CN181640

Overview
NameCN181640
Unique NameCN181640
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: UCPA_ECOLI (Oxidoreductase ucpA OS=Escherichia coli (strain K12) GN=ucpA PE=1 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13
Identity = 61/204 (29.90%), Postives = 97/204 (47.55%), Query Frame = 2
Query:   77 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDP---IYSASKGGVVLFTRSLT-PYKSKGIRINVLCPEFVETELA 676
            G +A +TG   GIG  ++   A  G  + ++D+S E    +  L ++   + H          +  DV +    AAA ++     G +DI +N+AG+     F  D +D  R   F +D+N+  V + T KA+     A+K G I+ M S  G      DP    Y+ +K  +V  T+SL   Y   GIR+N +CP +V T +A
Sbjct:    6 GKTALITGALQGIGEGIARTFARHGANLILLDISPE----IEKLADELCGRGHR------CTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFL-DMSDDDRD--FHIDINIKGVWNVT-KAVLPEMIARKDGRIVMMSSVTG--DMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMA 193          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: UCPA_ECO57 (Oxidoreductase ucpA OS=Escherichia coli O157:H7 GN=ucpA PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13
Identity = 61/204 (29.90%), Postives = 97/204 (47.55%), Query Frame = 2
Query:   77 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDP---IYSASKGGVVLFTRSLT-PYKSKGIRINVLCPEFVETELA 676
            G +A +TG   GIG  ++   A  G  + ++D+S E    +  L ++   + H          +  DV +    AAA ++     G +DI +N+AG+     F  D +D  R   F +D+N+  V + T KA+     A+K G I+ M S  G      DP    Y+ +K  +V  T+SL   Y   GIR+N +CP +V T +A
Sbjct:    6 GKTALITGALQGIGEGIARTFARHGANLILLDISPE----IEKLADELCGRGHR------CTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFL-DMSDDDRD--FHIDINIKGVWNVT-KAVLPEMIARKDGRIVMMSSVTG--DMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMA 193          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: HCDS_XANP2 (2-(S)-hydroxypropyl-CoM dehydrogenase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=xecE PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13
Identity = 58/189 (30.69%), Postives = 92/189 (48.68%), Query Frame = 2
Query:   92 VTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAI-GIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSL-TPYKSKGIRINVLCP 652
            +TGGA+GIG A++ A    G  V ++D          A  ++  A+F +     +A  +  DVT+     AA        G L   +N+AGI+     H  + +   +W   + VN+      ++ A+ G+++  +  G I+N GS AGL    T   Y A+KG VV  TR +   Y  +GIR+NV+CP
Sbjct:    9 ITGGAAGIGLAVAHAAIRAGARVALIDRD-------GACAQRAAAEFGA-----AAWGVGADVTDEAAITAAMAGAQRALGPLTGLVNNAGIAGFGSVHATEVE---TWSRIMAVNVTGTFLASKAALFGMLERGR--GAIVNFGSVAGLVGIPTMAAYCAAKGAVVNLTRQMAADYSGRGIRVNVVCP 180          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: FABG_SHIFL (3-oxoacyl-[acyl-carrier-protein] reductase OS=Shigella flexneri GN=fabG PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13
Identity = 59/202 (29.21%), Postives = 99/202 (49.01%), Query Frame = 2
Query:   77 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGIS--NPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSLT-PYKSKGIRINVLCPEFVETEL 673
            G  A VTG + GIGRA++  LA +G             K +     +  A+  S+    +   +  +VT+     +  EK  A +G +DI +N+AGI+  N +   +D+      W   ++ NL +V   + KA+      K+ G II +GS  G         Y+A+K G++ F++SL     S+GI +NV+ P F+ET++
Sbjct:    5 GKIALVTGASRGIGRAIAETLAARG------------AKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDE-----EWNDIIETNLSSVFRLS-KAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDM 188          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: FABG_ECOLI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Escherichia coli (strain K12) GN=fabG PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13
Identity = 59/202 (29.21%), Postives = 99/202 (49.01%), Query Frame = 2
Query:   77 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGIS--NPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSLT-PYKSKGIRINVLCPEFVETEL 673
            G  A VTG + GIGRA++  LA +G             K +     +  A+  S+    +   +  +VT+     +  EK  A +G +DI +N+AGI+  N +   +D+      W   ++ NL +V   + KA+      K+ G II +GS  G         Y+A+K G++ F++SL     S+GI +NV+ P F+ET++
Sbjct:    5 GKIALVTGASRGIGRAIAETLAARG------------AKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDE-----EWNDIIETNLSSVFRLS-KAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDM 188          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: DH12A_XENLA (Estradiol 17-beta-dehydrogenase 12-A OS=Xenopus laevis GN=hsd17b12-A PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13
Identity = 58/206 (28.16%), Postives = 104/206 (50.49%), Query Frame = 2
Query:   77 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEK----ENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIP-FHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSL-TPYKSKGIRINVLCPEFVETELA 676
            G  A VTG   GIG+A +  LA +G+ + ++  S EK  E A  +++    E     ++ G P+ ++ R +    RD              + + +N+ G+S   P +  +  D   +    +++N+++V   T+  +  M    K GVI+N+ S++G+YP     +YSA+K  V  F+R L   Y++KGI +  + P +V T+LA
Sbjct:   54 GKWAVVTGATDGIGKAYAEELARRGMSIVLISRSPEKLDEAAKHIKETFKVETKIIAADFGKPTEIYERIEA-GLRDLE------------IGVLVNNVGVSYEYPEYFLEIPDLENTLDKMININIMSVCQMTRLVLPGMLGRGK-GVILNISSASGMYPVPLLTVYSATKAFVDFFSRGLHAEYRNKGINVQSVLPFYVATKLA 245          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: DH12A_DANRE (Estradiol 17-beta-dehydrogenase 12-A OS=Danio rerio GN=hsd17b12a PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13
Identity = 68/215 (31.63%), Postives = 104/215 (48.37%), Query Frame = 2
Query:   71 KPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDI--CINSAGISNPIP-FHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSL-TPYKSKGIRINVLCPEFVETELALKAGSPIID 703
            K G  A VTG   GIG++ +  LA +G  + ++  S+EK  +VA  +E         +    +           D     EK +A   GL+I   +N+ GIS   P F     D        ++VN+ +V   T+  +  M+A  K GVI+N+ S++G++P     IYS++K  V  F+R L T YK KGI I  + P FV T++  K   P +D
Sbjct:   54 KLGKWAVVTGATDGIGKSYAEELARRGFSMMLISRSQEKLDDVAKSLESTYKVETKTIAVDFSQI---------DVYPKIEKGLA---GLEIGILVNNVGISYSYPEFFLHIPDLENFITTMINVNITSVCQMTRLVLPRMEARAK-GVILNISSASGMFPVPLLTIYSSTKAFVDFFSRGLQTEYKCKGIIIQSVLPFFVATKMT-KIRKPTLD 254          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: FABG_AQUAE (3-oxoacyl-[acyl-carrier-protein] reductase OS=Aquifex aeolicus GN=fabG PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.135e-13
Identity = 61/207 (29.47%), Postives = 94/207 (45.41%), Query Frame = 2
Query:   62 MELK-PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVA-ALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSLT-PYKSKGIRINVLCPEFVETEL 673
            ME+K  G  + VTG   GIGRA++  LA  G  V +   S E+ K VA  +  K   K H          +  ++ +      AFE+      G+DI +N+AGI+    F          W   L VNL      TQ ++  M   ++ G I+N+ S  G         YS +K G++ FT+SL      + + +N + P F+ET++
Sbjct:    1 MEIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHG---------VEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLF---LRMSLLDWEEVLKVNLTGTFLVTQNSLRKM-IKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDM 194          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: CBR4_BOVIN (Carbonyl reductase family member 4 OS=Bos taurus GN=CBR4 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.135e-13
Identity = 57/195 (29.23%), Postives = 95/195 (48.72%), Query Frame = 2
Query:   92 VTGGASGIGRALSLALAGKGVFVTVVDLSEEKGKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSLT-PYKSKGIRINVLCPEFVETEL 673
            V GG+ GIGRA++  +A +G  + +V  + E  +  A  +  ++            + + CDV    D    FE+     G ++  +N+AGI+         T+   S    L  NL+  +   + A+  M   ++ G I+N+GS  GL       +YSASKGG+V F+R+L      K IR+NV+ P F+ T++
Sbjct:    7 VFGGSRGIGRAVARLMAQRGYRLAIVARNLEGARAAAGDLGGDH------------LALSCDVAKEHDVQNTFEEIEKNLGRVNFLVNAAGINRDNLLVRTNTEDMLS---QLHTNLLGSMLTCRAALKTMIKQQR-GSIVNVGSVVGLKGNSGQSVYSASKGGLVGFSRALAKEVAKKKIRVNVVAPGFIHTDM 185          
BLAST of CN181640 vs. ExPASy Swiss-Prot
Match: YHDF_BACSU (Uncharacterized oxidoreductase yhdF OS=Bacillus subtilis GN=yhdF PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.400e-13
Identity = 64/204 (31.37%), Postives = 98/204 (48.04%), Query Frame = 2
Query:   77 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK-GKEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTRDTAAAFEKHVATYGGLDICINSAGISNPIPFHEDQ--TDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPI-YSASKGGVVLFTRSLT-PYKSKGIRINVLCPEFVETEL 673
            G  A +TGG SGIGRA ++A A +G  ++++ L E    +E    +EKEN +          + I  DV +      A ++ V  +G LDI +N+A   +P    +D      T     T   N+ ++   T+KA+  +Q     G  I   +S   Y   T  I YS++KG +V FTRS+      KGIR+N + P  + T L
Sbjct:   45 GKVAIITGGDSGIGRAAAIAFAKEGADISILYLDEHSDAEETRKRIEKENVR---------CLLIPGDVGDENHCEQAVQQTVDHFGKLDILVNNAAEQHP----QDSILNISTEQLEKTFRTNIFSMFHMTKKALPHLQ----EGCAIINTTSITAYEGDTALIDYSSTKGAIVSFTRSMAKSLADKGIRVNAVAPGPIWTPL 231          
The following BLAST results are available for this feature:
BLAST of CN181640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
UCPA_ECOLI3.166e-1329.90Oxidoreductase ucpA OS=Escherichia coli (strain K1... [more]
UCPA_ECO573.166e-1329.90Oxidoreductase ucpA OS=Escherichia coli O157:H7 GN... [more]
HCDS_XANP23.166e-1330.692-(S)-hydroxypropyl-CoM dehydrogenase OS=Xanthobac... [more]
FABG_SHIFL3.166e-1329.213-oxoacyl-[acyl-carrier-protein] reductase OS=Shig... [more]
FABG_ECOLI3.166e-1329.213-oxoacyl-[acyl-carrier-protein] reductase OS=Esch... [more]
DH12A_XENLA3.166e-1328.16Estradiol 17-beta-dehydrogenase 12-A OS=Xenopus la... [more]
DH12A_DANRE3.166e-1331.63Estradiol 17-beta-dehydrogenase 12-A OS=Danio reri... [more]
FABG_AQUAE4.135e-1329.473-oxoacyl-[acyl-carrier-protein] reductase OS=Aqui... [more]
CBR4_BOVIN4.135e-1329.23Carbonyl reductase family member 4 OS=Bos taurus G... [more]
YHDF_BACSU5.400e-1331.37Uncharacterized oxidoreductase yhdF OS=Bacillus su... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001E05_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181640 ID=CN181640; Name=CN181640; organism=Citrus sinensis; type=EST; length=714bp
GAGGAAAACTCTTAACCGAGTAGTTTAATCGCTTCCCTTTGCCTCTCTGT
TTGTTCATAAAATGGAGCTCAAACCGGGCTTATCAGCTTTTGTCACCGGC
GGTGCATCTGGGATTGGTAGAGCTTTGAGCCTAGCTCTTGCAGGGAAGGG
AGTCTTTGTGACAGTTGTTGATCTCTCTGAAGAAAAGGGAAAGGAAGTTG
CAGCGCTTGTTGAAAAAGAGAATGCCAAGTTTCATTCAAACTTAGGATTT
CCATCTGCTATGTTTATAAGATGTGATGTGACCAACACAAGGGATACAGC
TGCTGCTTTTGAGAAGCACGTAGCTACATATGGAGGATTGGATATATGTA
TCAACAGTGCTGGCATAAGTAATCCCATTCCATTCCACGAGGATCAAACT
GATGGCACACGTTCATGGAGATTCACTCTTGATGTGAACTTGGTTGCAGT
TATTGATTGCACTCAGAAAGCGATTGGAATTATGCAAGCTGCAAAAAAGC
CTGGAGTGATTATAAATATGGGATCTTCTGCAGGACTTTATCCATTTTAC
ACAGATCCAATCTACTCTGCTTCCAAAGGTGGTGTTGTTTTATTTACTAG
ATCACTTACTCCCTACAAAAGCAAGGGAATTCGCATCAACGTGCTTTGCC
CTGAGTTTGTTGAAACTGAGTTGGCCTTAAAGGCGGGCTCCCCAATAATT
GATCTGATGGGGGG
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