CN181638 | Citrus Genome Database

Overview


Name	CN181638
Unique Name	CN181638
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	668

Libraries


Library Name	Type
Ruby Orange Developing Flower cDNA Library	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig2461	contig	Csv1_Contig2461:31..699.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CN181638 vs. ExPASy Swiss-Prot
Match: ENO_PORGI (Enolase OS=Porphyromonas gingivalis GN=eno PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 2.087e-45
Identity = 103/183 (56.28%), Postives = 122/183 (66.67%), Query Frame = 2

Query:   38 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRD-GGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 583
            I  +  R+I DSRGNPTVEVDV  + G + RAAVPSGASTG  EA+ELRD   + Y GKGV KAV NVN +I PAL G    EQTAID  ++ +LDGT       K  LGANA+L VSLAV KA A    IPLY++I    G+   VLPVP  N+INGGSH+   +A QEFMI PVGA  F++
Sbjct:    3 IAKIIGREILDSRGNPTVEVDVHLACGIIGRAAVPSGASTGENEAIELRDQDKARYCGKGVLKAVKNVNEVIDPALCGMSVLEQTAIDRKLI-ELDGTKT-----KSNLGANAMLGVSLAVAKAAAAYLDIPLYRYI---GGSNTYVLPVPMMNIINGGSHSDAPIAFQEFMIRPVGACCFRE 176

HSP 2 Score: 27.335 bits (59), Expect = 2.087e-45
Identity = 10/19 (52.63%), Postives = 15/19 (78.95%), Query Frame = 1

Query:  574 FQEAMKMGVEVYHHLKAVI 630
            F+E ++MG EV+H LK V+
Sbjct:  174 FREGLRMGAEVFHALKKVL 192

[Close]

BLAST of CN181638 vs. ExPASy Swiss-Prot
Match: ENO_PORG3 (Enolase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=eno PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 2.087e-45
Identity = 103/183 (56.28%), Postives = 122/183 (66.67%), Query Frame = 2

Query:   38 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRD-GGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 583
            I  +  R+I DSRGNPTVEVDV  + G + RAAVPSGASTG  EA+ELRD   + Y GKGV KAV NVN +I PAL G    EQTAID  ++ +LDGT       K  LGANA+L VSLAV KA A    IPLY++I    G+   VLPVP  N+INGGSH+   +A QEFMI PVGA  F++
Sbjct:    3 IVKIIGREILDSRGNPTVEVDVHLACGIIGRAAVPSGASTGENEAIELRDQDKARYCGKGVLKAVKNVNEVIDPALCGMSVLEQTAIDRKLI-ELDGTKT-----KSNLGANAMLGVSLAVAKAAAAYLDIPLYRYI---GGSNTYVLPVPMMNIINGGSHSDAPIAFQEFMIRPVGACCFRE 176

HSP 2 Score: 27.335 bits (59), Expect = 2.087e-45
Identity = 10/19 (52.63%), Postives = 15/19 (78.95%), Query Frame = 1

Query:  574 FQEAMKMGVEVYHHLKAVI 630
            F+E ++MG EV+H LK V+
Sbjct:  174 FREGLRMGAEVFHALKKVL 192

[Close]

BLAST of CN181638 vs. ExPASy Swiss-Prot
Match: ENO_CAUCR (Enolase OS=Caulobacter crescentus GN=eno PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.087e-45
Identity = 100/183 (54.64%), Postives = 122/183 (66.67%), Query Frame = 2

Query:   38 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 583
            I  + AR+I DSRGNPTVEVDV   DG   RAAVPSGASTG +EA E RDG  + YLGKGV +AV  VN  I  AL+G D  +Q  +DN M+ +LDGT N     K +LGANAIL VSLA  KA A    +PLYK++  ++     VLP P  N+INGG+HA N + +QEFMILP GA  F++
Sbjct:    4 IVDIIAREILDSRGNPTVEVDVILEDGAFGRAAVPSGASTGAHEANEKRDGDKARYLGKGVQQAVDAVNGEIFDALSGVDAEDQRRVDNLMI-ELDGTPN-----KARLGANAILGVSLATAKAAAESAGLPLYKYVGGVNAR---VLPTPMMNIINGGAHADNPIDIQEFMILPTGAKDFRE 177

HSP 2 Score: 28.1054 bits (61), Expect = 2.087e-45
Identity = 13/31 (41.94%), Postives = 19/31 (61.29%), Query Frame = 1

Query:  574 FQEAMKMGVEVYHHLKAVIKKKYGQDATNVG 666
            F+E ++MG E++H LK  +K       TNVG
Sbjct:  175 FREGLRMGAEIFHALKKALKD--AGHNTNVG 203

[Close]

BLAST of CN181638 vs. ExPASy Swiss-Prot
Match: ENO_CAUCN (Enolase OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=eno PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.087e-45
Identity = 100/183 (54.64%), Postives = 122/183 (66.67%), Query Frame = 2

Query:   38 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 583
            I  + AR+I DSRGNPTVEVDV   DG   RAAVPSGASTG +EA E RDG  + YLGKGV +AV  VN  I  AL+G D  +Q  +DN M+ +LDGT N     K +LGANAIL VSLA  KA A    +PLYK++  ++     VLP P  N+INGG+HA N + +QEFMILP GA  F++
Sbjct:    4 IVDIIAREILDSRGNPTVEVDVILEDGAFGRAAVPSGASTGAHEANEKRDGDKARYLGKGVQQAVDAVNGEIFDALSGVDAEDQRRVDNLMI-ELDGTPN-----KARLGANAILGVSLATAKAAAESAGLPLYKYVGGVNAR---VLPTPMMNIINGGAHADNPIDIQEFMILPTGAKDFRE 177

HSP 2 Score: 28.1054 bits (61), Expect = 2.087e-45
Identity = 13/31 (41.94%), Postives = 19/31 (61.29%), Query Frame = 1

Query:  574 FQEAMKMGVEVYHHLKAVIKKKYGQDATNVG 666
            F+E ++MG E++H LK  +K       TNVG
Sbjct:  175 FREGLRMGAEIFHALKKALKD--AGHNTNVG 203

[Close]

BLAST of CN181638 vs. ExPASy Swiss-Prot
Match: ENO_CORU7 (Enolase OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) GN=eno PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.087e-45
Identity = 95/180 (52.78%), Postives = 124/180 (68.89%), Query Frame = 2

Query:   38 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSF 577
            I  V A +I DSRGNPTVEV+V   DG + RAAVPSGASTG++EA ELRDGG  YLGKGV+KAV  VN  I  ALAG +  +Q  ID  ++ +LDGT N     K +LGANA+L VS+AV  A A    + L++++   +G+   VLPVP  N++NGG+HA + + +QEFMI P+GA +F
Sbjct:    4 ILNVSALEIMDSRGNPTVEVEVILDDGSMGRAAVPSGASTGVHEAHELRDGGDRYLGKGVAKAVDFVNTEIDDALAGLEADDQRLIDQTLL-ELDGTEN-----KSRLGANALLGVSMAVAHAAADSAGLELFRYVGGPNGH---VLPVPMMNILNGGAHADSGVDVQEFMIAPIGAETF 174

HSP 2 Score: 31.9574 bits (71), Expect = 2.087e-45
Identity = 14/22 (63.64%), Postives = 17/22 (77.27%), Query Frame = 1

Query:  574 FQEAMKMGVEVYHHLKAVIKKK 639
            F EA+++G EVYH LK VIK K
Sbjct:  174 FAEALQVGAEVYHSLKDVIKAK 195

[Close]

BLAST of CN181638 vs. ExPASy Swiss-Prot
Match: ENO_NOVAD (Enolase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=eno PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.137e-45
Identity = 103/187 (55.08%), Postives = 126/187 (67.38%), Query Frame = 2

Query:   38 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKKP*RW 595
            I  + AR+I DSRGNPTVEVDV   DG   RAAVPSGASTG +EA+ELRDG  + YLGKGV+KAV+ VN+ I   + G D  +Q  ID  M+ +LDGT N     K +LGANAIL  SLAV KA A  + +PLY ++  +S +   VLPVP  N+INGG HA N +  QEFMI+PVGA S  +  RW
Sbjct:    4 IIDIHAREILDSRGNPTVEVDVLLEDGSFGRAAVPSGASTGAHEAVELRDGDKARYLGKGVTKAVTAVNSDIAECILGLDAEDQRDIDLAMI-ELDGTEN-----KSRLGANAILGTSLAVAKAAADARGLPLYSYVGGVSAH---VLPVPMMNIINGGEHADNPIDFQEFMIMPVGAPSLAEAVRW 181

[Close]

BLAST of CN181638 vs. ExPASy Swiss-Prot
Match: ENO_PROVI (Enolase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=eno PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 2.719e-45
Identity = 104/181 (57.46%), Postives = 122/181 (67.40%), Query Frame = 2

Query:   38 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDG-GSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSF 577
            I  + ARQI DSRGNPTVEVDV T +    RAAVPSGASTG++EA+ELRDG  S YLGKGV KAV NVN I+   L G   TEQ  ID  M+ +LDGT N     K KLGANA+L VSLA  KAGA    + LY++I     N    LPVP  NVINGG+HA N +  QEFMI+P+G +S+
Sbjct:    4 IRKIHARQILDSRGNPTVEVDVYT-ESSFGRAAVPSGASTGVHEAVELRDGDASVYLGKGVLKAVENVNTIVDEGLRGMLVTEQEEIDR-MLLELDGTPN-----KSKLGANALLGVSLACAKAGAEYSGMSLYRYIGGTMAN---TLPVPMMNVINGGAHADNTVDFQEFMIMPIGFTSY 174

HSP 2 Score: 26.9498 bits (58), Expect = 2.719e-45
Identity = 8/22 (36.36%), Postives = 17/22 (77.27%), Query Frame = 1

Query:  574 FQEAMKMGVEVYHHLKAVIKKK 639
            + +A++ G E++H LKA++K +
Sbjct:  174 YSDALRCGAEIFHALKALLKSR 195

[Close]

BLAST of CN181638 vs. ExPASy Swiss-Prot
Match: ENO_EDWI9 (Enolase OS=Edwardsiella ictaluri (strain 93-146) GN=eno PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 2.719e-45
Identity = 104/184 (56.52%), Postives = 120/184 (65.22%), Query Frame = 2

Query:   38 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNK-NLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 583
            I  V  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV KAVS VN  I   + GKD  +Q  ID  M+ +LDGT N     K K GANAILAVSLA  KA A  K +PLY HIAEL+G      +P+P  N+INGG HA N + +QEFMI PVGA + K+
Sbjct:    4 IVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVLKAVSAVNGPIAEVIIGKDAKDQANIDQIMI-ELDGTEN-----KSKFGANAILAVSLANAKAAAAAKGMPLYAHIAELNGTPGKYSMPLPMMNIINGGEHADNNVDIQEFMIQPVGAKTLKE 181

HSP 2 Score: 26.5646 bits (57), Expect = 2.719e-45
Identity = 10/21 (47.62%), Postives = 17/21 (80.95%), Query Frame = 1

Query:  577 QEAMKMGVEVYHHLKAVIKKK 639
            +EA+++G EV+H+L  V+K K
Sbjct:  180 KEAVRIGSEVFHNLAKVLKSK 200

[Close]

BLAST of CN181638 vs. ExPASy Swiss-Prot
Match: ENO_STRSV (Enolase OS=Streptococcus sanguinis (strain SK36) GN=eno PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.719e-45
Identity = 102/187 (54.55%), Postives = 123/187 (65.78%), Query Frame = 2

Query:   38 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKKP*RW 595
            IT V AR++ DSRGNPT+EV+V T  G   R  VPSGASTG +EA+ELRDG  S Y G G  KAV NVN +I  A+ G D  +Q AID  M+  LDGT N     K KLGANAIL VS+AV +A A   ++PLY +   L G    VLP P  N+INGGSH+   +A QEFMILPVGA +FK+  R+
Sbjct:    4 ITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYGGLGTQKAVDNVNNVIAEAIIGYDVRDQQAIDRAMI-ALDGTPN-----KGKLGANAILGVSIAVARAAADYLEVPLYSY---LGGFNTKVLPTPMMNIINGGSHSDAPIAFQEFMILPVGAPTFKEALRY 181

HSP 2 Score: 28.4906 bits (62), Expect = 2.719e-45
Identity = 9/22 (40.91%), Postives = 17/22 (77.27%), Query Frame = 1

Query:  574 FQEAMKMGVEVYHHLKAVIKKK 639
            F+EA++ G E++H LK ++K +
Sbjct:  175 FKEALRYGAEIFHALKKILKSR 196

[Close]

BLAST of CN181638 vs. ExPASy Swiss-Prot
Match: ENO_FUSNN (Enolase OS=Fusobacterium nucleatum subsp. nucleatum GN=eno PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 2.719e-45
Identity = 101/183 (55.19%), Postives = 119/183 (65.03%), Query Frame = 2

Query:   38 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 583
            I  V  R+I DSRGNPTVEVDV    G   RAAVPSGASTG +EA+ELRD     YLGKGV KAV+NVN  I  AL G D   Q  ID  M+ +LD T N     K +LGANAIL VSLAV KA A     PLYK+   L G  +  LP+P  N++NGG+HA + + +QEFMI PVGA SF++
Sbjct:    4 IVEVIGREILDSRGNPTVEVDVILECGAKGRAAVPSGASTGSHEAVELRDEDKGRYLGKGVLKAVNNVNTEIREALLGMDALNQVEIDKVML-ELDRTPN-----KGRLGANAILGVSLAVAKAAAEALGQPLYKY---LGGVNSKELPLPMMNILNGGAHADSAVDLQEFMIQPVGAKSFRE 177

HSP 2 Score: 36.965 bits (84), Expect = 2.719e-45
Identity = 17/31 (54.84%), Postives = 23/31 (74.19%), Query Frame = 1

Query:  574 FQEAMKMGVEVYHHLKAVIKKKYGQDATNVG 666
            F+EAM+MG EV+HHL  ++K     D+TNVG
Sbjct:  175 FREAMQMGAEVFHHLGKILKA--NGDSTNVG 203

The following BLAST results are available for this feature:

BLAST of CN181638 vs. ExPASy Swiss-Prot

BLAST of CN181638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
ENO_PORGI	2.087e-45	56.28	Enolase OS=Porphyromonas gingivalis GN=eno PE=3 SV...	[more]
ENO_PORG3	2.087e-45	56.28	Enolase OS=Porphyromonas gingivalis (strain ATCC 3...	[more]
ENO_CAUCR	2.087e-45	54.64	Enolase OS=Caulobacter crescentus GN=eno PE=3 SV=1	[more]
ENO_CAUCN	2.087e-45	54.64	Enolase OS=Caulobacter crescentus (strain NA1000 /...	[more]
ENO_CORU7	2.087e-45	52.78	Enolase OS=Corynebacterium urealyticum (strain ATC...	[more]
ENO_NOVAD	2.137e-45	55.08	Enolase OS=Novosphingobium aromaticivorans (strain...	[more]
ENO_PROVI	2.719e-45	57.46	Enolase OS=Prosthecochloris vibrioformis (strain D...	[more]
ENO_EDWI9	2.719e-45	56.52	Enolase OS=Edwardsiella ictaluri (strain 93-146) G...	[more]
ENO_STRSV	2.719e-45	54.55	Enolase OS=Streptococcus sanguinis (strain SK36) G...	[more]
ENO_FUSNN	2.719e-45	55.19	Enolase OS=Fusobacterium nucleatum subsp. nucleatu...	[more]

Pages

Properties


Property Name	Value
Genbank description	UCRCS04_0001E04_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001E04, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CN181638 ID=CN181638; Name=CN181638; organism=Citrus sinensis; type=EST; length=668bp
GAGGCGCTTTTCCAGCTTTCAGAAAATGGCAATAACCATCACTGCCGTCA
AAGCCAGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGAGGTCGAC
GTGACAACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAAGCGGTGC
ATCCACCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGCTCTGATT
ACCTAGGCAAGGGTGTATCGAAGGCTGTTAGCAATGTCAACGCCATCATT
GGCCCTGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTATTGACAA
CTATATGGTACAACAACTTGATGGAACTGTAAATGAGTGGGGTTGGTGCA
AACAGAAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGCTGTCTGC
AAGGCTGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATATTGCCGA
ACTCTCTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTCAATGTCA
TTAATGGTGGATCACATGCTGGAAACAAACTTGCTATGCAGGAGTTTATG
ATTCTTCCTGTAGGAGCTTCCTCTTTCAAGAAGCCATGAAGATGGGTGTA
GAAGTATATCACCATCTGAAGGCTGTGATTAAAAAGAAATACGGCCAGGA
TGCTACAAATGTTGGTGA