSDE---EWEATFSVNSTGVFNAS-RSVSKYMMDRRSGSIVTVGSNAAGVPRTSMAAYASSKAAAVMFTKCLGLELAEYNIRCNIVSPGSTETDM 194          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: FABG_CHLTR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia trachomatis GN=fabG PE=1 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 8.331e-14
Identity = 52/198 (26.26%), Postives = 97/198 (48.99%), Query Frame = 2
Query:   83 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSLT-PYKSKGIRINVLCPEFVETEL 673
            +A VTGG+ GIG +++   A +G  V +  ++ E G+  A  + ++  +           F   DV+     +A  +  +A Y  +D+ +N+AGI+          +    W   ++ NL ++ +     I  M  A+  G IIN+ S  GL        Y+A+K G++ F+++L+    SK IR+N + P F++T++
Sbjct:    9 TAIVTGGSRGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGR--------QVSFALVDVSKNDMVSAQVQNFLAEYNTIDVIVNNAGITRDALLMRMSEE---EWSSVINTNLGSIYNVCSAVIRPMIKARS-GAIINISSIVGLRGSPGQTNYAAAKAGIIGFSKALSKEVGSKNIRVNCIAPGFIDTDM 194          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: DH12B_XENLA (Estradiol 17-beta-dehydrogenase 12-B OS=Xenopus laevis GN=hsd17b12-B PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.331e-14
Identity = 59/206 (28.64%), Postives = 105/206 (50.97%), Query Frame = 2
Query:   77 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEK----ENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIP-FHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSL-TPYKSKGIRINVLCPEFVETELA 676
            G  A VTG   GIG+A +  LA +G+ + ++  S EK +E A  +++    E     ++ G P+ ++ R +    RD              + + +N+ GIS   P +  +  D   +    +++N+++V   T+  +  M    K GV++N+ S++G+YP     +YSA+K  V  F+R L   Y+SKG+ +  + P FV T+LA
Sbjct:   54 GKWAVVTGATDGIGKAYAEELARRGMNIVLISRSPEKLEEAAIHIKQKFKVETKIIAADFGKPTEIYERIEA-GLRDLE------------IGVLVNNVGISYEYPEYFLEIPDLENTLDKMININIMSVCQMTRLVLPGMLGRGK-GVVLNISSASGMYPVPLLTVYSATKAFVDFFSRGLHAEYRSKGVTVQSVLPFFVATKLA 245          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: PHAB_ACISR (Acetoacetyl-CoA reductase OS=Acinetobacter sp. (strain RA3849) GN=phaB PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13
Identity = 59/210 (28.10%), Postives = 96/210 (45.71%), Query Frame = 2
Query:   86 AFVTGGASGIGRAL--SLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSA--MFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSLTPYKSK-GIRINVLCPEFVETELALKAGSPII 700
            A VTG   GIG  +   L  AG  +  TVV   E++ K+           +  + GF  +   F+  D+ N     AA ++ +A  G +D+ +N+AGI+    F +   +    W   +D NL  +   TQ     M   +K G I+N+ S  GL   +    YSASK G++ FT++L    ++  I +NV+ P +  T +       +I
Sbjct:    7 ALVTGALGGIGSEICRQLVTAGYKIIATVVPREEDREKQ-----------WLQSEGFQDSDVRFVLTDLNNHEAATAAIQEAIAAEGRVDVLVNNAGITRDATFKKMSYE---QWSQVIDTNLKTLFTVTQPVFNKM-LEQKSGRIVNISSVNGLKGQFGQANYSASKAGIIGFTKALAQEGARSNICVNVVAPGYTATPMVTAMREDVI 201          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: HSD_MYCTU (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium tuberculosis GN=fabG3 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13
Identity = 65/200 (32.50%), Postives = 95/200 (47.50%), Query Frame = 2
Query:   77 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSLT-PYKSKGIRINVLCPEFVETEL 673
            G  A V+GGA G+G +   A+  +G  V   D+ +E+GK VAA +              +A ++  DVT      AA +  V  +GGL + +N+AGI N I   ED       W+  LDVNL  V    +  +  M+ A + G IIN+ S  GL        Y+A+K  V   T+S        GIR+N + P  V+T +
Sbjct:    7 GKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAVAAELA------------DAARYVHLDVTQPAQWTAAVDTAVTAFGGLHVLVNNAGILN-IGTIEDY--ALTEWQRILDVNLTGVFLGIRAVVKPMKEAGR-GSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPM 190          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: HSD_MYCBO (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium bovis GN=fabG3 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13
Identity = 65/200 (32.50%), Postives = 95/200 (47.50%), Query Frame = 2
Query:   77 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSLT-PYKSKGIRINVLCPEFVETEL 673
            G  A V+GGA G+G +   A+  +G  V   D+ +E+GK VAA +              +A ++  DVT      AA +  V  +GGL + +N+AGI N I   ED       W+  LDVNL  V    +  +  M+ A + G IIN+ S  GL        Y+A+K  V   T+S        GIR+N + P  V+T +
Sbjct:    7 GKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAVAAELA------------DAARYVHLDVTQPAQWTAAVDTAVTAFGGLHVLVNNAGILN-IGTIEDY--ALTEWQRILDVNLTGVFLGIRAVVKPMKEAGR-GSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPM 190          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: FABG_VIBCH (3-oxoacyl-[acyl-carrier-protein] reductase OS=Vibrio cholerae GN=fabG PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13
Identity = 57/201 (28.36%), Postives = 100/201 (49.75%), Query Frame = 2
Query:   77 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAI-GIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSLT-PYKSKGIRINVLCPEFVETEL 673
            G  A VTG + GIG+A++  LA +G  V +   + E G +  +    +N K            +  +VTN     A  +     +GG+DI +N+AGI+        + +    W   ++ NL ++   ++  + G+M+  K+ G IIN+GS  G         Y+A+K GV+ FT+S+     S+G+ +N + P F+ET++
Sbjct:    5 GKVALVTGASRGIGKAIAELLAERGAKV-IGTATSESGAQAISDYLGDNGKG-----------MALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEE---EWSDIMETNLTSIFRLSKAVLRGMMK--KRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDM 188          
The following BLAST results are available for this feature:
BLAST of CN181640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
Y2370_STAAS6.379e-1429.95Uncharacterized oxidoreductase SAS2370 OS=Staphylo... [more]
UCPA_SALTY6.379e-1428.99Oxidoreductase ucpA OS=Salmonella typhimurium GN=u... [more]
UCPA_SALTI6.379e-1428.99Oxidoreductase ucpA OS=Salmonella typhi GN=ucpA PE... [more]
DHBA_BACSU6.379e-1429.062,3-dihydro-2,3-dihydroxybenzoate dehydrogenase OS... [more]
FABG_CHLTR8.331e-1426.263-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
DH12B_XENLA8.331e-1428.64Estradiol 17-beta-dehydrogenase 12-B OS=Xenopus la... [more]
PHAB_ACISR1.088e-1328.10Acetoacetyl-CoA reductase OS=Acinetobacter sp. (st... [more]
HSD_MYCTU1.088e-1332.503-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
HSD_MYCBO1.088e-1332.503-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
FABG_VIBCH1.088e-1328.363-oxoacyl-[acyl-carrier-protein] reductase OS=Vibr... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001E05_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181640 ID=CN181640; Name=CN181640; organism=Citrus sinensis; type=EST; length=714bp
GAGGAAAACTCTTAACCGAGTAGTTTAATCGCTTCCCTTTGCCTCTCTGT
TTGTTCATAAAATGGAGCTCAAACCGGGCTTATCAGCTTTTGTCACCGGC
GGTGCATCTGGGATTGGTAGAGCTTTGAGCCTAGCTCTTGCAGGGAAGGG
AGTCTTTGTGACAGTTGTTGATCTCTCTGAAGAAAAGGGAAAGGAAGTTG
CAGCGCTTGTTGAAAAAGAGAATGCCAAGTTTCATTCAAACTTAGGATTT
CCATCTGCTATGTTTATAAGATGTGATGTGACCAACACAAGGGATACAGC
TGCTGCTTTTGAGAAGCACGTAGCTACATATGGAGGATTGGATATATGTA
TCAACAGTGCTGGCATAAGTAATCCCATTCCATTCCACGAGGATCAAACT
GATGGCACACGTTCATGGAGATTCACTCTTGATGTGAACTTGGTTGCAGT
TATTGATTGCACTCAGAAAGCGATTGGAATTATGCAAGCTGCAAAAAAGC
CTGGAGTGATTATAAATATGGGATCTTCTGCAGGACTTTATCCATTTTAC
ACAGATCCAATCTACTCTGCTTCCAAAGGTGGTGTTGTTTTATTTACTAG
ATCACTTACTCCCTACAAAAGCAAGGGAATTCGCATCAACGTGCTTTGCC
CTGAGTTTGTTGAAACTGAGTTGGCCTTAAAGGCGGGCTCCCCAATAATT
GATCTGATGGGGGG
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