CN181636

Overview
NameCN181636
Unique NameCN181636
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length617
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN181636 vs. ExPASy Swiss-Prot
Match: ENL1_ARATH (Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 5.033e-11
Identity = 36/97 (37.11%), Postives = 50/97 (51.55%), Query Frame = 2 
Query:   95 GESSGWTM----GTDYSTWTSGKTFAVGDSLVFNYGSGH-TVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSGMKLAVTV 370
            G+S  W +       ++ W     F VGD +VF Y SG  +V EV+   YNSC   N + + + G T + L  +G  YFI G  GHC  G KL++ V
Sbjct:   35 GKSGDWKIPPSSSYSFTEWAQKARFKVGDFIVFRYESGKDSVLEVTKEAYNSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSLVV 131
The following BLAST results are available for this feature:
BLAST of CN181636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
ENL1_ARATH5.033e-1137.11Early nodulin-like protein 1 OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001E03_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181636 ID=CN181636; Name=CN181636; organism=Citrus sinensis; type=EST; length=617bp
CTCTTAAATGGCAGGAGTTTTCTCTGGGTTGGTTGTTTGTGCAGTTTTAG
TCTTTTGTGTGGTGGTTCCAAGCTTTGCTACAGTTTACAATGTAGGAGAG
TCCTCAGGCTGGACAATGGGTACTGACTATAGCACTTGGACCAGTGGCAA
GACATTTGCTGTTGGTGACAGCCTTGTTTTCAACTATGGAAGTGGGCACA
CTGTTGATGAAGTGAGTGGTAGTGACTACAACTCATGCACCGTGGGAAAT
GCAATCACATCAGACAGTTCAGGTGCCACCACCATCACTCTAAAGACTGC
CGGAACACACTACTTCATTTGTGGTGTCCCTGGTCACTGCGGCAGCGGCA
TGAAGCTTGCCGTCACTGTGGGATCAGGGTCACCAACCGCTTCTCCATCA
GGCTCAGGTTCATCATCTACAGGTGGCTCTGGCGGTTCTTCGCTGCCTTC
TGGCCGCAATACGACAACCACCAAAACTTCACCTTATACACCTGATTTAT
CTTCGGGGGCTAATTTCTCTCCATTTGTTGCTCTAGGAATTACTTTGTGT
TGCATTCTTCATGTTGGTTCTCTCATAAGCTTTCTCCTTGCTGATGACCA
GGATAGAGGCAGTGCTT
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